Pimephales promelas (fathead minnow): 120464358
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Entry
120464358 CDS
T08155
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04136
Autophagy - other
pprm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120464358
04136 Autophagy - other
120464358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120464358
03029 Mitochondrial biogenesis [BR:
pprm03029
]
120464358
Membrane trafficking [BR:
pprm04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120464358
Mitochondrial biogenesis [BR:
pprm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120464358
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
BCAS3_WD40
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_RSE1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_Aladin
CNH
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
RMC1_N
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
120464358
NCBI-ProteinID:
XP_039509708
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MIEPMPEFGTGEKIRRLGSDGSPDLQRLSCASFNQDTTSLAVGCKNGYRLFSLSSVDRMD
CIHQGEESPDVCVAERLFSSSLMVIVSRSTPFRMNIIHFKKRTEICNYSYSSHILAVKLN
RQRLVVCLEEALYIHNIKDMKLLKSVLNTPPNPKGLCALSVNHSNSYLAYPGSVTAGRIA
LYDAGNLTEVTVIPAHSSHVAAVAFSASGSSLASASEKGTVIRVFSVPDGDKLFEFRRGM
KRYVSISSLSFSADAQFLCASSNTETVHIFRLQHHSPSTESPSWSGYMGKMFSAASSFLP
SQVSDMMHQDRAFASVHLSAAGMKNISALSMIQKVPRLLVASLDGHLYIYNLDLQEGGDC
RLVQKHRLYESADENPAASTLEAGGLSYAETVSTNTNQHSSSLTGYSEDGGVKTGELIPD
HEFADESLRLDDEQEFPPVSFQDT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaccgatgccagagttcggaaccggagagaagattcgaagactcggttctgat
ggatctccggatctccagagactctcctgcgcttccttcaaccaggacacgacgtctttg
gctgttggttgtaagaatggctacaggctcttctctctgtcgtctgttgacagaatggat
tgcattcatcaaggagaggaaagtcctgatgtgtgtgttgcggagcggctgttctccagc
agtctgatggtgatcgtgagcagatctacaccgttcaggatgaacatcatccacttcaag
aagcgcacagagatctgcaactacagctactccagccacatcctcgcagtcaaactcaac
cggcagagactcgtggtttgtttggaggaggctctgtacatccataacatcaaggacatg
aaactcctgaagtctgttctcaacacgccaccaaaccccaaaggactctgcgctttatct
gtcaatcattccaactcatacctggcctatcctggcagcgtcaccgctggacgaatcgcc
ctgtatgatgctggcaatctgacggaggtgaccgtgatcccagctcactccagtcacgtg
gccgccgtggctttcagcgcttcaggatccagtctggccagcgcctctgaaaaaggcact
gtcatacgagtcttcagcgttcctgatggagacaaactgtttgagtttcgccgagggatg
aagaggtatgtcagcatcagttcgctgtcgttcagtgccgacgctcagtttctatgtgcc
tccagtaacacagagactgttcacatcttcagactgcagcatcacagtcccagtacggag
tctccctcctggtctggatatatggggaagatgttttctgccgccagctcgttccttccg
tctcaggtgtcggacatgatgcatcaggacagagcgtttgctagcgtccacctcagcgcg
gcgggcatgaagaacatctccgctctctccatgatccagaaggttcctcgtcttctggtg
gcttcactagatggtcatctctacatctacaacctcgatctgcaggaaggaggagactgt
cgtttagtccagaagcaccgactgtatgaaagtgcggatgaaaacccggcggcgtcgacg
ctggaggccggaggtttatcctacgcagaaactgtttccacgaacaccaatcagcactcg
agttccctcacgggctactctgaggatggaggagtgaagacaggagaactgatcccagat
cacgagtttgccgatgaatcgctccgtctggatgatgagcaggagtttcctccggttagc
tttcaggacacctga
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