Pimephales promelas (fathead minnow): 120463831
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Entry
120463831 CDS
T08155
Symbol
her9
Name
(RefSeq) hairy-related 9
KO
K06054
hairy and enhancer of split 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03460
Fanconi anemia pathway
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120463831 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120463831 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120463831 (her9)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120463831 (her9)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
120463831 (her9)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
120463831 (her9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
Amelotin
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
120463831
NCBI-ProteinID:
XP_039509102
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MPADNMEKQTASPIAGAPASGSHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALSADTNVLGKYRAGFNECMNE
VTRFLSTCEGVNTEVRSRLLNHLSGCLGQMMAMNYGQPAPSQQQAHLAQPLHVQLPSTLP
INGASMGSKLSPSEAVSPKVFGGFQLVPATDGQFAFLIPNPAFASATTPVIPLYANAGVP
VAVNASPVQACSAPTAASPVHGMTSFAGVSRAVSPVGVSAGAESNEPVWRPW
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgataatatggagaagcagaccgcgtcacctattgctggtgcccctgccagt
ggatctcacactccggataaaccaaagaacgccagcgagcacagaaagtcttcaaagcca
atcatggagaaacgccgcagagcgcgaattaacgagagccttgggcagctgaagacccta
atactcgatgctcttaaaaaagatagctccagacactctaaattggagaaagctgatatc
cttgagatgacagtcaagcacctgcgcaatttgcagcgtgttcagatgaccgcggccctg
tcagctgacacaaacgtcctcggcaaataccgcgcaggattcaacgagtgcatgaacgag
gtgactcggttcctctctacctgcgagggggtgaatacggaggttaggtcgcgacttctc
aaccacctgtctggttgtttgggacagatgatggccatgaactacggtcaacctgcccca
tctcagcagcaggctcatttggctcagcctcttcacgtgcagcttccttcaactttgccc
atcaacggcgcctcaatgggctccaaactcagtccttcagaggcggtctcacccaaagtc
tttggaggattccagctggtgccagccaccgacggacagtttgcttttcttatccccaac
ccagctttcgcgtctgctacaacaccagtcattcccttgtacgcaaacgcaggtgttcca
gtggctgtcaacgccagtcccgtccaggcctgctccgctcccacggcggcctctcccgtg
catggaatgacctccttcgccggcgtttcacgggccgtcagtcccgttggtgttagtgcc
ggagcagaaagcaatgaaccggtgtggagaccttggtag
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