Pimephales promelas (fathead minnow): 120464415
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Entry
120464415 CDS
T08155
Name
(RefSeq) tripartite motif-containing protein 35-like
KO
K12012
tripartite motif-containing protein 35
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120464415
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120464415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
U-box
zf-Nse
zf-RING_5
Apolipoprotein
Prok-RING_4
Fib_alpha
zf-RING_10
RING_XB3-XBAT31
AP1AR
DUF4200
HJURP_C
Exonuc_VII_L
AAA_11
FapA
ALMT
MYO6_lever
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120464415
NCBI-ProteinID:
XP_039509824
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MDSKSVEELSCPVCCEIFKVPVFLSCSHSFCKECLQQFWRTKETQECPVCRRRSSRDEPP
VNLTLKNLCESFLKERNEKRSSGSEEICSLHSEKLKLFCLEHKQPVCLVCINSQKHDNHK
FRPISEVVSSYKEEFNTALTSLQNKLKHGEEVKKKCDETIEHITSQAEHTERQIKEEFEK
LHQFLRDEEEATITALREEEEQKKQRMKEKLEEMNTHISALSHTLRDMEEMMKDNDVSFL
KNYKVWMERVQISQPDPRMSSGALIHVSRYLGNLPFRVGKKMLETVQHTPLTLDPNTAHR
HLTLSADLTSVSFSDEDKTLPDNPERFDYYPCVLGSEGFNSGTHCWDVEVGDNTDWGLGI
TTASNQRKGQDFSKSNVWCVDYMDSEYGSQSPEQRLTVFTVKQKLQRVRVQLDYDRETVS
FSDPVTNTHLRTFRTSFTETVFPFLYNRRTTPLRILPVKLFITAENHS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaaatctgtggaagagctttcttgtcctgtttgctgtgaaatcttcaaggtt
cctgtttttctgtcctgtagtcacagtttctgtaaagagtgtcttcaacagttctggaga
actaaggaaactcaggagtgtcctgtctgcaggagaagatcctcaagagatgaacctcca
gttaatctcacattaaaaaacttgtgtgagtcgttcctgaaggagagaaatgagaaacgt
tcatcaggatctgaggagatctgcagtttacacagtgagaaactcaaactcttctgtctg
gagcacaaacagcctgtgtgtttagtgtgtattaattcacaaaaacatgacaatcataaa
ttcagacccatcagtgaagtggtttcatcatataaggaggaatttaatacagcactgacg
tccttacaaaacaagctcaaacatggagaagaagtgaagaagaagtgtgatgaaacaatt
gaacacatcacgtctcaagctgagcacacagagcgtcagattaaagaagagtttgagaag
cttcatcagtttctcagagacgaagaagaagctacaatcactgcactgagggaggaagag
gagcagaagaagcagaggatgaaggagaagctggaggagatgaacacacacatctcagct
ctttcacacacactcagagacatggaggagatgatgaaagacaatgacgtctcgtttcta
aagaactataaagtctggatggaaagagtccagatctcacagccggatccacggatgagt
tctggagctttgattcatgtgtcgcgttatctgggtaacctgccgttcagagtcgggaag
aagatgctggaaactgtccaacacactccgttgactctggatccaaacacagcacatcgt
catctcacactctctgctgatctgaccagtgtgtcgttcagtgatgaagataaaacactt
cctgataatccagagaggtttgactattatccatgtgtcctgggatctgagggctttaac
tcaggaacacactgctgggatgtggaggttggagacaatacagactggggtcttggaata
accacagcatcaaaccaaaggaagggacaggatttctctaagtctaatgtctggtgtgtg
gattacatggacagcgaatacggctcacagtccccagagcaacgcctcactgtcttcact
gttaaacagaagctccagcgtgtgagagttcagctggactatgacagagaaacagtgtca
ttctctgatcctgtaactaacacacatttacgcacattcaggacatccttcacagaaact
gtctttccattcttatataatcgccgcacaactcctctgaggatcttaccagttaaactg
tttattacagcagaaaatcacagttaa
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