Pimephales promelas (fathead minnow): 120463989
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Entry
120463989 CDS
T08155
Symbol
jag1b
Name
(RefSeq) protein jagged-1b
KO
K06052
jagged-1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04330
Notch signaling pathway
pprm04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120463989 (jag1b)
04371 Apelin signaling pathway
120463989 (jag1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pprm04090
]
120463989 (jag1b)
CD molecules [BR:
pprm04090
]
Proteins
120463989 (jag1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_2
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
EGF_3
Motif
Other DBs
NCBI-GeneID:
120463989
NCBI-ProteinID:
XP_039509205
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MIVRRSSVFSAFYLHAFLLCLPTKVSDASGHFELEIVSMQNANGELQNGSCCGGARNPSD
RKCTRDECDTYFKVCLKEYQSRVSAAGTCSFGTGSTPVLGGNKFSTKGTRSEKSRIVLPF
SFAWPRSYTLIVEALDFNNDTASESGKLIEKAYHSGMINPNREWQRLTHNGPVAQFDYQI
RVTCDEHYYGFGCNKFCRPRDEFFGHYTCDQNGNKTCLEGWTGPDCNTAICRQGCSTEHG
SCKQPGGCKCLYGWQGPYCDKCIPHPGCVHGTCVEPWQCLCDTNWGGQLCDKDLNYCGTH
QPCLNGGTCSNTGPDKYQCSCEDGYSGVNCERAEHACLSNPCGNGGTCKETSQGYECVCA
VGWSGPSCEINVDDCTPNPCKHGGTCQDLVNGFKCTCPLHWTGKMCLIDANECEDKPCVN
AKSCHNLIGGYFCECLPGWTGQNCDINIIDCKGQCLNGGTCKDLVNGYRCLCPPGFSGEH
CEKDVDECASSPCLNGGRCQDEVNGFQCLCPAGFSGQLCQLDIDYCQPNPCQNGAQCFNL
ASDYFCKCPDDYEGKNCSHLKDHCRTTSCQVIDSCTVAVASNSTPDGVRYISSNVCGPHG
RCRSQAGGQFTCECQEGFRGTYCHENINDCESNPCRNGGTCIDKVNVYQCICADGWEGVH
CEINIDDCSLNPCLNKGACQDLVNDFYCECRNGWKGKTCHSRDSQCDEATCNNGGTCHDE
GDIFKCRCPPGWDGATCNIANNSSCLPNPCENGGTCVVNGDSFNCVCKEGWEGSTCTENT
NDCNPHPCYNTGTCVDGENWYRCECAPGFAGPDCRININECQSSPCAFGSTCIDEINGYR
CVCPPGRTGPECQEVIGRPCIANGQVTADGAKWEENCNLCQCQNGRIHCTMMWCGPKSCR
AGKTRGECPAGQSCVPIKEELCFVKPCSSLGECWPPAPSPPSKCHASFSYQDDSCANITF
TFNKENMPQGLSVEHVCNELRHWYLLKNLTAEYAVSITCEPSSTASNEIHVSISTEEARL
DRSPIKDITVQIIDLVSKQNGNSTIIRAITGVRVHQTQSPKPDYLVPLLSSIFIVLWILA
LASAFMWCIHRRRKQNAHGNTTTSATEDNTTNNVREQLNQIKNPIEKHAAHGVAIKDYEG
KNSIIAKIRTHNSEVEEEEMDKHLQKARFTKQPAYTLVEREERTPNKNPNWTNKQDNRDL
ETAQSLNRMEYIV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgcgacggagttcagtattttctgctttttaccttcatgcctttttgttatgc
ttgccgacgaaggtgtctgacgcatcggggcactttgagctggaaatcgtatcgatgcag
aacgcgaacggcgagctgcagaacggctcgtgctgtggcggcgcgaggaacccgtcggat
cgcaaatgcacgcgggacgaatgtgatacatattttaaagtttgtctgaaggaatatcaa
tcgcgagtttccgcggccgggacttgcagtttcggaactggatctacgcccgttctcggt
gggaataaattttcgaccaagggaacgaggagtgaaaagtcaaggattgttttacccttc
agttttgcgtggccgaggtcctacacgttgatagtggaggccttggacttcaataacgac
accgccagtgaaagtggaaagctgatcgagaaagcgtaccactctggcatgatcaaccca
aatcgagaatggcaaaggctaacccataacggccccgtcgcccagtttgactaccagatc
cgggtaacctgcgacgaacactactatggctttggatgcaacaagttctgccggccacgg
gacgagttttttggacattacacctgtgaccagaatggcaacaagacctgcctggaaggc
tggacaggccctgactgcaatacagctatctgcagacaaggttgcagcaccgaacacgga
tcctgtaagcaaccaggtggctgcaagtgtctgtatggctggcagggtccgtactgtgat
aagtgcatccctcacccgggctgtgtacatgggacctgcgttgaaccatggcagtgcctc
tgtgacactaactggggtggacaactctgtgacaaagatctaaactactgtggaacgcac
cagccatgtctgaacggaggaacgtgcagcaatacagggcctgacaagtaccagtgctct
tgtgaagacggctactctggggtcaactgtgaacgagctgaacacgcttgtctgtccaac
ccatgtgggaatggagggacatgcaaggaaaccagtcagggttacgagtgtgtctgtgca
gtcggctggagcggcccatcgtgcgaaatcaatgtggacgactgtacgcctaacccatgc
aaacatggaggtacctgtcaggatttggtcaatggctttaaatgtacctgccctcttcac
tggaccggcaaaatgtgtctgattgatgccaatgaatgtgaggacaagccatgtgtgaat
gccaagtcatgccacaatctgattggtggatatttctgcgaatgtctccctggctggacg
ggacagaattgtgacataaacataattgactgcaagggtcagtgtctgaatggaggaact
tgcaaggatttggtgaacggttaccgctgtctttgccctcctggcttctcaggtgaacac
tgtgagaaggacgtggatgagtgcgctagcagtccctgtctgaacggtggacggtgtcag
gatgaagtcaatggatttcagtgcctgtgtcctgccggcttctcgggccagctgtgtcag
ctggatatcgattactgccagcccaacccatgccagaacggggcgcagtgtttcaacctg
gcctcggactacttctgcaaatgccccgatgactacgagggtaaaaactgctctcacctg
aaggaccattgtcgaaccacatcatgccaagtgattgacagctgcactgttgccgtggca
tccaacagtacgccggacggggtgcgatacatctcctccaacgtctgtgggcctcacggg
cgctgcagaagccaggccgggggccagtttacgtgcgagtgtcaggagggtttcagaggc
acctactgtcatgaaaatataaacgactgtgaaagtaacccttgtcgcaacggcgggact
tgcatcgataaggtgaacgtttatcagtgcatttgtgctgacggttgggaaggagttcac
tgcgaaatcaacattgatgactgcagcttgaacccctgcctgaacaagggagcatgtcaa
gacctggtgaacgatttctactgcgaatgtagaaatggctggaagggaaaaacctgccac
tcccgtgatagccaatgtgacgaagccacatgcaacaatggaggtacatgccatgatgaa
ggggacatcttcaaatgcaggtgcccacctggctgggatggtgccacatgtaacattgcc
aacaacagcagctgtctgcccaacccatgtgagaacggaggcacctgtgtggtcaacggc
gactccttcaactgcgtctgcaaggaaggctgggaaggatccacctgcaccgagaatacc
aacgactgcaacccacacccatgctacaacaccgggacgtgtgtggacggtgaaaactgg
taccgttgcgagtgtgctccgggtttcgccgggccagactgtcgcataaatataaatgag
tgtcagtcttctccttgtgcatttggctctacctgcattgatgaaatcaatggttaccgc
tgtgtttgcccacctggaagaacaggaccagagtgtcaagaagtcattgggagaccctgt
attgctaatggtcaagtaactgctgatggcgccaaatgggaggaaaactgcaacctttgc
caatgtcaaaatggaaggattcattgcaccatgatgtggtgtgggccaaagtcatgtcgg
gcaggaaagaccagaggtgagtgtcctgctggtcaatcatgtgttcccatcaaggaagag
ctctgcttcgtcaaaccctgctctagtctgggagagtgctggccccctgcgccctctcca
ccctccaaatgccacgccagcttctcttaccaagacgacagctgtgccaacatcacgttc
acctttaacaaggagaacatgcctcaaggcttgagtgtggaacatgtatgtaatgagctg
aggcactggtacctgctgaagaacctcacggcagagtatgctgtgtccatcacctgtgag
ccatcttctacagctagcaacgagattcacgttagcatctccaccgaagaggccaggttg
gacaggagtcctattaaagacattacggttcaaatcattgacttggtgagcaagcaaaat
gggaacagcaccatcatcagagccatcactggtgtacgggttcaccagacacaaagcccc
aaacctgactacctggttccgctgctcagctccatcttcatcgtgctctggatccttgcc
ttggcctcggccttcatgtggtgcattcaccgtcgacggaaacagaacgcccacggcaac
acaactacctcagcaaccgaggacaataccaccaataatgtgcgcgagcagctcaaccaa
atcaaaaaccccatcgagaaacatgcggcccacggcgtggccataaaagactacgagggg
aagaactccatcattgccaaaattaggacgcataactctgaggtggaggaagaggagatg
gacaaacacctgcagaaagcgcgcttcactaagcagccggcctacacgctggtggagagg
gaggagcgcacgcccaacaaaaacccaaattggactaacaaacaggacaacagagacttg
gagacggcacaaagcttaaacaggatggagtatatcgtatag
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