Pimephales promelas (fathead minnow): 120464470
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Entry
120464470 CDS
T08155
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120464470 (smc4)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
120464470 (smc4)
Condensin II
120464470 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Crescentin
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
120464470
NCBI-ProteinID:
XP_039509913
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MPAKTSKSSTASRRAAEARDACDGDSDDGAAKSVTAPGRAHGNAAEVCVGEPVEVLDQRS
LQEILESVPPPPPPAMSSEPGAPRLMITHIINRNFKSYAGEQILGPFHKRFSCIIGPNGS
GKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDEHPDLQSCTVEVHFQKIIDQEGDDYDV
IPNSSFYVSRTAGKDNSSAYHISGKKATFKDVGVLLRSHGIDLDHNRFLILQGEVEQIAM
MKPRGQTEHDEGMLEYLEDIIGSCRLKEPIHLLCRRVELLNEQRGEKLNRVKLVEKEKSA
LEGEKNKAVEFLTLENDIFKKRNLLCQFYVHDLQKRASAKEAEKQQIQEDTKELSDRSSQ
LTEEVKAKNEELKAVEKKLTKLTKFIESQKEKFTQLDLQDVEVREKLKHTKSKTKKLQKQ
LQKDKEKLEELKGVPASSESIITQASAQKQQLEEQKLQEEHALALVMESLKEETSGLQDD
KQKQEQQLLELSKAVNETRSRMDVAQSELDIYLSQHTSAVSQLAQAQSALQEAVNTLRER
RAAIKDLHVKIPQCEEQLQKDEQELQQISEQDQQKRAQVGDLRQKVCEAKSSLSSNRSRS
KVLDALMQQKRSGKITGILGRLGDLGAIDEKYDVAISSSCGSLDNILVDTIDTAQKCVTF
LKAQNIGVATFIGLDKMKVWQQSMGPISTPDNIPRLFDMVRVKDESVRPAFYFALRDTLV
ARDLEQATRVAFQKDKRWRVVTLQGQVIEQAGTMTGGGGRVMKGRMGSSVCADVTQEQLD
KMESALSAEVTQLQDWQQRRQQLEEKVHTARSQLRDMKNTLEKYSATIQSLTEQELHLKT
QIKQLEANVISAAPDKAKQKQLEKSLAGYRKDFEAASSKAGKVEAEVKRLHTLIVDINSH
KLKAQQDKLDQINTQLDQCSSAVTKAQVAIKTAGRNLKKSEESVCQLEQEMGENAALMEQ
LTEQLKKLEEQAGDIMHTYQQAEEALPELQEQHRGVLQEIKALQEQEHALQKESLSVRLK
VEHIDTAIAECHSKIRHWEKEAGRLALHPMDGSPPEELPTLTPDQLADLGSPDVIKNEIA
LLEDRCANMKPNLGAIAEFKKKEELYLQRVAELDDITTQRDAFKRGCEDLRKQRLHEFMA
GFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIYNLSGGEKT
LSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFE
MADRLIGIYKTHNTTKNVAINPKTIVLREIETA
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgaagaccagcaagagctcgacggcctcccggagagcggcggaggcgcgggac
gcgtgcgacggcgatagtgatgatggtgccgcgaagagcgtcactgcaccgggccgcgcg
cacgggaacgctgcagaagtgtgtgtgggcgagccggtggaggtgctggaccagcgcagt
ctgcaggagatcctggagagcgtgcccccgccgccgccccccgccatgagctccgagccc
ggggcgccgcgcctcatgatcacacacatcatcaacaggaacttcaagtcctacgccggg
gagcagatcctgggccccttccacaagcgcttctcctgtatcatcgggccgaacggcagt
ggcaagtccaacgtgatcgactccatgctgtttgtgttcggctaccgggcccagaagatc
cgctccaagaagctgtcggtgctgatccacagctcagacgagcaccccgacctgcagagc
tgcactgtggaggtgcacttccagaagatcatcgaccaggaaggagacgactacgatgtc
atccccaacagctccttctatgtgtccaggaccgctggcaaagacaactcgtccgcctac
cacatcagcggcaagaaggccaccttcaaagacgtgggagtgttgctgcgcagccacggc
atcgacctggaccacaaccgcttcctcatcctgcagggggaggtggagcagatcgccatg
atgaagccccgggggcagacggagcacgacgagggcatgctggagtacctggaggacatc
atcggctcctgccggctcaaggagcccatccacctgctgtgccgccgggtcgagctcctc
aacgagcagcgcggagagaagctgaaccgagtgaagctggtggagaaggagaagagcgct
ctggagggagagaagaataaagcggtggagttcctcaccctggagaacgacatcttcaag
aagaggaacctcctctgccagttctacgtgcatgatctacagaagcgtgcgtcggcgaaa
gaagcggagaaacagcagattcaggaggacacgaaggagctgagtgaccgaagcagccag
ctgaccgaggaggtgaaggccaagaatgaggagctgaaggctgtggagaagaaactgacc
aagctgaccaagttcatcgagagtcagaaggagaaatttacccagctggacctgcaggac
gtggaggtgcgcgagaagctcaaacacaccaagagcaaaaccaagaagctgcagaaacag
cttcagaaagacaaggagaagctggaggagctgaagggtgtgcccgccagcagcgagagc
atcatcacgcaggcgtctgcgcagaagcagcagctggaggagcagaagctgcaggaggag
cacgcgctggcactggtgatggagagcctgaaggaggagaccagcggcctgcaggacgac
aagcagaagcaggagcagcagctgctggagctgagcaaggcggtgaacgagacgcgctcg
cggatggacgtggcccagtctgagctggacatctacctgagtcagcacaccagcgccgtc
agccagctcgcccaggcccagagtgccctgcaggaggccgtgaacacgctgagagagagg
cgagccgccatcaaggacctgcacgtcaagatcccgcagtgtgaggagcagctccagaag
gacgagcaggagctgcagcagatctctgagcaggaccagcagaagcgagcgcaggttggg
gacctgagacagaaggtgtgtgaagccaagagctctctgtccagcaaccgcagccgcagc
aaagtgctggacgccctcatgcagcagaagcgctcgggcaagatcaccggcatcctggga
cggctgggggatctgggagccatcgacgagaagtatgacgtggccatctcctccagctgt
ggctcgctggataatattctagtggacaccattgacacggcgcagaagtgcgtcacgttt
ctgaaggcccagaacatcggtgtggccactttcatcggtctggacaagatgaaggtgtgg
cagcagagcatgggccccatctccaccccggacaacatccctcggctgttcgacatggtg
cgcgtgaaggacgagagcgtgcggccggcgttctacttcgcgctcagggacacgctggtg
gccagagatctggagcaggccacgcgagtggcgttccagaaggacaagcgctggcgggtg
gtcacgctgcagggccaggtcatcgagcaggccggcaccatgaccggaggaggagggcgt
gtgatgaagggccggatgggctcctccgtctgcgctgatgtcactcaggagcagctggat
aagatggagagcgccctgagcgcggaggtgacgcagctgcaggactggcagcagaggcgg
cagcagctggaggagaaggtgcacaccgcccgctctcagctgagggacatgaagaacacg
ctggagaagtactccgccaccatccagagcctgaccgagcaggagctccacctcaagacg
cagatcaaacagctggaggccaacgtcatctccgccgcgcctgataaagccaagcagaag
cagctggagaagagcctggccggctacaggaaagacttcgaggcagcgtccagtaaagca
gggaaggtggaggccgaggtgaagcggctgcacacactcatcgtggacatcaacagccac
aagctgaaggcccagcaggacaagctggaccagatcaacacccagctggaccagtgctcc
tccgccgtcaccaaagcccaggtggccatcaagactgccggacgtaacctgaagaagtct
gaggagagtgtgtgtcagctggagcaggagatgggcgagaacgcggcgctgatggagcag
ctgacggagcagctgaagaagctggaggagcaggccggagacatcatgcacacctaccag
caggccgaggaggctctgccggagctccaggagcagcaccgcggcgtgcttcaggagatc
aaggccctgcaggagcaggagcacgcgctgcagaaggagtccctgagcgtgcggctgaag
gtggagcacatcgacacagccatcgcagagtgccacagcaagatccgacactgggagaag
gaggccggccggctggcgctgcaccccatggacggctctcccccagaggagctgccgacg
ctgaccccggatcagctggcggacctcggcagccccgacgtcatcaagaacgagatcgct
ctgctggaggaccgctgcgccaacatgaagcccaacctgggggccatcgccgagttcaag
aagaaggaggagctgtacctgcagagggtggcggagctggatgacatcaccacacagaga
gacgccttcaagagaggctgtgaggacctgcgcaagcagcggctgcacgagttcatggcc
ggcttcaacatcatcaccaacaagctgaaggagaactaccagatgctcacgctagggggc
gacgccgagctggagctggtggacagcctggaccccttctctgagggcatcatgttcagt
gtgcgtcctcctaagaagagctggaagaagatctacaacctgtcgggaggagagaagacg
ctcagctctctggcgctggtgttcgccctgcaccacttcaagcccacgccgctctacttc
atggacgagatcgacgccgcgctcgatttcaagaacgtctccatcgtggcctgctacatt
tacgaacagaccaagaatgctcagttcatcatcatctccctgaggaacaacatgtttgag
atggccgaccggctcatcggcatctataagacgcacaacaccaccaagaacgtggccatc
aaccccaagaccatcgtgctgcgcgagatcgagacggcctga
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