Pimephales promelas (fathead minnow): 120463430
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Entry
120463430 CDS
T08155
Symbol
arhgef40
Name
(RefSeq) pleckstrin homology domain-containing family G member 4B
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120463430 (arhgef40)
Membrane trafficking [BR:
pprm04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120463430 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
Motif
Other DBs
NCBI-GeneID:
120463430
NCBI-ProteinID:
XP_039508467
LinkDB
All DBs
Position
Unknown
AA seq
1747 aa
AA seq
DB search
MGSEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDFFIPAKHLLH
RLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLHSTDFYLQVVPFSTRCPRLA
LKCLAPGGRNVQEVLVPESQHPLVFTSEWLHCINKERGCKREGGGCLDTCLVSTCDGVVR
IPWEEVVYPKLLHNPSDPLQDNPDPSDLSSGGVVLGWGGSSVEHDSWSWDEEDDLPPDGN
EAEIEAALECLRRSSDDHLVGDGAGDYVELLEPRGGPDGGADPKQRYLEMHGICKTKTLP
LCRRGKAIRLRKGKGRGYGRIEPGARAGSLVRRDSNNNAKDGVVSCSDLATSRPLPRVID
LGRQRRSYSPSFLDSDEGAKDTVGLEFRSRCMDNPAKERKPGVGKEREGTGGTLRKRGSS
RQRSIDENDLAKNNAESLGEGQQDHSQRSHCACDNNILDSTLNSRHELATVTNPSDSADN
GTIPLAAYEETAGINKQSGQSRTSTTSLRDSSVNNASDSSGCAQSRTKHSDNTSDEKTDT
ILPPSGTMSTMGEKRVGKSENFVCPRGKEVKTGGFRAPRRKRKAKGGKGKAKSNGRVQHK
GKGDQVISKTQSKTIHPISHSSQLEDVPQLSKDCKVCVTATDAETDAKSKAKEGESQSGT
SFPDHSQKEMGLYESAPQGESKSPPPHLRDLDFNLLQSGKLKLTGTMDRLGRALVFTESH
LPEDGWNTDEMIKVLSCYYTVTRPMAKEKGLTVIVDSRKSAPSELCLSALKLFKEQTPTG
LDSILILTEEQEELTQPGLDGIEVHLVRGTGILQQFVDQQQLPREMGGDFNHSHDDWLTF
RLSLEQLTECCECALTLLGDTLQSMDTEPLPDSIKNVPCSADKHKQLMTSILTDQRLTEL
QQKGGAWLAGLANGTSGLAQKSPDCKAALAVTSNLYDSVDDALHRLVRVSNQRGRDLEAL
GRLATLVDKLDKCERDIEHIQEQLEDYKHPPLSLSRLSLKQHKFKSFRDTAMELHSETLV
LLAEVESWSELDWSGLRTVLDKLPPIRERVRDMSHLLSDCWTQLDNTQRLLSTLTEASQW
CDVVSSSSPSSSSSSPLSSLPPIPPSRFQDARALALELGGGALLDLWSQTLERYQKTLAQ
FKSRILQAERGSSTAQGQEQDSGGRGRTPAPRTSSLGDLEGEIEPDWCPGVEGGMQSWGS
LASLFRPQNCSTLKIGEEKKKDGVNPGGGTFLQNLLHPAKKNPTDAPLPPKPPRKRHPSF
DLQALLAPRRSAAVSKPAESTSGQSSPLSWLGRRALTDPILTAGVTAAVPGWRDPTGGGG
VLIRGVEVSSKEVADHTGFTRQHVLLSRTERETGVERAGATAQSKLYLQWCRLVSTERQY
VAVLKAVEENYLPLLESSDVPSTLRGKTESFFSNWKSLSAFHTQLLLPAMEGALSQTLQQ
TDCFSKYKDQFFLYSHYIRMRPESDALLISQAADFFRSKLSSSLVPAPPFPQCLSTPIQR
LEQYCQTLEELGGLNPTSDSPLSILRHAQRHGADLRASDLITGCLIPVAERGELVRQGEL
CVCGGGRRKKTGIRNVFLYQNYVIFTKHKTPNPGCSVYSFKHSIKTGEMGLTQSVGEDGL
RFEVWVRQVSRTRDCLTLQAASVQERGAWTHDIAQLLWTHAIHNTELCLKESLCMGVSSK
LLLDVTGAQVSELDSSFSLNDRVQSSCSDSSSVGSMKGGDSPASARDSKRNSEQTGHTQS
TSPSTSV
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagaggcggtagaggactgtgtgcagggggcactatcctctctctatcctcct
tttgaaagcactgctcctcctcttctctctcaggtgttctccgtacttgagtccacctat
cagcatgacagcttgagatatctgctggatttcttcattcctgcaaagcatcttctccat
agattacagcagcatgcatgttctcagtatctaggctgtctcttcttgcactctggttgg
ccactatgtttgggagagaaggtagtagtacaactctctactttggactggagactcctg
catagtactgacttctacctccaggtggtccccttctcgacacgttgccctcgccttgct
cttaagtgccttgcacctggtggtcgaaatgtacaggaggtcttagtgccagaatcacag
cacccgctggtgtttacttctgagtggctacattgcatcaacaaggagcgtggctgcaag
agagaaggtggaggatgtttggacacctgtctggtgagtacatgtgacggagtggtccgt
attccatgggaagaggtggtctatcctaaactcctgcacaatccatccgatcctctccaa
gacaatcctgacccatctgacttgtcatcagggggtgtggtcctcggttggggtggatct
tcagtagagcatgattcctggtcttgggatgaagaggatgacttgcctccagatggtaat
gaggcagagattgaggccgcattggaatgtctgcgcagaagcagtgatgaccaccttgta
ggtgatggtgctggagattatgttgagttgctagagcccagaggaggaccagatggtggt
gctgatcctaaacagcgctatctggagatgcatgggatatgtaagaccaaaacattaccc
ctgtgtcggaggggtaaagcaatacgactacgaaaggggaaggggagagggtatgggagg
attgaacctggtgctagggctggaagtctggtacgaagggatagcaacaacaatgctaag
gatggtgtagtttcctgcagtgacttggctacctcacgacccttgccacgtgtcattgat
ttaggtcgccaaaggaggtcatattccccttcgtttctggactctgacgaaggtgctaaa
gacacagtagggctcgaattcagatcccgttgtatggacaatccggccaaagagaggaag
ccaggggtaggaaaagagagagaggggactggaggtacactgagaaaaaggggttcaagc
aggcaacgttccatagatgaaaatgatttggcaaagaacaacgcagagagtcttggagaa
ggacaacaggaccacagtcaaagatcacactgtgcctgtgataataacatattggacagc
actttaaacagtagacatgagcttgcaacagtaacgaatccctccgactctgcagataat
ggcactatcccattggctgcttatgaggaaacagcaggcataaacaagcaatcaggacaa
tctaggacaagtacaacatccctccgagattcttctgtgaacaatgcatctgattcatca
ggttgtgcgcaaagcagaaccaaacattcagacaataccagtgatgagaaaacagataca
atcctgccaccatcaggtactatgagtaccatgggagaaaagcgtgttggaaagtcagag
aactttgtttgtcctagaggaaaagaagtaaaaacaggtggattcagagctcccaggagg
aaaaggaaagccaaaggaggcaaagggaaggccaaatccaatggtcgtgtccaacataaa
ggcaagggtgaccaagtcatctcaaagacccagagcaaaaccatccacccaatcagccat
tctagccaattagaggacgttcctcagctatccaaagattgcaaagtctgtgtaactgcc
actgatgcagaaacagatgcaaagtcaaaggccaaagaaggagaaagccagtctggcaca
tcctttcctgaccattcccaaaaagagatgggattatatgaatctgctcctcaaggggag
tccaaatccccccctcctcatcttagagacttagatttcaatcttctgcagtcaggaaag
ctaaaattaacaggtactatggatcgactgggacgagcattggttttcacagaaagtcac
ctcccagaagatggctggaacacagatgaaatgatcaaagtgttgtcctgctattacacc
gtcaccagacctatggccaaagagaagggtcttaccgtgatagtggacagcagaaagtct
gcgccatctgaactctgtctctctgcactgaagctcttcaaggagcagacaccaacaggc
cttgattcgattcttatcctaacagaggaacaagaagaattgacccaaccgggtctggat
ggaatagaggtgcatttagtaagaggtacgggcatccttcagcagtttgtggaccagcag
cagttgcccagagaaatgggtggagactttaaccactcacatgatgactggctcactttc
agactgagtttggagcagttgactgagtgctgtgagtgcgccctcaccctgctgggagac
acactgcagtctatggacacagaaccactacctgacagtattaagaatgtcccctgcagc
gccgacaaacacaaacagttaatgacaagtattctgactgaccagcggctgacagagctt
cagcagaagggtggggcttggctggcaggtctggcaaatggtacatcagggttggcacag
aaatcaccagactgcaaggctgctttagcagtgacctctaacctatatgacagtgtggat
gatgcgcttcaccggctggtgcgtgtgtccaatcagaggggtcgtgacctcgaagcactg
gggagactggctacacttgtggataaactggacaagtgcgagagagacatagaacacata
caggagcagctagaggactataaacaccctcctctgtctctcagcagactgtcactcaaa
cagcacaagtttaagagcttcagagacactgctatggagcttcacagtgagactctggtg
ttgctggcagaggtggagagctggtctgagctggattggtctggtcttagaaccgtgctg
gacaaacttcctccaataagggaaagagtgcgagacatgtctcaccttctgtcagactgc
tggacacagctggacaacacacagcgactactgtctacacttactgaggcatctcagtgg
tgtgatgtggtgtcatcctcctctccttcctcttcctcgtcctctcctctctcctctctt
cctcctatccctccatcacgtttccaggacgctcgtgctcttgcactggaactgggggga
ggggctttgttggacctctggtctcagactctggagcgctatcaaaaaacactagctcag
tttaagagccgaatcctgcaggcggaaagaggttcgtctacagcccagggtcaggaacag
gactctgggggacgaggaaggactcctgcccccagaacctccagcttgggggatttagag
ggggaaatcgagccggactggtgccctggagtagaggggggcatgcagtcctggggttca
ctggcgtctctcttccggccacaaaactgctcaacactcaagatcggagaggagaagaag
aaagatggggtgaatccaggagggggaacgtttctgcagaatctgctgcacccagccaaa
aaaaatcccacagatgcaccactccctcccaaaccccctcgcaagcgccatcccagtttt
gaccttcaggctctgctggccccgcgccgttcagccgccgtgtctaaacctgctgagtcc
acttcgggtcagtcttctccgctatcctggctgggccgtcgggctctgacagatcccatc
cttacggcgggagtgacagcagcagttccaggatggagggatcctactggaggaggagga
gtgctcataagaggagtggaggtcagcagtaaagaagtggcggatcatactggcttcacg
cgccaacatgtgcttctcagccgcactgaaagagagacaggggtggagagagcaggagca
accgcacaaagcaagctctatttacagtggtgtcggctggtcagcacagagaggcagtat
gtcgctgttcttaaagctgtggaggaaaactacttgccccttctagagtcttcagatgtc
ccatctacactgagaggaaagacagagtcattcttcagtaactggaagagtctctctgcc
ttccatacgcagttactcctcccagccatggagggcgctctctcccagacactacagcag
accgattgttttagtaaatacaaggatcagttctttctatattcccactacatccgaatg
agacccgagtcggatgctctgctcatcagtcaggctgctgacttcttcaggtcaaagctg
tcttcctctcttgttcctgctcctccatttcctcagtgtctctccactcccattcagaga
ctggagcagtactgccagacactagaggaactgggcggtcttaatcccacttcagactcc
cccctctccatcctaagacacgcccagcggcatggagcagatctgcgagccagtgatctc
atcacggggtgtctaatacctgtggcggagcgtggagagctagtgcgtcagggtgagctg
tgtgtgtgcggtggaggcagacggaaaaagacaggaatcagaaacgtcttcctctatcag
aactacgtcattttcaccaaacacaaaacacccaacccgggatgcagtgtgtacagtttc
aaacacagcattaagacgggtgagatgggcctcactcagagcgtcggggaagacggactg
aggtttgaggtgtgggtgagacaagtgtctcgcaccagggactgtctcactctccaggct
gccagcgtgcaggaaagaggagcttggacccacgatatcgcacagctgctctggactcat
gccatccataacacagagttgtgtctgaaggagtctctgtgtatgggagtttccagtaag
ttgctactggatgtgacaggagctcaagtttcagaactggactccagcttcagcctgaac
gacagagttcagagcagttgttcagattcatcttctgtgggcagcatgaaagggggcgac
tcacccgcctctgcaagagattcaaagagaaacagcgagcaaacaggacacactcagagc
acttcaccctccacttctgtctga
DBGET
integrated database retrieval system
