Pimephales promelas (fathead minnow): 120464177
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Entry
120464177 CDS
T08155
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120464177
04121 Ubiquitin system [BR:
pprm04121
]
120464177
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120464177
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120464177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
Motif
Other DBs
NCBI-GeneID:
120464177
NCBI-ProteinID:
XP_039509455
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MCKGLRPYSEVENEGFCFLMNILEPRFDIPSRKYFAEKIIPALYDETRAKVESALESAER
VGLTCDGWTSRATESYITFTVHFINKDWEMKSYVLQTRAINETHTGTHIADVLKAAVGEW
NLDAKKPVVVTDNASNMRVAMDLTGYQHVRCFAHVLNLASQRALKIAAVTKVLAKVRRIS
TFFHRSTTGAEALKRNQKILGLPLHKLITDMPVRWNSAYEMVSRFLEQQPAVCAALLSPE
VRKNVTDCALTENDISSAEEMVKALRPMLVATNIMCEEKNPTISVVAPLHSQLLRDTTST
EEDSPLVREIKGAINQDLSKRYQSEVEKDLLRMSSALDPRFKSLLFLSPEEVQDTHGKLV
SKAAALKDDDPVPCGDVQGDSEEEETCTAKKRKSALVDLLGQTFKKTSDVSTSATSIAEK
EIKQYQDAPSLPLTEDPLLWWKSQQHVFPLLSKLAHMHLCIPGTSVAAERVFSTAGDIIS
AQRSSLTPEHADQLLFLKKNMNI
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaagggctccgtccgtacagcgaggtggaaaacgaggggttctgctttttgatg
aatattttagagccacgctttgatattccctctcggaaatattttgctgaaaaaattatt
cctgcactttatgacgagaccagggctaaagtagagtcggcactcgagtcggcagaaaga
gtgggcctcacgtgtgacgggtggacatcgagagccacggagtcctacataacgttcact
gtacattttataaacaaagactgggaaatgaagtcatacgtcctgcaaacccgagcaatt
aacgaaacgcacactgggacacacattgccgatgtactgaaagccgcagtgggtgagtgg
aatcttgacgctaagaagccagtggttgtcaccgacaacgcatcaaacatgcgtgtagcg
atggacctaacaggataccaacatgttagatgttttgctcatgttttaaatcttgcatcc
caacgtgcgctgaaaatagctgctgttaccaaggtacttgcaaaagttaggaggatctca
acattcttccatcgaagcacaactggagcagaagcactaaaaagaaaccagaaaatcctt
ggcctccctcttcacaagctcatcacggacatgcctgttcgttggaatagtgcctatgaa
atggtctccaggtttcttgagcaacagccagctgtctgtgcagccctcttatcaccagag
gtgagaaaaaatgtgactgactgtgctctgacggagaatgacatctcaagcgctgaagag
atggtgaaagcacttagaccaatgcttgtggcaacaaatatcatgtgtgaggaaaagaat
cccaccatttcagtggttgctcctcttcattcccaactgctgcgagacacaaccagcact
gaagaagattcccctctggttcgagagattaagggagccatcaatcaagacctttcaaag
agatatcaatcagaggtggaaaaagatctcctacgcatgtcctcagccctggaccctaga
tttaaatcccttttatttctgtcacctgaagaagtccaagacactcatggaaaactagtg
tcaaaagctgcagctttaaaagatgatgatccagtgccttgtggtgatgttcagggggat
tcagaggaagaggagacctgtacagcaaagaaaagaaagtctgcacttgttgatcttctt
ggtcagaccttcaagaagacctctgatgtctctacatcagcaacctcaattgcagagaag
gagataaaacaatatcaagatgctccttctctgcctctcactgaagatccactgttgtgg
tggaaatctcagcaacatgtgttccctctcctctccaagctggcccatatgcatttgtgt
attcctgggaccagtgtagcagctgagagggtcttttcaactgcaggagacatcatcagt
gcccaaagaagttcactcactcctgaacatgctgaccaactcctttttctcaagaaaaac
atgaacatataa
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