Pimephales promelas (fathead minnow): 120464058
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Entry
120464058 CDS
T08155
Name
(RefSeq) bile acid receptor-like
KO
K08538
farnesoid X receptor beta
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120464058
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120464058
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120464058
Nuclear receptors [BR:
pprm03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
120464058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120464058
NCBI-ProteinID:
XP_039509307
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
QYYDVLVDPLSCSYQEPDLQSPLYGQQPFSPVNMQFSMYGAPNVQACNPPYPYSHQCSEY
ICEPEIEVQSPTRGSIIGFPVLKRPRMGHGARVKGQDELCVVCGDKASGYHYNALTCEGC
KGFFRRSVTKKAIYRCKSGGSCEMDMYMRRKCQDCRLRKCRAVGMLAECLLTEVQCQSKR
LRKGYKNRGRNGSTGRAEDDYSENRSVSSTSRFTTRQVSSSFSREQRCILNRIVEAYRRY
IIQDNTHCPVPLWSSLTNTDMIPPQMEKLLQFLRSVPGFELLDSSDQNTLLSSSSVEVMF
LLLAQQFSENPSSVSTALYPANSNNSNPDWAKTLESKIGNSHRILTHSGLNDELLRSVVN
FLHSMVTIAVTETEYALLTATAVLCSDRPSLRAVGCVENLQEFVLELLSRACCCYSQGTA
QDPRRFARLLGRLTELRTLRHNHLTLLPQQPWDSQNLSEREIYDI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
cagtactatgatgttcttgtggatccactgagctgctcttatcaagaaccggatctacaa
agtcctctctatggacagcagccgttcagccctgttaatatgcagttctccatgtacgga
gcgccaaacgttcaagcatgcaacccgccgtacccctacagccatcagtgctctgagtac
atctgtgagcccgagatagaggtccaaagcccaacaagaggcagcattattggttttcca
gtgctgaaaaggcccaggatgggacatggagctcgggtaaaaggccaggatgagctgtgt
gtcgtgtgtggagataaagcctcgggatatcactacaatgccctcacctgtgagggatgc
aaaggtttcttcagacgcagcgtgactaaaaaagccatataccgctgcaaaagtggtgga
agctgcgagatggacatgtacatgcggagaaagtgtcaggactgcaggctacgcaaatgc
agagccgtcgggatgctggcagagtgtctgcttacagaagtgcaatgccagtcgaagaga
ctgaggaagggctacaagaacagaggacgcaacgggtcaacaggaagagctgaagatgac
tactctgaaaacaggagcgtctcgtccaccagcagattcaccacacggcaggtttcatcg
agtttctccagagagcagagatgcattctcaatagaattgttgaggcttatcgtaggtac
ataattcaagacaacacacactgcccggtgcctttgtggtcaagtttaacaaatacagat
atgattcctcctcagatggagaagcttttgcaatttttgaggagtgtacctgggtttgag
cttttggatagttctgaccagaacacacttctgtccagctcttcagttgaagtcatgttc
ctactcttagcacagcagttctcagagaacccctctagtgttagcactgctttataccca
gcaaattcaaataactcaaatccagattgggcaaaaactttagagtccaagattgggaac
agccacaggattctgacacactcagggttgaatgatgagctcttgagatctgtggtaaat
ttcctccacagtatggtgactattgcggtaaccgagactgaatatgcacttctaacggcg
acggcagtgttgtgctcagacaggccatctcttcgtgcggtgggctgtgttgagaactta
caggagtttgttttggagctcctgtcccgggcttgctgctgctatagtcaggggacagca
caggacccgcgacgcttcgccaggctcctgggacgactgacggagctgagaacactacga
cacaaccacctcacccttctcccacagcaaccctgggactctcagaatctctcagaaaga
gagatttatgacatctga
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