Pimephales promelas (fathead minnow): 120464239
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Entry
120464239 CDS
T08155
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120464239 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
120464239 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
NACHT
Beta-prop_EML
AAA_16
nSTAND1
NPHP3_N
PEP5_VPS11_N
DUF4062
NPHP3
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ATPase_2
Beta-prop_Nup120_160
Beta-prop_RIG_2nd
AAA_22
Beta-prop_SCAP
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
AAA
APAF1_C
Bac_DnaA
Motif
Other DBs
NCBI-GeneID:
120464239
NCBI-ProteinID:
XP_039509550
LinkDB
All DBs
Position
Unknown
AA seq
1619 aa
AA seq
DB search
MAVVEMSKALGLEALRGQSTDDLQPVSRMVRVFISSTHSDMKNERNAFWEKAYSELQAHC
QSLGLVFELVDLRCGVFDTIPDDHLTTELSIKEIETCQRISVGPTFIALLGNQYGHRPIP
YIIPETEFESLVSKLSKDSESLMLLNQWFSKDSNSVPPTYIFQPITAHYPHYNDRGPESG
KLRDNDVISWNLTESRLLQALRTAAQQAERDGDITVDHKHKFFKSVLEYEMEHGFLKTQG
EASAVLFIRELPRLSKRECKKNFGKFLLDVTADGLLDTEARELLADLKQRICNTDRLQPL
RMELSKGAMNPSRKEHKEYLKNLCEQVSSQMKKLIVRNALQASGYSTVDPGWSWLKQELF
HHTMLSEEKCSVFKGRDSILGKICITMWESTNSCHEPLLVHGPSGVGKTALLCKLAQEMR
GVDNRGIVVLRLLGTSPLSSDVDSVLRGVCLQVCGASGLQFPHPHIANSHEELVRFFHST
MEDVSKQGDTLLLILDAVDQLLEANKSLNLDWIPKAIPPNVHIVLSTSDDCVEKCKSLVS
AEQNIFRVELLTDVQGKDVIDAYMGAAGRKLNSEQMDTILHSFQESGSPLHLKLMLDIAK
QWSSWTSMSSSHLGISAQEVMTQFLQSLEENHGKKLVSHALSFILLSRHGLSEAELQDVL
SLDNDVLAEIYKYRLPPSHTLLRFPRLHWSRLRHDLRDHLAERWEGGVILLGFAHRQFTE
LVRKRYLSREVKTGMHSILAEYFSGKWSNGKLRPILLPSLTTLLNADRKVPLQPLWFTGE
IANLRKLHELPHHLAHAGEWEELRQSVLGSLDWLRCKTQQCGVSCIIQDLSLCTDLTECL
EIQMLKETFLLIKPSLDFSDGHVDPSHLVTEIFTRLQGLADLYPSMIGQLCAQCVDWFGS
CTDPVLVPKCSFFQAPGGPLKGTLTGFTKGVKTVVVCSKRELVVAGSEDGLIIVWSLSHL
GTLHTLSGHTAGVLSLKMMDKTNNCLSTALDGTLRKWCLISGQQLFCIADAVSVQTHTPA
HVYLIEERKIIITNPNSLVKAWHLDTAEPLYEVTAEVCSVLGVVGDAVACICSEGTLCFY
DISTGVQNSQTPLPCSFGHRNITCSLTLTKYPKILIAFGEGRLHSVWSQGIESVVDLPTP
ALFLRTSEDEKLIFAGCDRTLCVFLVTLTSMHKVLDLQHDATVLCVVSSSEGSKIITSAQ
DRIIRVWGVTTGALLDWIGVVDSAVSTLAVHQSTVISASVIVNQLKVWQLDYNNKHRSKC
FIPAYCPLVVLSKDGDTLFYVKEGNKTEVFTWSCSEGLRTESMDVSSEVCCMELAQQKKL
LFCGLRTGTILIYPLDFAQETLCVPPPESLPTVRSIAISPREDKMAVAYEDAVCLFEITE
RDSFPSVEGPFQRYSLCLLHSPISAMVLLSDSRLLYGTFGGEVVIYDFKSATTAELDHHG
AAITCITMSNWDMQALIASQDCVQKLWNLSPVFLNHTMEYKGFYFEGVLCAVFSLNDKYV
FTGSLDKTIKVWDVSSGCLLYIQYVYSPVIKMMPHTDGFVAVSQHGSIIKEGFRCPDSLK
PGYNPLCNFRAHYQVTSREKSLNAPHTEIKMVPDFNPAQFNFIGIGLMKTKPSNTCVLF
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtggagatgagcaaagctcttggattggaggctctacggggacagagcact
gatgatctacaacctgtttccagaatggtgcgagtgttcatcagctccacacactcggac
atgaaaaatgagcgaaatgcattctgggaaaaggcttattctgagttgcaggcccactgc
caaagtttgggtctcgtctttgagttagtggatctcaggtgtggagtgtttgacaccatt
ccagatgaccatttgacaacggaactgtccattaaagaaattgaaacctgtcagagaata
tcagttgggccgacttttattgctctgctcggtaatcagtacggccatcgccccatccca
tacattataccagaaacggagtttgagtcgctggtatcaaaactctccaaagattcagag
agtttaatgctccttaaccaatggttctccaaagacagtaactcagtcccacccacatat
attttccagccaatcacagctcactatcctcattacaatgacaggggtcctgagagcgga
aagttgcgtgataatgatgtcatatcctggaatctgacagagtcacgactgctgcaggct
ctccgcactgctgcccaacaggctgagagagacggggatatcactgttgaccacaagcac
aagtttttcaaatctgtcttagagtatgaaatggagcacggctttctcaagactcaaggc
gaggcatcagctgtgctttttattcgtgaactgcctcgactcagtaaaagagaatgcaag
aaaaactttggaaagtttcttctggacgtcacagctgacggcttgcttgacacagaagca
cgggagctcttggcagacctgaagcaacgcatctgcaacacagatcgcctccaacctctc
cgcatggagctcagcaaaggagctatgaacccgagccgcaaagagcacaaggaatatctg
aaaaacctgtgtgagcaggtatcatctcaaatgaagaaactaatcgtcaggaacgctctg
caagcgtcaggttatagcacagtagatccaggatggtcctggttgaaacaggagctcttt
catcacaccatgctgagcgaggagaagtgttctgtgtttaaagggagggacagcattctt
ggaaagatctgcatcaccatgtgggagtccactaactcttgccatgaacctcttctggtt
catggaccttcaggggttggtaaaacagctctgctttgcaaactggcacaggaaatgcga
ggtgttgataatcggggaattgtggtgctgaggttgctgggaacatctccactcagctca
gatgttgactctgttctcagaggtgtatgtcttcaagtgtgtggagcttcagggttgcag
ttcccccacccacatattgccaactcgcatgaagagctagttcggtttttccattccacg
atggaagacgtgtcaaagcaaggagacacgcttctactcattctagacgcagtggaccag
ctgttagaggcaaacaagtctcttaatctagattggatacctaaagcgatcccacctaat
gtacacattgtgctctctacttctgatgactgtgttgagaaatgtaaatctttggtttca
gcagagcaaaacatctttagagtggaacttctcacagacgttcaagggaaagacgtcatc
gatgcctacatgggcgcagctggacgcaagctgaactcagaacagatggacaccatctta
cacagcttccaggaaagcggaagccctttgcatctgaaactcatgctagacattgctaaa
cagtggtcctcctggacctccatgtctagttctcacctgggcatctctgcacaggaggtg
atgacacagtttttgcaatcacttgaggagaatcatgggaagaaactagttagtcatgct
ttgagcttcatattgttatcaagacatggactatcagaggcagagttacaagatgtcttg
tcattagataatgacgttctggccgagatctataagtaccggcttcctccaagccacaca
ctcttgcggttcccacgtcttcattggtcacgtctccgacatgacctgagagatcatctg
gcggagagatgggaagggggtgttattctactgggtttcgctcacaggcagttcacagag
ctggtaagaaagagatatttgtcacgtgaggtgaaaactggcatgcactccatccttgcc
gagtatttctcaggaaagtggagtaacgggaagctcaggcctattcttctgccctcgcta
accacactgctaaatgctgacagaaaggtaccactccagcccttgtggtttactggagaa
attgccaatttacggaagcttcatgaactgccccatcacctcgctcatgcaggcgaatgg
gaggagctacgccaatcagtgctcggcagtctggattggttgcgttgtaaaactcagcag
tgtggcgtgagctgtattattcaggacctatcgctttgcactgatctcacagaatgtctt
gagatacaaatgctgaaagaaacatttctgctgattaagccctcattagattttagtgat
ggccatgttgatccctcacatttggtcacagagatcttcaccaggctacagggccttgct
gatctctacccctctatgattggtcagttgtgcgctcagtgcgtggactggtttggatcc
tgtactgacccagtgcttgtgcccaaatgcagcttttttcaggcccctgggggcccacta
aagggcaccctcacagggttcactaaaggggtaaagactgtcgtggtatgctcaaagagg
gagctggtggtagcggggtcagaggatgggctgatcatagtctggagtctaagccatcta
ggaactcttcatactctttctggacacacggctggggtgctgtccctgaagatgatggat
aaaaccaataactgtctgtctactgcactcgatggcacactaagaaaatggtgtctgata
agtggacaacagcttttctgcatcgctgatgcagtgtctgtccaaacacacacccctgca
catgtctatttgattgaagaaaggaagattataataaccaacccaaacagcctagttaaa
gcttggcacttggacactgccgagcccctgtatgaggtgaccgcagaggtttgttctgtt
cttggtgttgtgggagatgccgtagcatgcatatgcagtgaggggacactctgtttttat
gacatatccactggcgtgcagaattcccagacccccctaccctgctcttttggacaccgc
aatatcacctgctctctgacactcaccaaataccccaagatactcattgcttttggggaa
ggccgtctacattcggtatggagccaaggaattgagtctgtggttgatcttcccactcca
gctttgttcctcagaacatctgaggatgaaaaactgatttttgcaggatgtgacagaaca
ttgtgtgtattccttgtgacactgacttcaatgcataaggttctggatcttcaacatgat
gcgactgtcctgtgcgtggtctcgagcagtgaaggtagcaaaatcatcacaagtgcccag
gatcggattatacgggtgtggggtgtaactacaggagccctgctggactggatcggtgtg
gtggattctgctgtgtctactttggctgtacatcagagcactgttatctctgcctctgtt
attgtcaaccagctcaaagtatggcagctggactacaacaataagcacaggagcaagtgt
ttcatcccagcatactgccccctagtggtcctgtcgaaagacggtgatactctattttat
gtcaaggagggaaataaaacagaagttttcacctggagctgttcagaaggtctacggaca
gagagtatggacgtgtcctcagaagtgtgctgtatggaattggcccagcagaaaaaacta
ctcttctgtggactgcggactgggaccatccttatttacccattggactttgcccaagaa
accctgtgcgtgccaccaccagaaagcctaccgacagttcgcagcatagctatcagtccg
cgggaggacaaaatggctgtggcatatgaggatgcggtctgtctgtttgagattacagaa
agggacagtttccccagtgtggaaggtccatttcagaggtactccttgtgcttactgcat
tccccaatctccgccatggttctgctgtccgactccaggttgctctatgggacctttggt
ggtgaagttgtaatctatgactttaaaagcgccacaacagccgagctggatcaccatggg
gcagccataacctgcatcaccatgagcaactgggacatgcaagcgctgattgcctctcaa
gactgtgtccagaagttgtggaatctgagtcccgtctttctgaatcacaccatggagtac
aagggtttttattttgaaggcgtcctttgtgccgtcttctcactaaatgataaatatgtc
ttcactggatccttggacaaaaccatcaaagtctgggatgtctctagtggttgtttgcta
tacattcagtacgtctactctccagtcataaagatgatgccacacacggatggatttgta
gccgtgtcccagcacggatctatcatcaaagaaggcttccgctgtccagacagcctcaaa
cctggatacaaccccctctgtaacttccgagcacattaccaagtcacctctcgggagaaa
agcctgaatgctccacacaccgagatcaagatggtgccggattttaaccctgctcaattc
aatttcatcggcatcggtttgatgaaaactaaaccatctaacacgtgtgttctcttctaa
DBGET
integrated database retrieval system
