KEGG   Pimephales promelas (fathead minnow): 120463330
Entry
120463330         CDS       T08155                                 
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120463330 (tbpl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pprm03000]
    120463330 (tbpl1)
   03021 Transcription machinery [BR:pprm03021]
    120463330 (tbpl1)
Transcription factors [BR:pprm03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    120463330 (tbpl1)
Transcription machinery [BR:pprm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     120463330 (tbpl1)
  RNA polymerase III system
    TFIIIB
     120463330 (tbpl1)
  RNA polymerase I system
    SL1/TIF-1B
     120463330 (tbpl1)
SSDB
Motif
Pfam: TBP P22_Gp10_C
Other DBs
NCBI-GeneID: 120463330
NCBI-ProteinID: XP_039508275
LinkDB
Position
Unknown
AA seq 186 aa
MEPSNDVALDIIITNVVSVFRTRCHLNLRTIGLEGTNVIYKPEVGKVLMKLRKPRITASI
WSSGKIICTGATSEEEAKLGARRLARCLQKIGFKVRFSEFKVVNVLAVCSLPFQIRLIEF
TKNNRPIASYEPELHPAATYRIKNLRSTVQVFSTGSITVTGPNVQTVASAVEEIYPLLFE
CRKTLS
NT seq 561 nt   +upstreamnt  +downstreamnt
atggaacccagtaacgatgtggcgcttgatatcatcattaccaatgtcgtctctgtcttc
agaaccaggtgccatctaaacctgcgtaccatcggcctagaagggactaatgtcatctac
aagccagaagtgggaaaagtcctgatgaagctgcgaaaaccacgtatcactgcctctata
tggtcatcagggaaaattatttgcactggagcaacaagtgaggaggaagccaaactgggt
gctcgccgattggcccgctgtctgcagaagattggattcaaggtgaggttctcggagttt
aaggttgtcaatgtgttggctgtgtgctccctgccttttcaaatccgtctcattgagttc
actaaaaataatcgtcccattgccagctatgaacccgagctccatcctgctgcgacatac
agaatcaaaaacctcaggagtacagtgcaggtgttttccacaggcagtatcactgttaca
ggaccaaatgttcagactgtggcatctgccgtggaggagatttatcctcttctgttcgag
tgtcgaaaaacactgtcataa

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