Pimephales promelas (fathead minnow): 120464728
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Entry
120464728 CDS
T08155
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00260
Glycine, serine and threonine metabolism
pprm00630
Glyoxylate and dicarboxylate metabolism
pprm00670
One carbon pool by folate
pprm01100
Metabolic pathways
pprm01200
Carbon metabolism
pprm01230
Biosynthesis of amino acids
pprm01240
Biosynthesis of cofactors
pprm04981
Folate transport and metabolism
Module
pprm_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120464728 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120464728 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120464728 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
120464728 (shmt2)
Enzymes [BR:
pprm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
120464728 (shmt2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Mab-21
Motif
Other DBs
NCBI-GeneID:
120464728
NCBI-ProteinID:
XP_039510175
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All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MLTLTLRQLIRPVVRCVPAVRCQHSAPAAWADDERQWTGQESLAQDDPQMWELLMKEKDR
QCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKRALEA
FDLDPSLWGVNVQPYSGSPANFAAYTAVLKPHDRIMGLDLPDGGHLTHGYMSDVKRISAT
SIYFESMPYKLNPDSGLIDYDQMELTARLFRPRLIIAGTSAYARLIDYSRIKKLCSELNA
YLLADMAHISGLVAGRAIPSPFEHADLVTSTTHKSLRGSRAGLIFYRKGVRSLDKKGKEV
MYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQATTPMFRQYIAQVLKNSKAMAAALLQ
KGFTLVSGGTDNHLVLVDLRPLGMDGARAERVLELVSITANKNTCPGDKSALTPGGLRLG
TPALTSRQFKESDFHQVVDFIDQGIKIALDVKTKTKKLADFKSFLLEDSETASRIADLRS
RVEAFARPFPMPGFHDH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgttaacactgactttaagacaactgatcaggccggtggtccggtgtgttcccgccgtc
agatgccagcactcagcgccggcggcgtgggccgatgacgagcggcagtggacgggtcag
gagagtctggctcaggacgacccgcagatgtgggagcttctgatgaaggagaaggacagg
cagtgccggggactcgagctcattgcctcagagaacttttgcagtcgagcggccctcgag
gctcagggttcgtgtctcaacaacaagtactctgaaggatacccggggaaaaggtattac
ggtggcgctgaggtggtggatcagatcgagctgctctgccagaagagggcgctggaggcg
ttcgatctcgacccgtcgctgtggggtgtaaacgttcagccgtactccggctctccggcc
aacttcgccgcttatacggccgtcctgaagcctcacgacaggatcatgggcctcgacctg
cccgacggaggacatctcactcacggatacatgtctgacgtcaagcggatctcggccact
tccatctacttcgagtcgatgccctacaaactcaaccctgattcgggtctgattgattat
gatcagatggaactgacggctcgactcttccgacccagactcatcatcgccggaaccagc
gcttacgctcgcctcatcgactacagccgcatcaagaagctgtgcagtgagctgaacgcg
tacctgctggcagacatggctcacatcagtggactggtggccgggagagccattccctcg
cccttcgaacacgccgacctcgtgacctcgaccactcacaaatccctgcgcggatccagg
gcggggcttatattctaccgtaagggcgtgcgctcgctggataagaagggtaaagaggtc
atgtacgacctggaggacaaggtcaacttctcagtgttcccttcgcttcagggcggccca
cacaaccatgccatcgctggcgtcgccgtggctctcagacaggccacgacgcccatgttt
cgccagtacatcgctcaggtcctgaagaactccaaggccatggccgccgcgctgctgcag
aagggcttcacactcgtctccggaggaaccgataatcatctggttctggtggatctgagg
cctctgggaatggacggagcgcgcgctgaacgagttctggaactggtgtccatcacggcc
aacaagaacacgtgtcccggagacaagagcgcgctcacgcccggcggccttcgactggga
acccctgcgctcacgtcacgccagttcaaggaatcagactttcatcaggttgtggatttc
atagatcagggcatcaagatcgctttggatgtgaagaccaagaccaagaaactggctgat
ttcaagagtttcctgctggaagactcagagacggcgtctcgtatcgctgatctgcgttca
cgcgtcgaggcgttcgcccgtccgttcccgatgcctggattccacgaccattaa
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