Pimephales promelas (fathead minnow): 120464073
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Entry
120464073 CDS
T08155
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120464073 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120464073 (capn3a)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
120464073 (capn3a)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C2: calpain family
120464073 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
120464073
NCBI-ProteinID:
XP_039509325
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFSGQDYNLLKQEYLQKKTLFEDETFPATV
DSLGYKELGHKSNKVKNIVWKRPKEICENPQFIVGDANRTDICQGDLGDCWLLAAIACLT
LNDKLLYRVIPQEQSFSEGYAGIFHFQFWRYGDWVDVVVDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTAEGMEDFTGGVTEFYEMKEAPKELYKIMKKALARG
SLMGCSIDSLVPARFETRTTTGLVKGHAYSVTAVEECKQSLQKESKIRLVRLRNPWGQVE
WNGPWSDNSKEWETISKAEKEKLQHQNAEDGEFWMSFEDFKKNFTKIEICNLTPDALEDD
KLHKWTVSVNEGRWIRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDDEVACTFVVAL
MQKNRRRERKLGANLFTIGFSIYEVPKEMHGNKQHMQKEFFTSNSSKARSRAYINLREVT
QRFRLSPGEYVIVPSTYEPHLEGDFILRVFSERRNTSEEIENRIEADHPVPAPASTGEES
EEDQQFLSIFQQIAGDVSTGEPLSEGGSQMEISANELKNVLNKVVSKYKDINTEGFSREN
CRSMIALMDMDGTGRLNLQEFRHLWNKIKQWQGIFKRYDFDHIGTISSYEMRNAINDAGF
RLNNQLYDIVTMRYANDNMNVDFDSFVSCLVRLEGMFRAFQAFDRGGDGTIRLNVLEWLQ
LTMYA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccttatacgccgtctgggttcttttgcgaccggttaatccgggagagagagagaagg
gatggcgaaggctccctgagcaaacctctccgttttagcggacaggactacaaccttctc
aagcaggagtacctccagaagaagaccctttttgaggatgaaacctttcctgccactgtg
gactcccttggctataaagagctgggccacaagtcgaacaaagtcaagaacatcgtctgg
aagcgtcccaaggagatttgtgaaaacccacagttcattgtcggagacgctaacaggacg
gatatctgccagggagacctgggagactgctggttgctcgctgccattgcatgtctgact
ctgaacgacaagctgctatatcgtgttatacctcaagagcagagcttctctgaaggctat
gcgggaattttccatttccagttctggcgttatggtgactgggtggatgttgttgttgat
gaccgcattcccaccttcaacaaccagctggttttcaccaagtccgctgaaaggaatgaa
ttctggagtgctcttctggaaaaagcttatgctaaacttcatggctcctatgaggctctt
aagggtggaaacactgcagagggaatggaggacttcaccggtggagtgactgaattctat
gagatgaaggaggcaccgaaagagctgtacaagatcatgaagaaagctctggcgagaggc
tccctcatgggctgctccattgattccctggttccagcgcgctttgaaacccgtaccact
acaggtcttgtgaagggacatgcttactctgtcaccgctgtagaggagtgtaaacagtcc
ctgcagaaggagtctaaaattcgtctggtgcgtctgcgtaacccctggggtcaggtagaa
tggaacggaccgtggagcgataattcgaaagagtgggaaaccatctctaaagctgaaaaa
gagaaactccagcatcagaatgctgaagatggagaattctggatgtcatttgaggatttt
aagaaaaatttcacaaaaatagagatttgcaacttgacccctgatgctctggaggatgat
aagctacacaaatggacggtgtctgttaatgagggacgctggataagaggctgctctgct
ggaggatgcaggaactatccagacacattctggacaaatccacaataccgtctgcgtctt
ctggaggaagatgatgacccagaggatgatgaagttgcatgcacttttgttgttgctcta
atgcagaaaaacagacgtagagaacgcaagttgggtgcaaatctcttcactattggattt
tccatctatgaggtgccaaaggagatgcacggaaacaagcagcacatgcagaaggagttc
ttcacgtctaactcatctaaggcccgttccagggcgtacattaacctgcgagaggtgacc
cagcgtttccgtctgagtccaggggagtatgtcatcgttccctccacatacgagccccac
ctggaaggcgatttcatcctccgcgtcttctctgaaaggagaaatacctctgaggagata
gagaacaggattgaagctgatcatccagtgccggctccagcttcaactggggaagagagt
gaggaggaccagcagttcctgtccattttccagcagatcgcgggggacgtgagtactggg
gagccactgagcgaaggggggagtcaaatggagatctcagccaatgaactcaaaaatgtc
ttgaacaaggtggtgtctaaatacaaagacataaacactgagggtttcagtcgggagaac
tgtagaagcatgatcgccctcatggatatggatggaacgggaagacttaacctacaagag
tttagacacttgtggaacaaaatcaaacagtggcagggaatcttcaagcgctatgacttt
gatcatattggcactatcagcagctatgagatgagaaacgccatcaatgatgcagggttc
cgtctgaataaccagctgtatgacatcgtcaccatgcgctacgccaatgataacatgaac
gtcgactttgacagttttgtcagctgtcttgtacgactggaggggatgttcagagcattc
caagcctttgatcgaggtggagacggcaccatcagacttaatgtactggagtggctccag
ctaaccatgtatgcctag
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