Pimephales promelas (fathead minnow): 120463330
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Entry
120463330 CDS
T08155
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120463330 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120463330 (tbpl1)
03021 Transcription machinery [BR:
pprm03021
]
120463330 (tbpl1)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
120463330 (tbpl1)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120463330 (tbpl1)
RNA polymerase III system
TFIIIB
120463330 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
120463330 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
P22_Gp10_C
Motif
Other DBs
NCBI-GeneID:
120463330
NCBI-ProteinID:
XP_039508275
LinkDB
All DBs
Position
Unknown
AA seq
186 aa
AA seq
DB search
MEPSNDVALDIIITNVVSVFRTRCHLNLRTIGLEGTNVIYKPEVGKVLMKLRKPRITASI
WSSGKIICTGATSEEEAKLGARRLARCLQKIGFKVRFSEFKVVNVLAVCSLPFQIRLIEF
TKNNRPIASYEPELHPAATYRIKNLRSTVQVFSTGSITVTGPNVQTVASAVEEIYPLLFE
CRKTLS
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggaacccagtaacgatgtggcgcttgatatcatcattaccaatgtcgtctctgtcttc
agaaccaggtgccatctaaacctgcgtaccatcggcctagaagggactaatgtcatctac
aagccagaagtgggaaaagtcctgatgaagctgcgaaaaccacgtatcactgcctctata
tggtcatcagggaaaattatttgcactggagcaacaagtgaggaggaagccaaactgggt
gctcgccgattggcccgctgtctgcagaagattggattcaaggtgaggttctcggagttt
aaggttgtcaatgtgttggctgtgtgctccctgccttttcaaatccgtctcattgagttc
actaaaaataatcgtcccattgccagctatgaacccgagctccatcctgctgcgacatac
agaatcaaaaacctcaggagtacagtgcaggtgttttccacaggcagtatcactgttaca
ggaccaaatgttcagactgtggcatctgccgtggaggagatttatcctcttctgttcgag
tgtcgaaaaacactgtcataa
DBGET
integrated database retrieval system