Pimephales promelas (fathead minnow): 120463701
Help
Entry
120463701 CDS
T08155
Symbol
zgc:193690
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
pprm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120463701 (zgc:193690)
03015 mRNA surveillance pathway
120463701 (zgc:193690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120463701 (zgc:193690)
Enzymes [BR:
pprm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120463701 (zgc:193690)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120463701 (zgc:193690)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
120463701
NCBI-ProteinID:
XP_039508915
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSTDSWALAVDNQESTPKSIQNSRILEAGNLAWTNVSPHVDDADKPEEEEKGSLKEDKAT
QSLLNKLIRSNVVNNTNQVEVLQRDPNSPLYSVKTFEELRLKPQLLKGVYEMGFNRPSKI
QENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPGLKWPQCLCISPTYELALQT
GKVIAQMGKFYPEVKLAYAVRGHKMERGVKIKEQIVIGTPGTVLDWCVKLKLIDPKKIKV
FVLDEADVMIATQGHQDQSIRIQRMLSKGCQMLLFSATFEDSVWKFAERVVPDPNIIKLK
REEETLDTIKQYYVLCNCKEDKFNALCNIYGAITIAQAMVFCHTRKMANWLSAQLSKEGH
QVALLSGEMVVEQRAAVIERFRHGKEKVLITTNCCARGIDVEQVSVVINFDLPLDKDGNP
DNETYLHRIGRTGRFGKRGLAVNMVDSQRSMEILKTYERHFNKKILRLDTDDLDEIEKIA
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgattcgtgggctttagccgtggacaatcaagagtctacacccaagtctatc
cagaactcgcggattttggaagcgggaaatttagcttggactaatgtttcccctcatgta
gatgatgctgacaaacccgaagaagaggaaaaaggtagtctaaaagaggacaaagccaca
cagtctctcctgaataaattaatcagaagcaatgtggtcaacaacacgaaccaagtggag
gttcttcagagagacccaaactcaccactgtattcagtcaagacttttgaggagctgagg
ctgaaacctcagttgctcaaaggcgtctatgaaatgggcttcaacagaccttctaaaatc
caagagaatgcccttcccatgatgctcgccgaaccacctcagaatctgatcgctcagtct
cagtctggcactggtaaaacagccgccttcgtgctggccatgctcagtcatgtggacccg
ggcttaaaatggcctcagtgtttgtgcatttctcctacatatgagctcgctctgcagacg
ggtaaagtcatcgcgcaaatgggcaagttttatcctgaagttaaactggcatatgctgtt
cgaggacataaaatggagcgtggcgttaagatcaaggagcagatcgtcatcggcacacct
gggacggttctggactggtgcgtcaagctcaagctcatcgacccgaaaaagatcaaagtg
tttgttctggatgaggctgatgtcatgatcgccacacagggacaccaagaccagagcatc
cgcattcagagaatgctgtccaaaggctgtcagatgttacttttctctgccacctttgag
gactctgtgtggaagtttgccgagcgtgtcgtgccggatcccaacatcatcaagctaaaa
cgtgaagaggagacgctggacactatcaagcagtattatgtgctctgcaattgcaaggag
gacaaattcaacgcgctctgtaacatctatggagccatcactatcgcacaagctatggtc
ttctgtcatactcgaaaaatggccaactggctttccgcccagctgtctaaagagggccac
caggtggcgctcctcagcggggaaatggtggttgagcagagagcagcggttattgaacgt
ttcagacacggcaaggagaaagttctcatcactactaattgttgtgcaagagggattgat
gttgaacaagtgtcagtggtgatcaactttgaccttcctctggacaaagatggcaatcca
gacaatgaaacgtacctccaccggatcggtaggactggacgctttggcaagagaggactc
gctgtcaacatggtggacagtcagcgcagcatggagattctcaagacatacgagaggcat
tttaataagaaaattttgaggctggacacggatgatctcgacgaaattgaaaaaatcgcc
aactga
DBGET
integrated database retrieval system
