KEGG   Pimephales promelas (fathead minnow): 120464370
Entry
120464370         CDS       T08155                                 
Symbol
tob1b
Name
(RefSeq) protein Tob1b
  KO
K14443  protein Tob/BTG
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120464370 (tob1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprm03019]
    120464370 (tob1b)
Messenger RNA biogenesis [BR:pprm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120464370 (tob1b)
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     120464370 (tob1b)
SSDB
Motif
Pfam: BTG PAM2 SinI T2SSM
Other DBs
NCBI-GeneID: 120464370
NCBI-ProteinID: XP_039509739
LinkDB
Position
Unknown
AA seq 313 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKKKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEEAAKESGLDIEDVRNNLPQDLSVWIDPFEVSYQIGEKGAVKVLYVDDNGEN
GSELDKEIRNSFNPEAQVFMPITDPVGVSSESSSPSPPPFGQSASVSPSFMPRSNQPLTF
TTASFAATKFGSTKMKNGGRNGGKVSRNSPTNLGLNVNNLIKQKAISNSMHSLYGFGLGS
SSALSPNAKEFVFPNLQGQGSFPSENAISPQPYSNAFDVFSAYGNDKSLMDGLSFSLGNM
QYSNQQFQPVMAN
NT seq 942 nt   +upstreamnt  +downstreamnt
atgcagcttgaaatccaagtagcgctgaacttcatcatttcgtacctgtacaacaaactc
ccacgacgacgagtcaacatattcggcgaagagttggagaggcagttgaagaagaaatac
gaaggacattggtacccagacaagccatataaaggatccgggttcaggtgcatacacgtg
ggcgagaaagtagatccggtcgtggaggaagcagccaaagaaagcgggttggacatcgaa
gacgttcggaacaacttgcctcaggatctcagcgtttggatcgaccctttcgaggtttcc
taccagatcggcgagaagggagccgtcaaggtgctatacgtggacgacaacggcgaaaac
ggctccgagctggacaaagaaatcagaaacagttttaacccggaggctcaggtcttcatg
ccaatcacggatccggtgggcgtgtcctccgagtcgagttcgccatcaccgccaccgttc
ggccaatcggcatccgtcagcccgtctttcatgccacgatccaaccagcctttgacgttc
accaccgcgtccttcgccgccaccaagttcggctccactaagatgaagaacggcgggcgt
aacggcgggaaagtctcccgcaactcgcccaccaatctcggcctgaacgtcaacaaccta
atcaagcaaaaagccatttccaactccatgcattcgctctatggattcggccttggaagc
tcgtcggctttgtctcccaacgcgaaagagttcgtgttcccgaaccttcaaggacaaggg
agcttcccgagcgagaacgccatcagccctcagccgtacagcaacgccttcgacgtgttc
tccgcgtacgggaacgacaagtctctcatggacggcttgagcttcagtctcgggaacatg
cagtattccaaccagcaattccagccggtcatggctaactaa

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