Pimephales promelas (fathead minnow): 120463940
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Entry
120463940 CDS
T08155
Symbol
myof
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120463940 (myof)
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Others
Ferlins
120463940 (myof)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
Pex24p
Motif
Other DBs
NCBI-GeneID:
120463940
NCBI-ProteinID:
XP_039509141
LinkDB
All DBs
Position
Unknown
AA seq
2065 aa
AA seq
DB search
MLRVAVESAAGLPKKKLGSPDPIASVVFKDEKKKTKSISNELNPVWNETLEFDLKGVPLD
SSSYIDVLVKDHETLGKDKLIGSAKVSLKDLASSQVKSLPVKNLALVDENGKGIGGTISM
MIGYEPPAGAVTNPQDQQDGSMGGNTAGGEEGDSTDSGAPGAATSPGEPGQKLRTRTRKR
HNLANKPQDFQIRVRVIEGRQLPGNNIKPVVKVHVCGDTHRTRIRKGNNPYFDEIFFFNV
NMLPSELFDEVVSFRVYNSSSFRSDCLMGEFKLDIGYIYDEPAHCIMKKWVLLSDPDDSS
SGAKGYIKVSMFVLGTGDEPPVERKEEDNDKDDVESNLLLPAGVALRWVTLKLKVFRAED
VPQMDDSITQTLKAAFGGEENKKNLVDPFVEACFAGKKLCTQIIEKNANPEWNQQLNLQV
KFPSMCERIKLTVFDWDRLSGNDAIGTTYLDLSKIASSGGEVEEDYPGDEFSAKKGETGE
SEMGFLPTFGPCYICLYGSQREFSGLPDPYDDLNLGKGEGAAYRGRVLVELSTKLDGKPD
KSVEEISSDDILVVQKYQRRRKYCLCAVFHSATMIQEPGEPIQFEVSIGNYGNKMDQTCK
PLASTTQYSCAVFDGNNYYYLPWGDTKPVISITSFWEDISHRLDSLNIILYISNRLQTNL
SMLKSAVLSKATDARLVEIWLKLINQLMEDITSLKIPDLEGKPNLTALDIQIKKLRDSAL
ESIMEGAKHLFEEATDVTKCLSIIETWLDKLLKLAEEPQNSMPDVIIWMLRGEKRVAYTR
IPAYQVLHSSYCEQACGQFCGKNQTVFMQYPMDDKKGLKIPVQIRVNMWLGLATEEKKFN
NYAEGIFNVFAELYENQAQVLGKWGTTGLLNRSKFSDVTGKVKLKQEYFMPPVGWEWEGD
WRVEPEKTLLIEADAGHTEFVDEVYENETRFPGGEWKLAAEPYTDVNGEKVQSPTEIECP
PGWKWEDNWTFDGNRAVDEKGWEYGVTIPPDDKPKSWVAAEKMYHVHRRRRMIRPRKRIP
GVKTATDKKDAGDAEGWEYSSLIGWKFHRQQRSSDTFRRRRWRRKMAPSGRVGASAIFKL
EGALGVDMESKVEEKGTKAEASVQQFGANRPTVSCTFDGPNAYHLRVYVYQARNLFALDK
DSFSDPYVHVSFLHNSQTTETIRSTLNPTWDQTLIFKNVEIYGDPQSLAQNPPRVVMEIF
DNDQVGKDEMLGRSTCVPLVKLTSGEDGSPKLLWEPVMYKNAPAGEVLVAAELILKTKGN
DTELPLAPAKRGEKLYMVPQGVRPVVQLTAIEVLAWGLRNMKTYQLAPVTSPSLVVECGG
ESVQTAVIKNIKKCPNFQGNVLFFKVLLPKEEIYAPPIVLKVIDHRPFGRKPVVGQCTIS
SLEEFRCDPYVTVADVALSSKMSLMAAGPRDLHVNIDDDRQHLLEAQYMYGISAAVDKMG
TASQLQREKEKETVDWWSKFYASVGQSEKCRPYLDKGYDTLQVYDCELESVNEFMGLTDF
CKTFKLQRGKKECDDDDDPAVVGEFKGSFKVYPLPDDPGVAPPPRQFRELPDSVSQECVV
RIYVVQAIDLQPKDNNGKCDPYIKISLGKKSIEDRDNYVPYSLNPVFGRMFEMTCFLPQD
KDLKIAVYDFDLLTRDEKVGETVIDLENRFLSHFGSYCGLPQTYCVSGLNQWRDQLKPSQ
ILEHHARLKGLSRPRSEDNGNTLSFGGRLYSLSDFEANKKIHEHLGPPSERLALHVLRTQ
GLVPEHVETRTLLSSFQPTLPQGKLQMWVDIFPKSLGPPGPPFDISPRKAKKYFLRVIVW
NTSDVVLDETSITGENMSDVYVKGWMPGMEEDKQKTDVHYRSLDGEGNFNWRFVFGFEYL
PAEQLCLVSKKEHFWNLDKSEFRIPPKLIVQIWDNDKFSLDDYLGAIELDLHHLINPSKT
PEKCNLTMVPDGTTHPKSDQFKSLFDQKTVRGWWPCYMDKDGKRELGGKVELTLEIVNEK
EVDERPAGKGRDDPNMNPKLDPPKRPETSFFWFSSPCKTCKFIVWRKFKWMFIGLIVLVL
VLLFIGILLYSLPNYISMKIVKPFN
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgtggcagtggaatctgcggcgggtttgcccaagaagaaactgggcagtcca
gaccccatcgcatctgtcgtgtttaaagacgaaaagaagaaaaccaagtccattagcaat
gaactgaacccagtgtggaatgagacacttgagtttgatttaaaaggtgttcctcttgat
tcttcctcctacattgatgtgcttgtgaaagaccacgagactcttggcaaagacaagttg
attggatctgctaaagtctctttaaaagaccttgccagtagccaagttaaatctctccca
gtgaaaaacttggctctagtggatgaaaatggcaagggcataggagggaccatcagcatg
atgattggctatgagccgcctgccggtgctgtgacgaatccacaagatcaacaagatggc
agcatgggtggaaacacagctgggggtgaagagggtgactccactgattctggggcaccg
ggtgctgccacgtcccctggtgagcctggccagaaacttcggactaggacaaggaaacgt
cataatttggccaacaaacctcaggattttcagatacgtgtgcgggtgattgagggacgt
cagttgcctggaaataacatcaaacctgtggtcaaagtccatgtgtgtggagacacacac
agaactaggatcaggaaaggaaataacccatactttgatgagatattctttttcaatgtc
aacatgttgccctctgaactgtttgatgaggttgtaagcttccgggtgtataactcttct
tcttttagatcagactgtctcatgggtgaattcaagcttgatattggctacatctatgat
gaaccagctcactgtatcatgaagaaatgggttctcctgagtgacccagatgactcaagc
tcaggagccaagggttatatcaaagtcagcatgtttgtgttgggaacaggagatgagccg
ccggtggaaaggaaggaggaggacaatgataaagatgatgtggagagtaacttgctgctg
cccgctggcgtcgctctccgatgggttacacttaaactcaaagtgtttcgggctgaggac
gtcccccagatggatgactccatcacccagactttaaaagcagcatttgggggtgaagaa
aacaagaaaaatctagtggatccatttgttgaggcctgttttgctggcaaaaagctctgt
acacaaataattgagaagaatgcaaatccagagtggaaccagcagctcaatctgcaggtc
aagttcccatccatgtgtgaaagaatcaaactgactgtatttgactgggatcgcctctct
ggaaatgatgccataggcaccacgtatttggatctgtccaaaatagcatcctctggtggt
gaagttgaagaggattatccaggagatgaattttcagcaaaaaaaggagagactggggaa
tctgagatgggcttcctgcctacttttgggccttgctatatatgtctgtatggcagtcag
agagagttctcaggcttacctgacccatatgacgaccttaatttaggaaagggtgaaggg
gcggcttatcgagggagagttcttgttgaactctctactaaacttgatggaaagcctgac
aagtctgtggaagaaatatcaagcgacgatatcttggttgttcagaaataccagcgcaga
aggaagtattgtctgtgtgcagtgtttcacagtgcgaccatgattcaagaaccgggggag
cccattcagtttgaagttagcatcgggaactatggcaacaagatggaccaaacgtgcaaa
cctctggcttcgaccacacagtacagctgtgctgtttttgatggtaataattactactac
ctgccatggggcgacactaaacctgtgatttccatcacatccttttgggaggatatcagt
caccggttagactcactgaacatcattctgtatatatctaaccgtttgcaaacaaacctc
agtatgttgaagtctgcagtactgtccaaagctacagatgcaagactagtagaaatctgg
ctgaagctcatcaatcagttaatggaagatatcaccagtttaaaaattcctgacctggag
gggaagcccaatctcacagccctggatattcagataaagaagttgcgggacagtgctctg
gaaagcatcatggagggggccaaacacttgtttgaggaggccacagatgttactaagtgc
ttgagcatcattgaaacctggcttgacaaactcctgaaacttgctgaggagcctcagaac
agcatgcctgatgtgattatctggatgttgagaggagagaagagggtagcatacacccgc
atcccagcctatcaagtgctgcattcatcctactgtgagcaggcatgtggccagttctgc
gggaagaatcagactgtctttatgcagtatcccatggacgacaaaaaaggtttgaagatt
cccgtccagatacgtgtgaacatgtggcttgggctggcaacagaagaaaagaagttcaat
aattatgcagaggggattttcaatgtatttgcagaactgtatgaaaaccaggctcaagtt
ttgggaaaatggggcaccactggtctgcttaatcgcagcaagttctctgatgtcacaggc
aaagttaagctgaagcaggagtacttcatgccccctgttggctgggagtgggaaggcgat
tggcgtgttgaaccagagaaaactctgctgattgaggctgatgctggacacacagagttt
gtggatgaggtctatgagaatgagactcgattcccaggaggagaatggaagcttgctgcg
gagccttacactgatgtgaatggagaaaaagttcagagccctacagagattgaatgccca
cctggctggaagtgggaggataactggacttttgatggtaatcgggccgtcgatgagaaa
ggttgggaatatggtgtcaccattccacctgatgataagcccaaatcttgggtggcagct
gagaagatgtaccatgttcatcgtcgcagaagaatgatccgccctcgcaaaaggattcct
ggtgtcaaaacagccactgataagaaggatgcaggagatgcagaaggatgggaatactcc
tctctcattggctggaagttccacaggcagcagcgatcctctgacacgttccgccgacgg
cgctggagaaggaagatggcaccctctggtcgagttggagcctctgccatttttaaactg
gagggggctctgggcgtcgacatggaatctaaagttgaagaaaaaggcaccaaagcagaa
gcttcagttcagcagtttggtgcaaacaggccaactgtatcatgcacatttgatggaccc
aatgcgtaccacttgagagtttatgtttaccaagccagaaacctttttgctctggacaaa
gacagcttctcagatccatacgtccatgtgtcgttcttgcataacagccaaacaacagag
acaatccgaagcaccttgaacccgacatgggatcagactcttatatttaaaaatgtggaa
atctatggtgatccccagtctctcgcccagaatcctcccagagtggtaatggaaatcttt
gacaacgatcaagtgggtaaagatgaaatgcttggcagaagtacatgtgtacctttggtg
aagttgacttcaggtgaagatggatcacctaaactcctctgggagcctgtaatgtacaaa
aatgctcctgctggggaggttctagtggctgcagagctcattttaaagaccaagggaaat
gacactgagcttccccttgctcctgctaaacgaggagagaagctctatatggttcctcag
ggggtacgaccggtggtgcagctcactgccatagaggttctagcatggggattacgtaac
atgaagacatatcagctggctccagttacttcacccagtctggtggtggagtgcggagga
gagagtgttcagacagctgtcatcaagaacataaagaagtgccctaatttccaaggaaat
gtcctctttttcaaagtgcttctacccaaagaagagatatatgctccccctatagtgctg
aaagtcatcgatcacagaccctttggaaggaagcccgtggtgggtcagtgcacgataagt
tccctggaagagtttcgatgtgacccttatgtcacagtagctgatgtcgccttgtcttca
aaaatgtctttgatggcagctggtccaagagacctccatgtaaacattgatgacgacaga
cagcatcttctagaagctcagtacatgtatggcatctcagctgctgttgacaaaatgggc
actgctagtcaacttcaacgtgagaaggagaaagagactgttgattggtggagtaagttt
tatgcttctgttggacagagtgagaaatgccgcccataccttgacaaaggttatgacaca
ttacaagtttatgactgtgagcttgaaagtgtaaatgaattcatgggtcttaccgatttc
tgcaaaacattcaaattgcaacgtgggaaaaaggaatgtgacgatgatgatgatcccgct
gtagttggagaattcaagggctcctttaaggtctacccattgccagatgatccaggggtg
gctcctccgccacgtcagttcagagagctgcccgacagcgtctctcaggagtgtgtggtc
aggatctacgtggttcaagccatcgacctgcaacccaaagacaacaatggcaaatgtgac
ccatacatcaaaatctctttggggaaaaagtctattgaggacagagacaactatgtgccg
tattcactcaacccagtgtttggcagaatgtttgaaatgacatgcttcctcccacaagac
aaagacctgaaaattgcagtatatgactttgatttgctcacccgtgatgagaaagttggg
gagacggtgattgacttggaaaaccgtttcctttctcacttcggttcctactgtggttta
ccccagacatactgcgtttctggattaaaccagtggcgcgatcagctcaaaccatctcag
attcttgaacatcatgcccgtttgaaaggattgagtcgacccaggagtgaagacaatgga
aacactttatcctttggtggccgattgtattccctctctgactttgaagcgaacaagaaa
attcacgaacacctgggtccgccaagtgaacggctcgctctgcacgtcctcagaactcaa
ggccttgttccggagcatgttgaaaccagaactctcttaagtagcttccaaccgactctc
ccgcagggaaaactccagatgtgggtagacattttccccaaaagccttgggcctcctgga
cctccttttgacatatctcctcgcaaagcaaaaaaatactttctgcgagtcatcgtttgg
aacacgtctgacgtagttttggatgaaaccagcattactggtgaaaatatgagtgacgtc
tatgtaaagggttggatgccaggtatggaagaagataagcaaaaaacagatgtccattat
cgttctttggatggcgaaggaaatttcaactggagatttgtctttggatttgaatacctg
cctgcggagcagctttgtcttgtatctaaaaaggaacatttctggaacctcgacaaatca
gagtttagaatcccacccaagctgattgttcaaatatgggataatgacaaattctcactg
gatgattacttaggtgcgattgaacttgatctgcaccacctcatcaacccttccaaaaca
cccgagaaatgtaaccttaccatggtgccggatggaactacgcatccaaaatcagaccag
ttcaagtctctttttgaccagaagacagttagaggatggtggccatgttacatggataaa
gatgggaagagggagcttggtggaaaggtagagttgactttggagattgtgaatgagaag
gaagtggatgagagacctgctggaaaaggcagagatgatcccaatatgaatccgaaactg
gatcctcctaagcgacccgaaacctcgttcttttggttctcaagtccgtgcaagacgtgc
aagttcatagtgtggcgaaagtttaagtggatgttcatcggcctgattgtgctggtctta
gtgctattattcattgggatcttgttgtattcattaccaaactacatctccatgaaaatc
gtcaaacccttcaattga
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integrated database retrieval system
