Pimephales promelas (fathead minnow): 120463280
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Entry
120463280 CDS
T08155
Symbol
mlh3
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120463280 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120463280 (mlh3)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
120463280 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
MutL_C
Motif
Other DBs
NCBI-GeneID:
120463280
NCBI-ProteinID:
XP_039508169
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All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MIKSLPQDVQAKLRSGIAIFSLQQCLEELLLNSIDAGATCVAVKIDIEACKLQVIDNGSG
MCQEDMERVGYRYNTSKCSSLEDLDNLRFYGFRGEAIASIVSLAEMVELSSRTKLSVKTY
VKTFNEASASDVLEAQTVRPSAGTTVSVYNLFHNMPVRRKRMDAVLEIERIRQRVEAISL
MHPSVSFTVKKENSAHMMVQLSKTSNTYYRFVQIHGLNRAQKLREVNYVHEQFEMTGYIG
REGHYNNSLQFLFVNERLLLKTCIHKTLNNLLKRVSGAARQNNSPTAYSLTSSPKQRGGC
DLHGVYVLNIKCHYSEYDICLEPAKSLIEFKDWDNVLICIEEGVKAFLTKENLVTEFSMN
GSDGPSSSPLRNAKTPVAEQNLSAEQTCEKCDALTEKKDNASGLEVSGGQMLEQVSINTE
TLSSEETDAEKALQGGDLHLQTTFAVATEMNNNRKEDENAICPNISQNALPVTVNNNNNI
NLMGSKKHKISILDVKGAQDSLKKFCFPNKMSSKKRKLPLNDIQEDKHVFYGTSSNTCRA
PPCHKLTLPFETGSLDKFKRLFGKDPEKEQPITEKQAFYNQNPLEDNDCFVGSTLCLDDT
DKPLLRNISDAYSPCNSECYAESSWNEGQKISLAAKCSFFKHDKMALREVSRDADFLTME
TLPFPVVQDSNIEEKSCELEKEDVFFGSFETVDSLFHDSSEDNPVFSLIEQDTAIPSSTL
EDPHFWNENVPSFLGSVSSVDEARVSSQHDPLCSNTGNEGQNTNDSVKTIPTSSSWLAHY
DSCLGKLVYINQVTGLSKYDSPPLEETQVSCTTDVTNMAVSVFSRTGFEYRCYPFHSDIV
LPFLPKPRAERALNSGTDSREDAQGPDSLSTLFSKWSNPVFIRPPEVSVDVTSGQAEDLA
VKIHNILFPYRFTKNMIHTMRVINQVDKKFLACLINTTEQDVSESSANEGNLLVLVDQHA
AHERVRLEGLVTDSYEDDPDTPGKKRLCSSSVTPPLEINVTEEELRLLRSCQAFLRGLAL
DVRFPKSESLNVFLERLPTCFIEKESTELRRGRRSVIKTIAEDYLREHIELLHSTGRARG
TLPLTVHNVLASQACHGAIKFNDILSKEECCSLVSSLSSCHLPFQCAHGRPSIVPLADLH
HLEDQQDLPKPNLRKLRRMYKSWQLYGKDQSLAQNKA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagtttgccccaagatgttcaagcaaagctgcgctctggtattgctattttc
tcattgcaacaatgtttggaggagctcctattgaacagcattgatgccggagcaacttgt
gtggcggtcaaaatagacatagaagcctgcaagctgcaggtgatcgacaatggctcaggg
atgtgccaggaggacatggagagagtgggataccgatacaacactagcaaatgcagctcg
ctggaggatctggataatctcagattttatgggttcagaggggaagcgattgccagtatt
gtctcccttgcagaaatggttgaattgtcatctaggactaagctgtctgtgaaaacatac
gttaaaacctttaatgaagcaagtgcgtcggatgttttagaagctcaaactgtccgtccc
tctgcagggacgaccgtgtccgtctacaatctcttccacaacatgccagtccgaagaaag
agaatggatgctgttttagaaatcgaacgcatccgtcagagagtggaggccatatctctg
atgcacccatctgtgtcattcacagtgaaaaaagaaaattcggctcacatgatggtgcag
ctctctaaaacaagcaatacctattacaggtttgtgcagattcatggcttgaatcgagcc
caaaagctcagagaggtcaattacgtccatgagcagttcgaaatgactggttatatcggt
cgtgagggacattacaataacagcttgcaattcctatttgtaaatgagaggcttcttctg
aagacatgcattcataaaacactcaacaaccttctgaagagagttagcggtgctgcgaga
caaaacaacagcccaaccgcttattcgttaacatcgagccccaaacaaagaggcggatgt
gatctccatggcgtctatgttttaaatatcaaatgccactactcagagtatgacatatgc
ctcgaaccagccaagtcactgatagagttcaaagactgggataatgtactcatctgcatt
gaagaaggagtaaaagcatttcttactaaggaaaatctggtgacagagttttccatgaat
ggcagtgatggtccatcaagtagtccattgaggaatgcaaagactcctgtggctgaacaa
aacctcagtgctgaacaaacatgtgaaaagtgtgacgcattgactgagaaaaaggacaat
gcaagtggtttggaagtctctggtggtcaaatgctggagcaagtgtcaataaacacggaa
accctttccagtgaagaaacagacgctgaaaaagctcttcagggtggcgatttgcacttg
cagaccacatttgcagttgctacagaaatgaataacaatcgcaaagaagatgaaaatgca
atttgtcctaatataagccaaaatgctttgccagttactgttaacaacaacaacaacata
aatttgatgggaagcaaaaaacacaagatttcaattctggatgtaaaaggggcgcaagat
agtttaaaaaaattctgcttcccaaataaaatgtcttcaaaaaaaagaaagctgccatta
aatgacattcaagaagacaaacatgttttttatggtaccagctcaaatacttgcagagct
ccaccatgtcataaattaactctgccttttgaaacaggatctcttgacaagttcaaaagg
ttgtttgggaaggatcctgaaaaagaacaaccaattacagaaaaacaagccttttacaac
cagaatcctctagaagataatgactgctttgtaggatctactttgtgcttagatgataca
gacaagcccttattgaggaacatttcagatgcgtattctccttgtaattctgaatgttat
gcagaatcttcatggaatgagggacaaaaaatatcactggctgccaaatgttccttcttc
aaacatgataaaatggcactcagagaggtcagcagagatgcagactttcttaccatggaa
acattgccttttccagttgtacaagactcaaacattgaagaaaagtcctgtgaattagaa
aaagaagatgtattttttggatcctttgaaactgttgattcgcttttccatgattcttct
gaagacaacccagtcttctctctaatagagcaggacacagcaataccttcctcaacttta
gaagaccctcacttctggaatgagaatgtgccttcctttttgggaagtgtgagcagtgtt
gatgaagccagagtatcctctcaacatgatcctctgtgcagcaacacaggaaatgaaggt
cagaatacaaatgacagtgttaaaacaatcccaacgtccagcagctggctggctcattat
gacagttgcttaggaaagctagtttacataaaccaagttacagggctcagcaaatatgac
tctcctcctttggaggagactcaagtgtcatgtaccacagatgtcactaacatggcggtc
agtgttttttcaagaacaggatttgagtacaggtgttatccatttcactcagatattgta
cttccctttctgcccaagcccagagcagaaagagctcttaactcagggacagacagcaga
gaggatgcccaaggtcccgattcattgtcgactttattctcaaaatggagtaacccggtg
ttcatacggcctccagaggtttctgtggatgtaacgagcggtcaagctgaggatcttgct
gtaaaaatacacaatattctgttcccctaccggtttaccaagaatatgatccacacaatg
agagtcatcaatcaagtggacaagaagttccttgcttgtttgataaatacaacagaacag
gatgtgtctgaaagcagtgcaaatgaaggaaatcttctagtgttggttgatcaacatgct
gcccatgaaagagttcgactggaggggttggtaacagactcttatgaggatgacccagac
acacctggaaaaaagaggctgtgttcttcaagtgtaaccccacccttggagattaatgta
actgaggaggaattgagacttctgaggtcttgtcaggccttccttaggggtcttgcttta
gatgtaaggttcccaaagagtgagtcactgaatgtgtttttggagagacttcccacatgt
ttcatcgagaaagaaagcacagagctccgccgtggaaggcggtcagtaattaaaaccatt
gcagaggactacctgcgagaacacattgagcttctccactcaacaggaagagctagagga
actctgcctctgacagtacataatgttctcgcttcacaagcgtgtcatggagcaattaaa
ttcaatgacattttgagtaaggaggagtgctgtagtctggtgagctcgctctcctcttgt
catcttcctttccagtgtgctcatggaagaccttccatcgtccctctggcagatcttcac
cacttagaagatcaacaggatcttcccaaaccaaatctgaggaaattgagaaggatgtac
aagtcatggcagctttatggaaaagatcaatctcttgctcaaaacaaagcatga
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