Pimephales promelas (fathead minnow): 120463996
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Entry
120463996 CDS
T08155
Symbol
loxhd1b
Name
(RefSeq) lipoxygenase homology domain-containing protein 1 isoform X1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120463996 (loxhd1b)
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120463996 (loxhd1b)
Cilium and associated proteins [BR:
pprm03037
]
Other cilia and associated proteins
Stereociliary proteins
120463996 (loxhd1b)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Other domain-containing proteins
Others
120463996 (loxhd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLAT
ATS3
DUF7755
Motif
Other DBs
NCBI-GeneID:
120463996
NCBI-ProteinID:
XP_039509217
LinkDB
All DBs
Position
Unknown
AA seq
2394 aa
AA seq
DB search
MPSKEKKTRQAQETEEEGENDDGEEKKSKSRRKGKISDPDCATKKKQKHAEDTVSDASEV
RKSQRGPKKKKKKKKSSKSKDEEVKSSSEEDEDQHESRNKHKNLPDVVQVTEVGRNSRKD
KNPVMGSKDKKSKDEGGKKKKKKEETDPEEEEEDDDDSQKKKKKKKKSKKGSGESDDEGK
KGKGKKKKSKNVDYVEIYENELRNYESEKVENYEDEYHKKKVYEVVTITGDVNGAGTDAN
VFVTLFGEYGITPKLHLASNTEKRNRTAFEKNKTDVFRIKTHNVGPLKKIRIEHDNTGLN
ASWYLDRVVVTDMNRPHLRFYFACNNWLSRAEGDGLFVRDLLGSPDPMDMPKYNKYVVSV
FTSDVKGSGTDADVFLNIFGENGDTGERRLDNDKNNFERGTEDKFTIEAPNLGRVRKITI
GHNNKGSSAGWFVEKVIVDDLGNKAMYEFPINRWFAIDEDDGKIQRDVLVGGSQPTGIVY
NVQVVTGKIRGAGTNSKIHMVMHGSKGLKNSGKVFLEGGTFERGLTDIFNVEIAALLSPL
SRVTIGHDNGGVSAGWYCEKVVVFCPFTGIEQTFPCSKWLDENESDGLIERELYEMVSLR
QKRQKKHPWSLWIWTSDLPGAGTDASILLQIYGEKGKSDEMKLDNKTDNFEQGQLDKFMI
ELPDLGKLTKLRIWHEKRNPFAGWHLSRISIMKTLTKETYKFPCERWLDTNEDDNEVVRE
LPATAELIPEPLPVIKYRVTVCTGNVSGGGTDAHVFLCLIGDLGDTGERTLINCKNNVNK
FEKGNADEFIIEAVSIGQVRRVRIGHDGRGGGCGWFLDKVLIREEGQAESQAVEFPCNRW
LDRGEDDGQIVRELVPFADGQRLYNVSYHIAVKTGNVSGGSSDSKVFVKLYGEKGDTSRM
MLVVSDNNLRNYFETGRVDVFTVDTADVGQISRLLIGHTNEGMRAGWFLDSVQIMVPNHG
NHYMFPSHRWLCRDEADGKTEVEIYPSEILDLEQLINYEVTVVTGDVFAAGTNANVSIQI
YGEQGKTEVLSLGSRSNNFERGTTEIFKIEAKDVGKIFKIRVSHDDSGIGSGWFLDRVEV
KSLIMAMVPKEKKEDKKKKKKKKKEEEEEEEEEEMREVVLTHRFPCDRWLAAGEEDGETV
VELLPEENEELEENTYEVSVFTGNMMGSGSDANVFINIYGENGDTGERRLRKSNHLNKFE
RGQEDVFSITAVDLGTLKKLRIRHDNSHQSAWYLDRVEIVDTKDDTTYYFPCNRWLAVDE
DDGQIARELVPVDEAFMRKDEDEEESGATLGLEQKAMSTTYTLRIKTGEKKHAGTDANVF
AILYGENDDTGIINLKASKSHKNKFEKGMIDEFTVEAVDLGELQKLRIGHDEAGGSAGWF
LDWVEINAPSQGQRLRFPCGRWLDRGEDDGAIVRDLYPAELQTELYTPFVPYEITTFTSD
VFAAGTDANVFIVLYGQKGLATQQKYLCVNKRERRLAFERSAEDMFIVELEDIGDIIEKI
RIGHDNRGTNPGWHLDRVEIRRLLRKGKGSETTIFPCERWLARSEDDGETVRELVPSDII
TEKLLRDGTLKHSEIEVEDALETHTYTVTVRTGDMYGAGTDANVFLTVYGDLGDTGERKL
RKSESSSNKFERGAVDKFSIEAVDLGLVFKIRIRHDDTGAGADWYLDQVEVVDTDTDEVY
MFLCERWLSRKKEDKRIERTFFIKDYEGERNPQNVKKSMPNSKAGLDGNMNKKKKKKKAV
IMEEGPMIPYHFTVSTGADRDASTSSRVYVIILGPGDLETERIWLDLPDGKKCFASGGME
NFMSYGLDVGEIKRVELGHNGATPESCWLVDELSVAVPTKGIQYNFVCKCWLAKDRGDGL
TARVFNILDATTISIIRKVVYEVTVVTGDTQNAGTDTNIFITVSGANGSTEEMLLMKNED
RFERGQEDTFNLEIDDIAPLKKLRVRIDGTGSRPDWFLDKMIMRNLTTEEVYVFTYEEWL
SKTKGPKRTKVCELPAVVDDEEMVEKTTYIIQVKTSDLTAAGTDANVFLIVFGENGDTGT
LALKESSNRNKFERKQVDVFRFPDVLSLGELSKVRVWHDNEGLAPGWHLEFIDVKDELLD
ETFRFPCDRWLARSEDDGQIMRELACANNDILDLSEKTKYEIEITTAGSDDAETKENVWI
VLEGKKCRSKEFMMENSKKKKFLRGATDSFEFSSKNVGEIVGICLGHLTKEKKVKNECFW
HVQQVLITEKELGNKFYFTCDARIPLSAKRDEFMTFECSKTVESFASKVRSLVPVKYEII
VITGDVKEAATDANVSITLYGVNGDSGKRALRQKFRNLFERGRTDRFLLEMLDLGELLRV
RVEHDDSSTSPGWFLECVEVTNTANWVTTIFPCAKWLDRNKADGQTQRVLYPKY
NT seq
7185 nt
NT seq
+upstream
nt +downstream
nt
atgccctccaaggagaaaaaaacacgacaggcacaggaaaccgaagaagaaggggagaac
gatgacggagaggagaagaaatcaaagtcgagaaggaaaggtaagatcagcgatccagat
tgtgccactaagaagaaacagaaacacgctgaggacacggtcagcgatgcatccgaggtg
aggaagagccagagagggccgaagaagaagaagaagaagaagaaaagctctaaatcaaag
gatgaggaggtgaagagcagcagtgaggaagatgaagatcaacacgagtcgaggaacaaa
cacaagaaccttccggatgtcgttcaagtgaccgaggtcgggagaaacagcagaaaggac
aagaatcctgtcatgggatccaaagacaagaagtccaaagacgagggggggaagaagaag
aagaagaaagaagaaacggaccccgaagaggaggaggaagacgacgacgactcccagaag
aagaagaagaagaagaagaagagcaagaaaggatccggtgagagtgacgatgagggaaag
aagggaaagggcaagaagaagaaatccaaaaacgttgattatgtcgagatctacgagaac
gaactgaggaactacgagtccgagaaagtggagaactatgaggacgagtaccacaagaaa
aaagtgtatgaggtggtgaccatcactggagacgttaatggcgcaggtacagacgccaat
gtgtttgtcacgctgttcggggaatatggcatcactcccaaactgcacctggccagcaac
acagagaagaggaatcgaactgcttttgaaaaaaacaaaactgacgtcttccggataaaa
acacacaatgtcggccctttgaagaaaattaggattgaacatgataacacgggcctgaac
gccagctggtatctggaccgtgtcgtggtcacagacatgaaccggccacatctacgcttc
tacttcgcctgtaacaactggctgagccgagccgagggcgacgggctgttcgtgcgggac
cttctgggcagccccgaccccatggacatgcccaaatataataaatatgttgtgagtgtg
ttcacgtctgatgtgaaaggcagcgggacggatgctgatgttttcctcaatatttttggt
gaaaatggagatacaggtgagagaagactcgacaacgataaaaacaactttgagagagga
acagaagacaagtttaccatcgaggctccgaacctgggccgagtgaggaagatcaccatc
ggacacaacaacaagggctcctcggcgggatggttcgtggagaaggtcatagtggatgat
ttgggaaacaaagccatgtacgagtttcccatcaaccgctggtttgccatcgatgaagat
gatggaaagatacagagagatgttctggttggagggagtcaacccaccggaatcgtgtac
aacgttcaggtggtgacggggaaaatccgaggtgcgggaaccaactctaaaatccacatg
gtcatgcacggctccaaaggcctgaagaacagcgggaaggttttcctggagggaggaacg
tttgagcgcgggctcaccgacatctttaacgtggagatcgcagcgctgctcagtcctctc
agtcgggtcaccatcggtcacgataacggaggggtcagtgccggctggtactgcgaaaag
gtggtcgtgttctgtccgttcacgggcatcgagcagacgttcccctgctctaaatggctg
gatgagaacgagagcgatggactcatcgagagagaactctatgaaatggtctcgctcagg
cagaagaggcagaaaaaacatccctggtccctgtggatttggacgtcagatcttccaggc
gcaggaacggacgcctccatcttactccagatatacggggagaagggcaagtccgatgag
atgaaactcgacaacaaaactgataactttgagcagggccagctggacaagttcatgatc
gagctgccggatcttgggaagttgacgaaactgaggatctggcatgagaagaggaatccc
ttcgccggctggcacctgagtcggatatccataatgaaaactttgacgaaggaaacgtat
aagttcccatgcgagcgctggctggacactaacgaggacgataacgaggttgtgcgagag
cttccggccacagcagagctgatcccagagccgctgccagtcatcaagtatcgcgtcacc
gtctgcacggggaacgtgagcggcggaggaacggacgcccatgtgttcctgtgtctgatc
ggagatctgggagacacgggcgaacgcacgttaatcaactgcaagaacaacgtcaacaag
tttgagaagggcaacgctgacgagttcatcatcgaggcggtgtcgatcgggcaagtgcgc
cgggttcggatcggtcacgacgggcgaggcggaggctgcggatggttcctggataaagtg
ctgatccgagaggaaggccaggccgaatcccaggccgtcgaattcccgtgcaacagatgg
ttggaccgcggggaagacgacgggcagatcgttcgggaactcgtgccgttcgcagacgga
caaagactttacaacgtcagttaccacatcgcggtgaagacgggaaacgtcagcggagga
agctccgactcgaaagtgttcgtgaagctttacggcgagaagggagacaccagcaggatg
atgctcgtggtgtccgacaacaacctgcgcaactacttcgagacgggacgggtggatgtg
ttcaccgtcgacaccgcggacgtcgggcagatcagccggctcctgattggtcacactaac
gaagggatgcgcgccggctggtttctggacagcgttcagatcatggttcccaatcacggg
aatcactacatgttcccgagtcaccgctggctgtgccgagacgaggctgatgggaagacg
gaggtggagatttaccccagtgaaatactggacctcgaacaactgatcaactatgaggtc
acggtggtgacgggcgacgtcttcgccgccggcacgaacgccaatgtctccatccagatc
tacggagagcaggggaagacggaggtgctgagtctcggcagcaggtcaaacaactttgaa
agaggaacaacagagatattcaagattgaagctaaagacgtggggaagatcttcaagatc
cgcgttagccacgatgactctggcatcggatccggatggttcctggaccgggtggaggtc
aagagtctgatcatggccatggtgcccaaagagaagaaggaagacaagaagaagaagaag
aagaagaagaaagaggaggaggaagaggaggaggaggaagagatgcgagaggtggttctc
acacacagattcccctgcgatcgatggctggcggcgggtgaggaggacggagagactgtg
gtggagcttctgcccgaggagaacgaggagctggaggagaacacgtatgaggtgagtgtg
ttcacggggaacatgatggggtccggatctgatgccaatgttttcatcaacatctacgga
gagaacggagacacgggcgagcgacgcctgaggaagtccaaccacctcaacaagttcgag
cgcggacaggaggacgtgttctccatcacggccgtggatctggggacgctgaagaaactg
aggatccggcacgacaacagccaccagtcagcctggtacctggaccgggtggagatcgtg
gacacgaaagacgacaccacgtattacttcccctgtaatcgctggttagcggttgatgaa
gacgatggtcaaattgcccgggagctcgtccctgtggatgaggccttcatgaggaaggac
gaggatgaggaggagtccggcgccacgctgggattggagcagaaagcgatgtcgacaaca
tacacgctgaggatcaagacaggagagaagaaacacgcaggaacggacgccaatgtcttc
gccatcctgtatggagagaatgacgacacaggaatcatcaacctgaaagcctctaaatca
cacaaaaacaagtttgagaagggaatgatcgacgagttcaccgtggaggccgttgatctc
ggagaactccagaaactgaggatcggccatgatgaagcaggaggctcggcgggctggttc
ctggactgggtggagatcaacgctccttctcaaggacagagactccggttcccatgcgga
cgctggctggaccgaggagaagacgatggagccatcgtccgagacctgtatcccgccgag
ctgcagaccgagctgtacacgccgttcgttccctacgagataaccaccttcacgagcgac
gtcttcgccgcggggacggacgccaacgtcttcatagtcctgtacggtcagaagggcctg
gcaacgcagcagaagtacctgtgcgtcaacaagagagagagacgcctggcgttcgagagg
tcagcagaagatatgttcatagtggagctggaagacattggagacatcatcgagaagatc
cgcatcggacacgataacagagggacgaaccccggctggcatctggacagagtggaaatc
agaagacttttaagaaaaggaaagggttcggagaccaccatcttcccctgcgagcgctgg
ctggcccggtccgaggacgatggggagacggtgagagagctggtgccgtcggacatcatc
acggagaagctcctgagagacggcacgctcaaacacagcgagatcgaggtggaggacgct
ctcgagactcacacgtacaccgtaacggtgaggacgggcgacatgtacggcgccggaacc
gatgctaacgtcttcctgacggtctacggggatctgggagacacgggagagcgaaagctt
aggaagtctgagagcagcagtaacaagtttgagagaggagccgtggataagttcagcatt
gaagcggtggatctgggtctggtgttcaagatccggatccggcacgacgacaccggggcc
ggggccgactggtacctggatcaggtggaggtggtggacacggacacggacgaggtgtac
atgttcctgtgcgaacgctggctctccaggaagaaggaggacaagcgcatcgagaggacc
ttcttcatcaaggactacgagggcgagaggaacccgcagaacgtgaagaagagcatgccg
aactccaaagctggactggacggcaacatgaacaagaagaagaagaagaagaaggctgtg
atcatggaggagggtccgatgatcccgtaccacttcacggtgtcgacgggagcggatcgc
gacgccagcaccagcagtcgggtctacgtgatcatcctgggacccggcgatctggagacg
gagcggatctggctcgatttgcccgacgggaagaagtgcttcgccagcggaggaatggag
aatttcatgagctacggactcgacgtgggcgagatcaagagagtcgagctgggccacaac
ggagcgactccggaaagctgctggctggtggatgagctctcggtggccgttcccacgaaa
gggattcagtacaactttgtgtgcaagtgctggctggccaaagacagaggagacggtctg
acggccagagtcttcaacatactggacgccacaaccatcagcatcatccgaaaggtggtt
tatgaagtgactgtcgtcacgggtgacactcaaaacgcaggaacagacaccaacattttc
ataactgtgtccggggccaatgggagtacggaggagatgctccttatgaaaaatgaggac
aggtttgaaagaggacaggaggacacatttaacttggagatcgatgacatcgcgcccctg
aagaagcttcgagtccgcatcgacgggacagggagtcgtcctgattggttccttgacaag
atgatcatgagaaacctgaccacggaggaggtgtacgtcttcacgtacgaggaatggctc
tccaagaccaaaggacccaagaggacgaaggtgtgtgaacttcctgccgtggtggacgac
gaggagatggtggagaaaaccacgtacatcattcaggtcaaaaccagtgaccttactgcc
gctggtaccgatgccaacgtgtttctgatcgtgttcggggaaaacggagacacgggaaca
ctagcactgaaggagagcagcaacaggaacaagttcgagcgcaaacaagtggacgttttc
cgattcccggatgtcctgagtctgggcgagctgtcgaaggtccgggtctggcacgataac
gagggcctggcgcccgggtggcacctggagttcatcgacgtgaaggacgagctcctcgac
gagaccttccgcttcccctgcgaccgatggctggcccgaagcgaagacgacggtcagatc
atgagggaactggcgtgtgccaataatgatattctggatctcagtgaaaagaccaaatac
gagatcgagatcaccacagccggttctgacgacgccgagacgaaggagaacgtgtggatc
gttctggagggcaagaaatgtcgatctaaagagttcatgatggagaactcgaagaagaag
aagtttttgcgtggtgccacggattcattcgagttttcctctaagaatgtgggcgagatc
gttggcatttgcttgggtcatttaacgaaggagaagaaggtgaagaacgagtgtttctgg
cacgtgcagcaggtgctgatcacagagaaagagctgggcaacaagttctacttcacgtgt
gacgcacggatccccctgtcggccaagagagacgagttcatgacgttcgagtgcagcaaa
accgtggagagtttcgccagcaaagtccgcagtctggttcccgttaaatacgagatcatc
gtgatcacgggagacgtgaaggaagccgccaccgacgccaacgtctccatcacgctctac
ggcgtcaacggggactcagggaagcgcgcgctccggcagaagttcaggaacctgttcgag
cggggccggacggaccgcttcctgctggagatgctggatctgggggaactcctgcgggtc
cgggtggagcacgacgactccagcacgtcgcccggctggttcctggagtgtgtggaggtc
accaacaccgccaactgggtgaccaccatcttcccctgcgccaagtggctcgaccggaac
aaagccgacgggcagacgcaaagggttctgtatcccaaatactga
DBGET
integrated database retrieval system
