Pimephales promelas (fathead minnow): 120464113
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Entry
120464113 CDS
T08155
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120464113
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120464113
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
SALM family
120464113
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120464113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_1
ig
LRR_5
LRR_9
fn3
Ig_2
LRRCT
Ig_C17orf99
Sp38
GP79
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
120464113
NCBI-ProteinID:
XP_039509390
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MAKVLCSLLLLGSAVMMTTACPKYCVCQNLSESLGTLCPSKGLLFVPLDIDRRTVELRLG
GNYIIKITQQDFTNMTGLVDLTLSRNTISFIQPFSFVDLETLRSLHLDSNRLTELGPDAL
RGLVNLQHLILNNNQLTHISKEAFDDLLLTLEDLDLSYNNLRGVPWDAIRKMLNLHQLSL
DHNLISHIAEGTFTDLEKLARLDLTSNRLQKLPPDPIFARSQTNTVLSTPFAPILSLSFG
GNPLHCNCEILWLRRLEREDDMETCASPPNLKGRYFWYVREEDFVCEPPLITQHTHKLLV
LEGQTASLRCKAVGDPMPLIHWVAPDDRLISNSSRALVYENGTLDIMVTTSKDYGTFTCI
AANAAGESTASIELSIIQLPHLSNGTNRTSQPKSRLSDITSSTKTGKGETKAQPEQIVSV
SEVTAVSALIKWTVSKVAPKVKMYQLQYNCSEDDVLIYRMIPAISKSFLVNNLMPGMQYD
LCVLAIWEDTATTLTATNIVGCVQFETSDEYPRCQSLNSQFLGGTMILVIGGVIVATLLV
FIVILMVRYKVNSGLQVSKLVTVSNTYSQTNGRPQAAQRANNAAPTPQTPKTVVVMRDEV
VEFKCGSLQSSISSSSSSSADSLGSGKVESYNRRGDSNTLPNRWKQSSSKARPNLDNLLG
AFASLDLRVPARDPGGPSSSGTMAMAMRPPTDKEPLLGRGDSGKLGTLVTLPSENKPKRS
HSFDMGDFGASQCLSYPRRISNIWTKRSLSVNGMLLQCDESEGEGEKATFDSSEWVMEST
V
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtgctctgcagcctccttctcctgggaagcgcagtgatgatgaccaccgcc
tgccctaaatattgcgtctgtcagaacctctcagagtccttgggcacattgtgtccgtcc
aaaggcttgctgttcgtgcccctcgacatcgacaggagaaccgtggaattacgtctggga
ggaaactacatcatcaaaattacccagcaggacttcaccaacatgacgggccttgtggac
ctcacactgtcacgaaacaccatcagcttcatccagcccttctcctttgtagatctggaa
acactgcgttcgctgcacctggacagtaaccggttgacagagcttggcccagatgccctg
cgaggcttggtgaacttacaacacctcatcctaaacaacaaccaactgactcatatctcc
aaagaagcattcgatgatctgctgctcaccttagaggacctagatctctcctacaacaac
ctgcggggtgttccctgggacgccattcgcaaaatgctcaatttacaccaactaagcctg
gaccacaacctcatcagccacattgccgagggcacttttactgatctcgaaaagcttgcg
aggttggatcttacatcaaaccgtctccagaagcttccgcctgatcccatctttgctcgc
tcacagactaacaccgtacttagtacaccgtttgccccgatcctgtctctcagctttggt
gggaatcctcttcactgtaactgtgagattctgtggttgcgccgcctagagcgagaggac
gatatggaaacatgcgcctcccctccaaatctgaaaggtcgctacttctggtatgttcga
gaggaagattttgtctgtgaaccaccgttaattacccagcatacccataagcttttggtc
ctagagggacagacggccagtttacgttgcaaggctgtgggtgaccctatgcctctcata
cattgggttgctccagacgaccgactaatcagtaactcatccagggctttagtgtatgaa
aatggtactttagacatcatggtcaccacctctaaggattacgggacgtttacttgtatt
gctgcaaacgcagcaggagaatcaacagcctcaattgagctctccattatccagcttccc
caccttagtaatggaacgaaccgcacatcacagccaaaatccagactatctgacatcacc
agctccactaaaaccggcaaaggggagaccaaagcccaaccagaacagatagtctcagtg
tcagaggtcacggcagtgtctgctctgatcaagtggacggttagcaaagtggcacccaaa
gtcaaaatgtaccagctccaatacaactgttcagaggatgatgtcctgatttataggatg
attccggctatcagcaaatccttcttggtcaacaacctgatgccagggatgcagtatgac
ctgtgcgtgttggccatctgggaagacaccgccaccacactcaccgcgaccaacatagtt
ggctgtgtgcaattcgagacgagtgacgagtacccccgctgccagtcactgaacagtcag
tttcttggaggaactatgatcttggtgattggcggagtgatcgtagccacgttgttggtc
tttatcgtcatcctcatggtccgctataaagtgaacagcggtttgcaggtttcaaagttg
gtgacggtgagcaacacctactcccagaccaatgggagaccacaggccgcacaacgagcc
aacaacgccgctcctacgccacagactccaaagactgttgtggtgatgcgagacgaggtg
gtggagtttaagtgtggctccttgcagagtagcatctcgtcctcttcgtcctcctcggct
gactccctcggaagtgggaaagtcgagtcttacaaccgacgtggggattccaacaccctg
cccaaccggtggaagcagtcgtcatccaaggcacggccaaacctggataacctgctcggg
gcgtttgcctctctggacctgagggttcccgcaagagatccgggaggaccgtcttcctcg
ggaaccatggcgatggccatgagaccccccactgacaaggagcctcttctaggccgagga
gattccgggaagctcgggacgcttgtaacgctgccatcggagaacaagcccaagcgcagc
cactcgttcgacatgggcgactttggtgcttcgcagtgccttagctacccacgacgcatt
agcaacatttggactaagaggagtctctcggtcaacggcatgctcctgcagtgtgacgag
agcgagggggaaggtgagaaagcaacatttgatagctctgagtgggtcatggagagtaca
gtctga
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