Pimephales promelas (fathead minnow): 120463676
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Entry
120463676 CDS
T08155
Symbol
cntn3a.1
Name
(RefSeq) contactin-4 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120463676 (cntn3a.1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprm00537
]
120463676 (cntn3a.1)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
Contactins
120463676 (cntn3a.1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprm00537
]
Others
120463676 (cntn3a.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set_CD47
fn3_2
Tissue_fac
Fn3_nematode
Interfer-bind
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
120463676
NCBI-ProteinID:
XP_039508879
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MGLSWKLLVLQLFMGCLSEGSGPLRPVFTKQPGSIVFPLHLNEPSREVTFSCEAQGHPSP
SYRWKMNDSFISPQPGSRYSISGGNLRISQLNKEEDAGIYQCLASNSFGTILSREASLHI
AYLDEFKTQRRSAVSVREGQGVVLLCGPPSHMGELTFSWIFNEYPSFVKQDTRRFVSQKT
GNLYIAKVEPSDVGNYTCVVTNTVTQSRVQGPPTPLILRSDGIMGEYEPKIEVQFPEVLA
VAKGLTVKLECFALGNPVPAISWKRPDGVPFPRKVDISTSSGVLEIPYFQQEDAGPYECM
AENSRGKNTVKGRLSFYAPPHLLEMPQDVQKAIDESLLWECKASAKPKPAYRWLKNGEAI
ESFEDRVQVVNGALSISSLTLADTGMYQCIAENRHGRVFANAELRAIAVAPDFSNSVLKA
QTLARQGGDVLIECKPRMSPRGMISWRKGKEALRESHRVSVLDNGSLRISNITKLDAGLY
TCVARNQFGVASSAGTLVVKDPTIITSKATQLDVTVGESVVIPCQVSRDPSLDLRFTWFF
NEQLINFGSHGGYFEKVGGTSAGDIMIRNIQLRHAGRYTCAVQTKVDSASIATDVVVRGP
PDPPLDIKVDEVTETTSFMSWSPGPDNRSPVFAYNIQIRSPFSLGWQAAKTVPESLGGQQ
LTSRVVELSPWVEYEFRVLATNAIGTGEPSKPSQKIRTKDTLPRATPARVSGGGGSRSEL
VITWEPVPEELQCGPGFGYVVAFRPLGGQSWMQAAVTSPDASRYIFKNESIPPFSPFHVK
VGVYNNKGEGPFGPVTTIYSAEEEPSRAPSRIRAKSLSASEVEVSWKPLPWSTSRTRIMG
YELRYWSTKDRADTASVMRTVGNRTSAVIRGLDPSSTYHIKLKAYNSAGVGPDSAVVNVT
TKRPPPSQSPVKVMWNTTDSKLILKWDHVKALENESEVMGYKVMYKQSTHSRPSVVETNS
TSLELSLPVDEDYIIQIKPVSEGGEGSSSKQITIPRIAVAHAIGFAPERKALPLLVTLLL
YCTVRTFL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggggttgtcatggaaactgctggtgctgcaattattcatgggatgcctttcagaaggc
agcggtcctctgaggccagtattcaccaaacagccgggaagtattgtattccctctccat
cttaatgagcccagtcgggaggtcaccttcagctgtgaagcccagggacatccgtccccg
tcctacaggtggaaaatgaacgacagcttcatttcccctcaacctggctctcgatacagc
atctcaggaggaaaccttcgaatcagccagctcaataaggaagaggatgctggtatttac
caatgtctggcctccaactctttcgggaccattctcagcagagaagctagtcttcacatt
gcttatttggacgagtttaaaacccagaggagaagtgcagtgagtgtcagagaggggcaa
ggtgtggttcttctctgtgggccaccatcacatatgggagagttgaccttttcttggatc
ttcaacgaatatccctcatttgtgaagcaagacacgcggcgctttgtgtcacagaaaaca
ggcaacctgtacatcgctaaagtggagccgtcagatgtgggaaactacacttgtgtcgtg
actaacactgtgacccagagcagagtgcagggacctcccacgccacttatactccgcagt
gatggcattatgggagaatatgagccaaaaattgaggtccaatttcctgaagtcttggcc
gttgccaaggggttgacggtaaaactggagtgcttcgccttgggaaatccagtgcctgct
atcagctggaaaagaccagacggagttccttttcccagaaaagtggacattagcacatcc
agcggagtgctggagatcccttatttccaacaggaagacgcagggccatatgaatgcatg
gctgagaactccagaggcaaaaacacagtcaagggacggctctccttctatgcaccacct
catctgttggagatgcctcaggatgtgcagaaagccattgatgaatctctgctgtgggag
tgtaaggcgagcgccaagcccaaacccgcctacaggtggctgaagaacggagaggcgatc
gagtcatttgaggacagggtccaggtggtaaatggggcattatccatcagcagtcttacc
ctggcagatactgggatgtaccagtgtatcgctgagaaccgtcatggccgggtgtttgcc
aacgctgaactcagagccattgcagtggcaccagatttctccaacagtgtgctaaaggca
cagacattggctcggcagggtggagatgttttgattgagtgcaagcctcgcatgtctcca
cgcgggatgatctcctggaggaagggcaaagaagccttgcgagagagccacagagtctcc
gtgctggataatggcagtctccggatatccaacatcaccaaactagacgcaggtctttac
acttgtgtggcgagaaaccagtttggagtggcaagcagtgcaggcacactagtggtgaaa
gacccaaccatcatcacttctaaagccacccagctggacgttacagtcggagagagtgtt
gttatcccgtgccaggtgtcacgtgacccctccctggacttgagattcacctggtttttc
aatgagcagttgatcaatttcggaagccatgggggatatttcgaaaaagttggtgggaca
tctgctggtgacattatgatccgtaacattcagctaaggcatgcaggaaggtacacatgt
gctgtacagactaaagtggacagtgcgtctatagcaacagatgttgtggtacgaggtccc
cctgacccaccgctggacatcaaagttgatgaagtgacggagacaacatcctttatgtcc
tggagtccaggccctgataaccgcagtcccgtcttcgcttacaacattcagatccgaagc
cccttctctctcggatggcaggcggccaaaacagtgccagagtctctgggagggcaacag
ctgacatcccgtgtggttgaattgagtccgtgggttgaatatgagttcagagtgctggcc
accaatgccataggcaccggggaacccagcaaaccctcacaaaaaatcaggaccaaggac
acattgccaagggcgaccccagccagagtcagcggaggaggtggcagtcgctctgagctt
gtcatcacttgggagccagtcccagaagagctgcagtgcggtccaggtttcggctacgtg
gttgctttccgccctctcggtggtcaaagctggatgcaggcggccgtgacatctcctgat
gcatctcgatacatcttcaaaaacgagagcatccctccattctctccatttcatgtgaaa
gtgggagtttacaacaacaaaggagaaggtccttttggacccgtgaccactatctactca
gcagaagaggagccgagtcgcgcccccagtcgcatccgtgccaagagcctgtcagcctca
gaagtggaggtcagctggaagcctttaccctggagcaccagtaggacacgcataatgggc
tatgagctgaggtactggagcacgaaggacagagcggacacggctagtgtgatgaggact
gtgggaaacaggacgtctgctgtcattcgtggactggaccccagcagtacataccacatc
aaactcaaagcctataacagtgctggtgtgggacctgatagtgccgtggtgaatgttacc
accaagagacccccgccgagccagtctccagtgaaagtcatgtggaatactacagactcc
aaactcatcctcaagtgggaccatgtgaaggctctggagaatgagtctgaagtaatgggc
tacaaggtcatgtacaagcaaagcacacatagtcggcccagcgtggtggagactaacagc
acatctctcgaactctctctgcctgtggatgaggattacatcatccagattaaaccagtc
agtgaaggtggcgagggaagcagcagcaaacagattaccatccccaggatagcagttgca
catgcgattggatttgccccggagcggaaagctctccccctgctcgtaacactattactc
tactgtacggtcaggactttcttatga
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integrated database retrieval system
