Pimephales promelas (fathead minnow): 120464719
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Entry
120464719 CDS
T08155
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120464719
04121 Ubiquitin system [BR:
pprm04121
]
120464719
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120464719
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120464719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
hAT-like_RNase-H
YscO
Motif
Other DBs
NCBI-GeneID:
120464719
NCBI-ProteinID:
XP_039510154
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MATGGAAVVTALVDKKGGKSHVWKHFGFAADDEGNIIDPQKPICKRCHRSFLSKAGNTSN
LIKHLKDRHPDLMKEFKQMQGEEDHETPQQTLKQPTVTEAFQRQQKYDKNSPEARKLNRA
VAEFICMDKVPIYTVQKCGFQQLLHHFNPKYQLPSRNFFMYTEIPRIYNDTRDLIMQHLG
EKPFYSCTTDLWTSRTADTFMSVTLQYITKSWELQSWCLGCCGLNTDHTAESLKEAFEEK
LEDWKLDIARMSGITTDNATNNKKAFEDYTWIPCFGHNLHLAVNKAIEINRVSAALSRLR
KTISAFTRSPKLSRQLAKKQKDLSSPDHKLIHDEPTRWNSSYDMVERFLEQQQVVCAVLA
EDRKKWYLMPKDSDITVLETVKAVLEPLSPFTDALSGEKHTTLSSVLPLLWKIFECLSHK
QSDSALAQEMKEKIHEYLKHRYDDLQLQFLLNTATYLDPRFKNSFVSLKGDDVKQSLLDE
VRKMGNAESASRVSGGESSQEVRPSKKSKNDLKHLLSSIQGEKKEKGEPTCSSQANLSAS
DELNGEFLVYSQMPEISAEDDPLSWWKTNMAMAKQSNSEAIVDSNSVKSSAKAGEYFGGL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggcggcgctgccgtggtgacggcacttgttgataagaaaggagggaaaagc
catgtgtggaaacatttcggattcgcggctgatgacgaggggaacatcatagatcctcaa
aaaccaatttgcaaacgatgtcatcgaagttttctctcaaaagcaggaaacacatcaaac
ctaataaaacacctcaaagaccgacacccggatctgatgaaagagttcaagcagatgcag
ggtgaggaagatcatgaaacaccccagcaaactttaaaacagccaacagttacagaagct
tttcagcggcagcagaaatatgacaaaaactcacctgaggcaagaaagctaaaccgagct
gttgctgaattcatatgtatggataaagtccccatttatactgttcaaaaatgtggattc
cagcagctgcttcatcacttcaacccaaaataccagcttccaagtcgaaactttttcatg
tacactgagattccacgcatctacaatgacaccagagacctcataatgcagcatctcgga
gagaaaccattttacagttgcacaactgatctttggacaagtagaacggctgacactttc
atgtctgtaactctgcagtacattactaaatcatgggaattgcaatcctggtgtcttgga
tgttgtggtctcaacactgatcacaccgctgaaagtttgaaggaggcctttgaagaaaaa
cttgaagactggaagttggacattgcaagaatgtcaggcatcacaacagacaatgccaca
aataacaaaaaagcctttgaggattacacctggattccttgttttggacacaatctccac
cttgctgtgaataaggcaatagaaataaacagggtgtccgcagcgctgtcaaggcttcga
aaaacaatttctgcgttcacaagatcaccaaaactttcacgccagctggccaaaaaacag
aaagatctgtcctctccagaccacaaactcattcatgatgaacccactcgctggaattct
tcatatgatatggtggaacgtttcttggagcagcagcaggttgtctgtgcagtcctggct
gaagacaggaaaaaatggtatctgatgccaaaagactcagacattacagttttagaaact
gttaaagccgttcttgagccactcagtccttttactgatgcacttagtggggaaaaacat
accaccctgtcctcagtcttgccattactctggaagatatttgagtgtcttagtcataaa
caaagtgactctgcattagcccaagagatgaaggaaaagatacacgagtatcttaagcat
cgctatgatgacctgcagctgcagtttcttttgaacactgcaacttaccttgatccaaga
tttaaaaacagctttgtttctcttaagggtgatgatgtgaagcaaagtctcctggatgag
gtgaggaaaatgggcaatgcagaaagtgcatctcgggtgtcgggaggagagtcaagtcaa
gaagtcaggccatcaaaaaaatccaaaaatgatctgaagcatctgctttcctccatacaa
ggggaaaagaaagaaaaaggagagccaacatgctcaagtcaagcaaatctttctgcaagt
gacgagttaaatggtgaattcttggtgtacagtcagatgcctgagatcagtgctgaggat
gatccactttcctggtggaaaacaaatatggcaatggcaaaacagtcaaactcagaggca
attgttgatagcaattcagtaaaatcctcagcaaaggctggagagtattttggaggcctg
taa
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