Pimephales promelas (fathead minnow): 120464735
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Entry
120464735 CDS
T08155
Symbol
dscamb
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120464735 (dscamb)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
DSCAM family
120464735 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
fn3_2
DUF6249
Motif
Other DBs
NCBI-GeneID:
120464735
NCBI-ProteinID:
XP_039510184
LinkDB
All DBs
Position
Unknown
AA seq
2020 aa
AA seq
DB search
MWILAFLFLQSILNVFGEDLRSSLYFVNASLQEVVFSSTTGALVPCPAAAVPPATLRWYL
ATGEEIYDVPGIRHVHPNGTLQIYGFLPSSFSNLINDNTYYCTAENPSGKIRSQDLHIKA
VFREPYTVRVADQRVMRGNTAVFKCIIPASVEDYVSVVSWEKDTVSLVSGSRYLITSTGA
LYILDVQSEDAVNIYRCTTRHRYTGETRQSNSARLLLSDPVDSAPVILDGFERREVMVGH
RVELPCKASGHPPPRYRWLRDNSPLESDSRYHQSVSGLLIEATRPSDAGSYVCEVWNSFG
NAKVVGRLVVKQPLKAVVSPRKVRGSVGSQVSLFCSVTGSDEYDISWYRNGEKIYQGINV
RITGINDENLVMEGMAKSDGGAYQCFARNGKMSTQDLVQVVLEDGTPKILSAFSEKVVSP
NEPISLVCHVKGTPLPTVTWTLDEDPVIKDSNHRMDRIINTEGHVLSYLNVSHTQVSDGG
VYRCTCNNSAGSVSYQARINVRGPASIRPMKNVTAIAGRDTYIHCRIIGYPYYSIKWYKD
SKLLPFNHRQRAFENNGTLKLSNVQNSDEGEYTCYVLVDPEKQIHRSVHVTVKVPPLIQH
SDSQSASIGQRVFIPCVVISGDLPMSITWHKDGRPINASLGVTIDNIDFTSSLRISNLSE
IHNGSYTCIARNEAAAVEHSIQLIVKVPPHFEVQPRDQDGIYGKSVILNCSAKGNPIPTI
VWNHSKGAGVPQFQPIALNSGSRIQLLEKGSLLIKHVLEEDAGFYLCKVSNDVGADISKS
MYLTVKIPAMITSYPNTTRAEQGHMTEMSCTAHGEKPIKVRWEKESHIINPDMSRYVVTV
KEVGDEVISTLQILHTVREDSGFFSCIAINSYGEDKGIIQLIVQDRPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDINYKNKSASWAASQMTKDVSPQLNQATIIELHPASTYNIR
MFAKNQIGESRPSNELTITTDEASPDGAPQEVQLEAISSQGIKVTWKPPLKHLQNGLIRS
YQVCYREFGTGGSPQYNTINVDTTGDTETLTLDNLKKYTQYEVRVQAANRAGMGPTSEEI
TITTLEDVPSRPPENVVTTATTPETISLSWSALPKEALNGMLLGYRVIYWANLPDGELGE
IRNITTIKPSLELERLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVKAAA
STSSVVFVSWLPPFKLNGIIRKYTVFCSNPYPTVISEFEAAPDVYFRRLTNLNQNWQYSI
WVVAVTAAGRGNTSEIITVEPQAKAPARILTFSGTVTTPWMRDIVLPCKAVGDPPPTIKW
LKGNNGTPAPVSIDGRRSAHSNGSFVIRTIKAEDSGYYRCVASNNWGSDEIMLNLQVQVP
PDQPRLTVTKTTTTSITLFWIPGDNGGSSIRGYILQYSEDNSEEWGSFSISPSERSYRLE
NLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKDHELFSSINSTRVELNLIGW
NNGGCPIDSFTLEYRPVDTMKWTMVKRDSLTKSHILYDLQEATWYELQMRVGNSAGTAEK
SVLFATLNVDGSTIAPLPKTVDPGKVNGPGNEGLKMMVTIICILVAISTVFIVLLVLRRR
RREQRLKRLRDAKSLAEMLMSKNARTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMETID
DRSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAG
PATRSRYASQWTLNRPHPPVSSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARS
SMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTDSLT
SSTPSESGICRFTASPPKPQDASRVMNMAVPKAHRPGGELVHLPPYLRMDFLLNRGAAPS
GREATGQTCMDPQKSRLAKRPALLAPTPSETPSSALSSSGPPSREAVQQWQPGTASTLPQ
REPGDLAQAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcatttctctttctccagagcatcctgaatgttttcggtgaagatcta
cgttccagcttatattttgtcaatgcatctctgcaagaggtagtgttctccagcaccaca
ggggcactggtgccgtgtcccgccgcggccgtgccccccgccacgctgcgctggtacctg
gccaccggggaggagatctacgatgtcccaggcatccgccatgtgcaccccaacggcacg
ctgcagatctacggattcctgccgtccagctttagtaacctaatcaatgacaatacatac
tactgcacagcggaaaacccatcagggaagatcaggagccaagatctacacattaaggcc
gtattccgggagccgtacacagtgcgtgtggccgatcagagagtcatgcgggggaatacg
gccgtcttcaagtgcattatcccggcctcagtagaggactacgtcagtgttgtatcatgg
gagaaagacacagtctcacttgtctcaggatcaagatatcttatcacatccacgggggcc
ttgtatattctggatgtgcagtcggaggacgcggtgaatatttatcgctgtaccacgcgg
caccgatacacaggggagaccagacagagcaacagtgcccgactgcttttatcagatcct
gtggactccgctccagtgattctggatgggtttgaacggagggaggttatggtgggacac
cgggtggagctcccgtgtaaagcgtccggtcaccccccgcccaggtatcgctggctgagg
gacaacagccccttagaatcagacagccgctaccaccagagtgtatcgggccttctcatc
gaggccacgcgacccagtgatgctggcagttatgtgtgtgaggtgtggaacagcttcgga
aacgccaaagtggtcggacggctggtggtcaaacagcctctgaaagcagtggtgagccca
cggaaggtgagaggcagcgtgggtagccaagtgtctctgttctgcagcgtgactggctct
gacgagtatgacatcagctggtacaggaacggtgagaagatctatcagggtataaacgta
cgtatcacgggcatcaacgacgagaacctggtgatggagggaatggccaagagcgatgga
ggagcgtatcagtgctttgctcgaaatggcaagatgtccacccaagacttagttcaggtc
gtcttggaagacgggacgccaaagatcctctcggccttcagcgagaaggtggtgagcccg
aacgagcccatctcgctggtgtgtcacgtgaaaggaacgccgctccccaccgtcacctgg
accctggacgaagaccccgtcatcaaagacagcaaccaccgcatggaccgcatcatcaac
accgagggccacgtgctcagctatctgaatgtgtcccacacacaggtcagcgatgggggc
gtctaccgctgcacctgcaacaactcggcgggatcggtctcctaccaggctcgaataaac
gtaagaggccctgccagtattcgaccaatgaaaaatgtcactgccattgctgggagggac
acctacattcactgtcgcattatcggttacccttattactctattaagtggtataaggat
tccaaactactccctttcaaccatcgccaacgtgcctttgagaacaacggcacactgaag
ctgtccaatgtgcaaaactcggacgagggagagtacacgtgctacgtgctggtggatcca
gagaaacaaattcacaggagtgttcatgtgacagtgaaagtgccccctctgatccaacac
tccgactctcagagcgcttccatcggtcagcgtgtcttcatcccctgtgtggtcatatcc
ggcgacctgcccatgtctataacctggcacaaagatggacgaccaattaatgccagcctg
ggtgtcaccatcgacaacatagacttcaccagctcattgcgcatttcaaacctgtcggag
attcacaacggcagttacacctgcatcgcccgcaacgaggcagcagccgtcgagcacagc
atacagctcatcgttaaagttccaccacattttgaggttcagccaagagaccaggacggc
atatatgggaagtcggtgatcctgaattgttcagccaagggaaacccaatccccactata
gtatggaaccactccaaaggtgctggcgtacctcagttccagcccatcgccttgaattcg
ggttcgcgtatccagctcctggagaagggctctctgctcattaaacacgtcctggaggaa
gatgctggattttatctgtgcaaggtcagcaatgacgtgggagccgatatcagcaagagc
atgtacctcaccgttaaaattcctgctatgatcacatcataccccaacaccacacgagcg
gagcagggtcacatgactgagatgagctgcactgctcacggtgaaaagcccatcaaggtt
cgctgggagaaggaatctcacatcatcaacccagacatgagccgctatgtggttacggtg
aaggaagtgggcgacgaggtcatatccaccctgcagatcttacacaccgtccgagaagat
tctggctttttctcttgcatcgctatcaactcttacggtgaagataaaggaatcattcag
ttgatagtgcaagatcgtcctgaccctcctgaggtcgagatcagagaagtgaaggaccga
accatcgcgcttcgctggacaatgggcttcgacggaaacagccctataacaggatatgac
atcaactataaaaacaaatccgcttcatgggccgcatctcaaatgaccaaagacgtctcc
cctcagctgaatcaggccaccatcattgaactccaccccgcctccacctacaacatacgc
atgtttgccaaaaaccagatcggagagagccgaccaagcaacgagctgaccatcaccaca
gatgaagcctcacctgatggcgctcctcaagaagtgcagctggaagcgatctcatcccaa
ggcatcaaagtcacgtggaagccccccctgaaacacttgcagaatggattgatccgaagt
taccaagtgtgttatcgggagtttgggacagggggcagtccccagtacaacaccatcaat
gtagacaccacgggggacaccgaaaccctcactctggataacctgaagaagtacacccag
tatgaggtgcgggtgcaagcggccaatcgggcaggaatgggtcccacctcagaggaaatc
accatcaccacgctagaggatgtgcccagtcgcccacctgagaacgttgtgacaacagcc
accactcccgagaccatctccctgtcctggtctgctctccccaaagaagcgctcaacggc
atgctgctgggataccgtgtcatctactgggccaatctacctgatggagaactgggagag
atcaggaacatcacaactatcaagccttcactagagttggaacggctggagaaatacacc
aactacagtatccaggtcctggccttcactcgagccggagatggcgttcgtagcgagcag
atctacacgcgcaccaaagaggatgttcctggccctccggctggagttaaggcagctgct
tccacaagctcggtggtgtttgtttcctggctgcctccattcaagctcaacgggatcatc
cggaaatacaccgtgttctgctccaacccttaccccacggtgatcagtgagtttgaggct
gcccctgatgtttacttccgtcgtttgaccaacctgaaccagaactggcagtacagcatc
tgggttgtggcggtcactgcggcgggtcgtgggaataccagcgagattatcaccgtggag
ccccaagctaaagcccctgctcgaatcctgacgttcagtggcacagtgaccaccccttgg
atgagggacattgtccttccatgcaaagcagtcggagaccctcctccaaccatcaagtgg
ctgaagggaaataatggtacacctgctccagtttcaatcgatggtcgtcgcagcgctcac
agcaatggcagctttgttattcgtaccatcaaagcagaggattctgggtactacagatgt
gttgccagcaataactggggttcagatgagatcatgctaaatcttcaggtccaagtacct
ccggaccaaccacgcctcacagtgaccaaaaccacgaccacctccatcacgctgttctgg
atccctggagacaatggagggagctccatcagaggctacattctgcagtactctgaggat
aacagtgaagagtggggcagtttctccatcagccccagtgagcggtcttaccgtcttgag
aatctgaagtgtggcacttggtacaaatttactctaactgcacaaaatgcagttggtcct
ggacgcatcagtgaaatcattgaggctaaaacccacgggaaagagccacagttcgccaaa
gaccatgagcttttctcaagtatcaactctacccgtgtggagctcaacctcattggctgg
aacaacggcggctgtccgatcgactccttcacattggaatatcggcccgtggacactatg
aaatggaccatggtaaagcgggattccctcaccaagagccacattctgtacgacctacag
gaggccacctggtacgagctccagatgagagtgggcaacagcgcaggaacagcagagaag
agtgtgcttttcgcaactttaaacgtggatggcagcacaattgctccattgccaaagact
gtggacccaggcaaggtgaacgggccgggcaatgaaggactaaagatgatggtcacaatc
atatgcattctggtggcaatctcgacggtcttcattgttcttctggtattgaggaggagg
agaagagagcagagactcaagagattacgagatgcaaagagcctagcagagatgctaatg
agtaaaaatgcacgtacaccagacaccgtgaacaaacagcagcagactctgaggatgcac
atcgatatcccacgtgctcagctcctcattgaggagagagacactatggagacaattgat
gaccgctccacagtgctattgacggataatgactttggagaaacatctaaacagaagtcc
tcgaccgtcacccatacagtacattaccagtctctatctcaggccactggaccgctagta
gacgtgtctgacgctagacctggtacaaaccccactgcccgccgcaccgctaaagcaggt
cccgccacacgcagtcgctacgccagccagtggaccctgaaccgaccacatccccccgtc
tcctcacacactctcactaccgactggaggctgcccacaccccgcgccacgggctcagtg
gacaaagagagcgacagctacagtgtcagtccctctcaggacacagaccgagctcgcagc
agtatggtgtctacagaaagcgcctcctccacgtacgaggaactagcccgtgcctacgaa
cacgccaagatggaggaacagctgcgacacgctaagttcacgatcacagaatgcttcatc
tcagacacatcctccgaacagatgacggccggcaccaatgactacacggacagcctgacg
tccagcacgccgtcagagtcaggcatctgcagattcacagcctccccgcctaaaccacag
gacgccagccgggtcatgaatatggccgtgcccaaagcacacagacccggaggtgagctg
gtccatctccccccttacctacgtatggacttccttttgaaccggggagcggccccttca
ggtcgggaggccacaggacagacttgtatggacccacagaagagccgattggcgaagcgg
ccagcattgctggcccccacaccctccgagaccccctcgtcagccctctcttcctccggg
ccccccagcagagaggcggtacagcagtggcagccgggaactgcctctacactgccacag
cgcgagccgggcgacctggcccaggctgccaaactcagcagctcccaggagtcgctgtta
gactccagaggacacctgaaacaaagcaacaacccctacgcaaagtcctacacacttgta
taa
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