Pimephales promelas (fathead minnow): 120463453
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Entry
120463453 CDS
T08155
Symbol
nr1d4a
Name
(RefSeq) nuclear receptor subfamily 1, group D, member 4a
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120463453 (nr1d4a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120463453 (nr1d4a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120463453 (nr1d4a)
Nuclear receptors [BR:
pprm03310
]
1. Thyroid hormone like
1D. Rev-Erb
120463453 (nr1d4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120463453
NCBI-ProteinID:
XP_039508503
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All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MLSPDFNILTQTDFLQDNISEDRGSLKSISMMDSPGSVILYAGTNGSACPSPGSPSSGYQ
TQSPSSHSQPSSPDEVTFTEIGALKQQGSIGSPPSPKRVFQFPEIYNNSTAGSNPHSYSH
PIAGKRPCGFTGTFTKTGGMVLLCKVCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKM
CVKNENCLIMRMNRNRCQHCRFKKCLSVGMSRDAVRFGRIPKREKQRLLDEMQSYMNSLN
ESSTMGMETSPPREPPQSPSENQSKEAIGALSRAYQNIFTNTQDHLSKRAGNSGTNTFQN
NPSQDGNYPHANSLTGYHATTHESFSAPPRCPVPSSDSKCPVSLVDNSRYSYAPSFNQNH
SQSSVSLPSQPTHDDYNSYAAGESQSQASCPFKLAAGSKVLACPLNACPVSAPGVSSQQV
WESFSQCFTPAVREVVEFAKGIPGFQELCQHDQVMLLKAGTFQVLMVRFSSLFNHKERSL
TFLNGQTYPLGTLRGLGMGSLLDAMFEFSSSLSCLGLESDELALFMAVVLVSADCSGILD
FVAVEQLQEGLIRALRTLVNRRRPDDNSLFSKLLLRLPDLRTLNNLHSDKLLAFRIDP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaccagactttaacatactgacacaaacagactttcttcaagacaatatttct
gaagacagaggatctttgaaaagcatatcaatgatggatagtcctgggagcgtgatactc
tacgctggtaccaatggcagtgcctgtccaagcccaggaagcccctctagtggctatcaa
acccagtctccatcttcccactcccagccctcttcaccagatgaggtcaccttcactgag
attggggccctcaagcagcaaggaagtattggatcgccaccttctccaaaacgggtcttt
cagttccctgaaatctacaataactccacggcaggatcaaacccgcacagctactcccat
ccaatcgccggtaaaaggccttgtggattcactggcacgtttaccaaaactggaggcatg
gtgctcctttgtaaagtatgtggagatattgcatcagggttccactatggtgtccatgca
tgtgaaggctgcaagggctttttccgccgtagcattcagcagaacattaactacaagatg
tgcgtgaagaacgagaactgcctgataatgcgcatgaaccgcaaccgctgccaacactgc
cgcttcaaaaaatgcctgtctgttggcatgtcccgcgacgctgtgcgtttcggccgcatc
cccaaacgagagaagcagcggcttttggatgagatgcagagctacatgaacagcctcaac
gaatcgtccaccatgggcatggaaacctcaccaccacgtgaacctcctcaaagccccagc
gagaaccaatccaaagaggctattggtgccttatcccgagcctaccagaacatcttcaca
aacacgcaggaccacctaagcaagcgtgcgggcaacagcggaacgaacacctttcaaaac
aacccttctcaggacggcaactatcctcatgcaaactctctcacagggtaccacgcaact
acccatgaaagcttctcggcaccgcccagatgcccagtcccttccagcgacagcaaatgc
cccgtctcattggtggacaacagtcggtacagctacgcgccttcattcaaccaaaatcac
tcccagtctagcgttagcctgccctcacaacccactcacgatgattacaacagctacgcg
gccggcgagtcccaaagccaggcctcgtgtccgtttaagttggctgctggctccaaagtg
ctggcttgtccactgaacgcatgccccgtgtcagcaccgggtgtctctagtcagcaggtg
tgggagtctttctcacagtgctttacgccggctgtacgtgaagtggtcgaattcgcaaag
ggcattccaggcttccaggagctctgccagcatgatcaagtcatgttgctcaaagcaggc
actttccaggttcttatggtgaggtttagctcactgttcaaccacaaggaacgatcactg
actttcctgaatggacaaacatacccgctgggcacccttaggggtcttggtatgggctcc
ttgctggacgccatgtttgagttcagttcctcgctgagctgtctgggcctggagtcagat
gagttggcactcttcatggctgtggtgctggtttctgcagattgctctggcattttggat
tttgtggctgtcgaacagttacaggaaggactcatccgagcgctgcgcaccttagtcaac
cgccgccgtcccgacgacaactccctcttttccaaactgctcctgcgtcttccagacctg
cgcactctcaacaaccttcactccgacaagctgctggccttccgtatcgatccctga
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