Pimephales promelas (fathead minnow): 120464556
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Entry
120464556 CDS
T08155
Symbol
otol1b
Name
(RefSeq) LOW QUALITY PROTEIN: otolin 1b
KO
K24214
otolin-1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120464556 (otol1b)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
120464556 (otol1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
120464556
NCBI-ProteinID:
XP_039510029
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All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
TFLFFLYRXKMGMLCVHTSFLIVIVLTFIPSCDTFKPTQRPKYQYTKKPPREVVQTTVYA
AKTTVTARIVDHTKPRERFPAYITESTTVPADSYIDYPTDTTVSPTTAKDNYTLDYNECY
FNFCECCPPEKGPQGFKGDIGLPGIPGEKGTPGPKGLPGQIGPKGLSGSKGDKGEKGDQG
NIGVTGPPGNQGKAGMKGEMGIKGEKGAAGLTGFKGSKGEKGDPNLNVSKGDQGDPGKDG
PPGPQGMTGEKGEKGDRGECGLLGERGQKGEQGDPGPPGMRGDPGPSGQHGMHGTPGIAG
ERGEPGIPGAKGEPGARGPTGTKGIRGLRGIKGDRGPQGKRGDRGLQGMKGAMGQSDSRV
RSAFSVGLYPSKSFPPSGFPVRFDKIFYNGENHYDIVTSKFNCTYSGVYVFSYQITVRNK
PLRASLVVNGVRKVRSRDTLQGQDIDQASNLVILKLDVGDQVWVETLRDWNGVYSSSEDD
STFSGFLLYPD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
acatttctcttctttctctacagatagaaaatggggatgctctgtgtacacacttccttc
ttaattgtaatagtactgacctttataccctcgtgtgacacattcaagcccactcagagg
ccaaagtaccaatacaccaagaaaccccctagagaggtggtccaaactacggtatatgca
gccaagactacagtcacagcacggattgtggaccacaccaaaccaagagagcgcttccct
gcatacatcacagagagcacaacagttcctgccgacagctatatagactaccctacagac
accaccgtatctcccactacagcgaaagacaattacacgctagactacaatgaatgctac
ttcaacttctgtgagtgctgccctccagagaaaggcccacaagggttcaaaggagacata
ggacttccaggcatacctggggaaaagggaacacctggacctaaaggtctaccaggtcaa
atagggccaaagggcctttcaggatctaaaggggataaaggagagaaaggtgatcaagga
aacataggagtcacaggacctcctggcaaccagggaaaggccggaatgaaaggtgagatg
ggtattaaaggtgagaagggtgcagctggactgacaggattcaaaggttctaaaggggaa
aaaggagatccaaatctgaatgtgtcaaaaggtgatcagggagatccaggcaaagatgga
ccaccaggaccccaaggcatgactggtgaaaagggtgaaaaaggggatagaggagagtgc
gggttactaggtgagaggggccagaaaggtgagcaaggtgaccctggaccaccaggtatg
cgtggagacccaggtccatctggacaacatggcatgcacggaactccaggcattgccgga
gaacgtggagaaccaggaattcctggagcaaagggagagccaggagcacgtgggccaaca
ggaaccaaaggtataagaggtctgaggggaataaagggtgaccgcggcccccaagggaaa
cgtggagaccgaggcctccagggaatgaagggtgctatgggtcaaagtgactcaagagta
cgttctgctttcagcgttggcctatatcccagcaagtcttttcctccttcgggatttcca
gttcgcttcgacaagatcttctacaacggagaaaaccattatgacattgtcacaagcaaa
ttcaactgcacctactcgggagtttatgtgttctcctaccagatcacggtgagaaacaag
ccacttcgtgcttctttggtggtgaatggcgtgcgtaaggtacgttcgagggacactcta
caaggtcaagacattgaccaggcatccaatctagtgatcctgaagctagatgtcggagac
caggtatgggtagagacgctaagagactggaatggtgtctactctagcagcgaggatgac
agcaccttctctgggttcttgctctaccctgactaa
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