Pimephales promelas (fathead minnow): 120464750
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Entry
120464750 CDS
T08155
Symbol
prdm1b
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120464750 (prdm1b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120464750 (prdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
zf-C2H2_11
Zf-C2H2_ZNF451_C
B129_C2H2-zf
zf-MYST
zf-Vps39_C
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
120464750
NCBI-ProteinID:
XP_039510202
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MKLEACLEDLSEWRELDFAMNCTYIVQDQACEPSFGLPKAMTSIPRNLTFQYSADNQVTG
VFSKEYIPQGTRFGPLQGVVYTKDNVPLHANRKYFWRIYSGGHLHHFIDGYDVQRSNWMR
FVNPARSGAEQNLVACQNGQEIFFYTLRPVEPEQELLVWYSPEFSQRLCGQPVQPDRLKP
KYMPDMDYQKQNVYYPKQASSPHKLRNEGEEEEVDEKIDVELIERDTPPDTPDEQVVDFS
KKIHRAASPQLVRSPHPNQKEMNMSTHLYPTLSPQDLSLHLQGLYGHHREGLISYPSLPS
PRPLQAPYPLLPQYNPHFSRLLLPPYSPPFPSMLPSKGSLRYNGFLGSDGLPYPSIPQPG
LLPVTLPYPSPVHGGLKERIPNTPPGAPATPELSPQQSFHKSLSECEEAINLSLASPRST
PPLSSSSPPTPGYKSLPYPLKKQNGKIKYECNVCLKTFGQLSNLKVHLRVHSGERPFQCN
LCKKSFTQLAHLQKHHLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCGV
KFTQYIHLKLHRRLHSSCERPHTCQTCTRGFLHGFSLHLHQRSGCCPNTRPEIPELVERF
DASHEAEALPENAGDAQVDTALEKWLARSLENGEGKEDVGFLKAFSASVPQGETIMGHHP
QERASVVHFNHRHSIKTEEE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggaagcgtgtctcgaggacttgagcgagtggagggaactggacttcgccatg
aactgcacatatattgtccaggaccaggcgtgcgagccgagctttgggctcccgaaggcc
atgacctccatcccacgaaacctcaccttccagtacagcgccgacaaccaggtgaccggt
gtgttcagtaaagagtacatccctcagggcacgagattcggacctcttcaaggggtcgtc
tacaccaaagacaatgtgccccttcatgccaaccggaagtacttttggaggatctacagt
ggtgggcacttacaccacttcatcgatggctacgacgtccagcgcagcaactggatgcgg
ttcgttaacccggcacgctcgggggccgaacagaacctggtggcctgtcagaacggccag
gagatcttcttctacacgctgcggcccgtggagcccgagcaggagctgctggtgtggtac
agccccgagttctcccagagactgtgtggccagccggtgcagcccgaccgcctcaagcca
aagtacatgcctgacatggactatcagaagcagaatgtctactaccctaaacaggcctca
agcccacacaaacttcgaaacgagggagaggaagaagaggtggacgagaagatcgacgtg
gagctcattgagagggacacgcctcctgacacaccagacgaacaggtcgtggacttcagc
aagaagatccacagagctgcttctccacagttggtgcgttctccacatcccaaccagaag
gagatgaacatgagcactcacctgtatcccaccctgtccccgcaagacctctcgctccac
ttacaaggcctttatggtcatcatcgagagggtttgatctcgtacccttccctgccctct
cctagacctctgcaagctccttatccacttctaccacagtacaatcctcatttttcccgt
ttgctgttgcccccgtactcccctcccttcccgtccatgttgccctcgaaagggagtctc
cggtacaacggattcctgggaagtgatggcttaccctacccttcaattccccaacctggt
ctgttaccagttacccttccctatccctccccggtccatggaggattgaaggaaagaatc
ccgaatactccccccggtgccccggccacccccgaactctcccctcagcaaagcttccac
aagtctctctctgaatgcgaagaagccattaacctcagcctggcttcacccaggagcaca
ccccccctgtcctcgtcttctccaccaacacccgggtacaaatctctcccatatccactc
aagaagcagaacggcaaaatcaagtatgaatgcaatgtctgcctcaagaccttcggtcaa
ctgtccaacctcaaagtgcacttgagggtccacagtggcgagagaccattccagtgcaac
ttgtgcaaaaagagtttcacccagctggcacacttacagaaacatcacctggtccacacg
ggagagaagccacacgaatgccaggtgtgccacaaacgcttcagcagcaccagcaacctt
aaaacacacttgcgtctgcactcgggagagaagccgtatcagtgtaagctgtgtggagtg
aagtttacccagtatatccacctcaaactccaccgtcggcttcacagctcctgcgagcga
ccgcacacctgccaaacctgcacccgaggcttcctccatggcttctccctacacctccac
cagcgctcgggatgctgtcccaacacccgtcccgagatccccgagctggtggagcgattc
gacgccagtcacgaggccgaggctcttccggagaacgccggagacgctcaggtcgacacc
gccttggagaaatggctggctaggagtctggaaaacggcgaggggaaggaagacgtggga
ttcctcaaggctttcagtgcttcagtacctcagggagaaaccatcatgggccaccatccc
caggagagagccagcgtggttcacttcaaccatcggcactccattaagactgaggaggag
tag
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