Pimephales promelas (fathead minnow): 120464830
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Entry
120464830 CDS
T08155
Symbol
cgnl1
Name
(RefSeq) cingulin-like protein 1
KO
K21110
cingulin-like protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120464830 (cgnl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_tail_1
CENP-Q
Filament
DUF1664
Motif
Other DBs
NCBI-GeneID:
120464830
NCBI-ProteinID:
XP_039510309
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MESYRVSGMPNHGLSQGYTQPSRTRGQSNGTYGLSIRVQGIDGHPYVVLNNQDRGPNPYV
DPQNNNGFMDSESPNNYDEYDFKEARKNLSEGPYVDFMSPKLHGGPHNGTDPKKQSSLLN
FQKHPEILKPYDPESNTLDSFGSLPVVETQNPYPESLPRANSPIVSQARSSSSVPEPSFP
DDRGLARPQIRPQTLPFSVQSRTGLTKDHVLAQPQVKPQIQAQPQVKPPFKTLVPYQTPP
QPSQRLPIPQASTVTSNPNDQTKASSRPPSSVSSTNSSLERSRREPDVLPLRRIDSSGPV
LQSSSPRNSSLGSTTPTKEDQLDQLYAETINRHENRRYIPFMPGTGRDIDTGSIPGVDEL
IKKFDSKETQQRRGRSGRRNRLNPEDRKRSRSVDSALPFSLEGDTDYLDEVSRNRGRSTE
HLLRPSLLLQKSAGVKTSPMSPTSSTGPRITLRNVTQVKSAPGSPQGTVSHSSAAILGFK
NPQTHHSVTPVENKNEEAKLSQNMKCLSSLKTGSISRPAVNSKTTSTEVDAQVTPDLLKG
QQELSQQTNEETAKQILFSYLKDGSNDNDDTTKRKVNLVFEKIQTLKSRAAGNVQGDNKA
PDLAAEARALQEQKAEQEKEIADLKKQLENECKKSSDLSETQLKAGAGMKDLRRELEQCQ
AECSRLRDKLSQTEADLRTTVEELFQVKMEKEQYQTEIRDLQDQLSEMHDELDGAKQSQT
DSTDKEAMMEDFMQLKLDLQDLLLAKEEQEELLRRRERELTALKGALKEEVATHDQEVDK
LREQYEKEIRKLQTAVEEAKQNNVTANKEKEEVEVAKKVSEGQAGRLSQEVERLRKRAHE
LENEVTKLNRIIDEAKLQESRLGERTGRLEKEKRQLEESLAEIREQEEEMTRANHALTTR
LEDVQRNLTKMTHEHHELQERLKEEKSQKEQFKNTKNEIEDERRLLDRTVEKLQREMNEI
VEASQSSTQELQEQIDMYKEKNRREMAELQKQLREGGLELEKSRLTAKTLQEELAHVQED
LRQCQKSRDEALQRVKDLEQKVFELEVETETKAHSNDKTRQVKVLEDRLSAVELELDEER
QSGDLLMERIDRGREQLEQMRNELMQERASRQDVECDKISLERQNKDLKSRIAYLEGSHK
PSKEGLVVQLENRIQELEERLEGEERDRANLQLANRRLERKVKEMMMQVDEEHHSLQDQK
DQLNLRLKALKRQMDEAEEEIDRLEHNKKKLQRDLEEQQEANEQLQSQLKTLRSEMRRKN
NSAPVLNPDDDDDDDDISTDGETYFSSSSGYKRSSSQDAFISNFSR
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttacagagttagcggcatgccaaaccatggactatcacaaggctatacgcag
ccttcccgcacaagaggccagagcaatggtacttacggcctcagtatcagagttcaaggc
atagatggacacccctatgtggtcctcaataaccaggatagaggtccaaacccctatgtg
gaccctcaaaacaataatggatttatggattctgaaagcccaaacaattatgacgaatat
gatttcaaagaagccaggaagaatctttctgaaggcccatatgtggattttatgtctccg
aagcttcatggaggtcctcacaatggaactgatcctaagaagcaatccagtcttttaaac
ttccagaagcatccggagattctcaagccgtatgatcctgagagcaatactctcgatagc
tttggaagtctacctgttgttgagactcaaaatccctacccagaatccctacccagagcc
aactccccaattgtgagccaagcccgatcctccagctcagtcccagaaccatctttccca
gatgacaggggactcgcccgacctcagattcgtccccagacactaccgttcagtgtccag
tctcgaacaggtctaaccaaagaccatgttctggcccagcctcaggtcaaaccccagatt
caagcgcaacctcaggtcaagccaccttttaaaactctagtgccctaccagactccgcct
caaccctcacaacgccttccaattcctcaggcgtctacagtaaccagtaacccaaatgac
cagaccaaggcctcttctagacctcccagctcagttagtagcaccaactccagtctggaa
cggagtcgacgtgaaccagatgtgttgcccttgcgccgtattgactccagtggcccggtg
ctacagtcttcctctccccgtaactcctctttgggctccaccacaccaacaaaagaagac
cagttggaccagctttatgcagaaactatcaaccggcatgagaaccggcgctacatccct
ttcatgcctggcacaggacgtgacattgatactggttccatcccaggtgtggatgagctc
atcaagaagtttgacagcaaagagactcaacaacgcaggggtcggtcagggcggaggaat
cgactaaacccggaagaccgcaagcgttcccgtagtgttgatagcgccttgccatttagt
cttgagggtgacactgactatttggatgaggttagcaggaatcgaggcagatctacagag
catcttcttcgcccgtctctgctcctgcagaaaagcgctggagtgaagacctccccgatg
tcgccaacttcctctactggacccaggataaccctaagaaatgtaacacaagtcaaaagt
gctccaggctctcctcaggggacagtctcccactcttcagctgctattttggggttcaag
aatccccagactcatcactctgtaacacctgtagagaacaaaaatgaagaggccaaacta
tcacagaatatgaagtgcctgtcaagtctgaaaacaggatcaatttctcgtcccgctgtc
aacagtaaaacaacaagcactgaagtggatgcccaggtgacacccgatcttctgaaaggt
caacaagagctttcacagcaaacaaatgaagagactgctaagcaaatattattcagttac
ctcaaagatgggagcaatgataacgatgacaccaccaagagaaaggtcaaccttgtgttt
gaaaaaatccaaaccttgaagtcacgggccgctggaaacgtgcaaggcgacaacaaagct
ccagaccttgcagccgaggctagagcccttcaggagcagaaagccgaacaggaaaaagaa
atcgctgatcttaagaaacagcttgagaatgaatgcaagaagagcagtgatttgagcgag
actcagctgaaggcgggagctggaatgaaagatttgaggagagagctggaacagtgtcaa
gccgaatgcagcagactccgggacaagcttagtcaaacagaggctgacctgcgcactaca
gtggaggaactcttccaggtaaaaatggaaaaagagcagtaccagactgagatccgagac
ctgcaggaccagctctcagagatgcacgatgagttggatggagccaagcaatctcaaaca
gacagtacagacaaagaggccatgatggaggacttcatgcaactgaaactagacctccag
gacctgcttcttgccaaagaagagcaggaggagctgctgaggcggcgtgagagggagctg
accgctcttaaaggagctctgaaagaggaggtggcaactcacgatcaggaggtggataaa
cttagggagcagtatgaaaaagagatccgtaagctacaaacagctgtggaggaagccaaa
cagaacaatgttacagccaataaggagaaggaggaagtggaggtagcaaagaaggtgtcc
gagggccaggcaggccgtctgtctcaggaggtggagagacttcgcaagagggcacatgag
ctggagaacgaagttaccaaactcaaccgcatcattgatgaagccaagctgcaggagagc
aggctgggggagcgaactggccgtctggagaaagaaaaaaggcagttggaggagtctctc
gctgagatcagggaacaggaagaggaaatgacccgtgcaaatcatgcgcttaccactcgc
ctagaggatgtgcagagaaacttgaccaagatgactcacgagcaccatgagttgcaagag
cgactaaaggaggagaagagtcagaaagagcagtttaaaaacaccaagaatgagattgaa
gatgagaggaggctgctggaccgaactgtggagaaacttcagcgggagatgaatgagata
gtggaggcgtctcagagctcaactcaggagctgcaggagcagatagacatgtataaggag
aagaaccggagggagatggcagagctgcagaaacagctgagagagggaggactggagctg
gagaaatcccgtcttaccgccaagactcttcaagaggagctggctcatgtgcaggaggat
ctgcgtcagtgtcagaaaagcagagatgaagcgctgcagagagtgaaggacctggagcag
aaggtttttgaacttgaggtcgagaccgagaccaaagcacactcgaacgacaaaaccaga
caagtcaaagtcttggaggaccgtctgtctgcggtagagcttgagctggacgaggagaga
cagagcggagacttgctgatggagagaatagacagaggaagagaacagttggagcagatg
aggaatgagctgatgcaggagagagccagcagacaggatgtggagtgtgacaaaatctcc
ctggagagacagaataaggatctgaagagcaggattgcttatctggagggatctcacaag
cctagtaaagagggattggtggtccaactggagaaccgcatccaggaacttgaggaaaga
ctggaaggagaggagagggatcgagctaacctgcagctggcgaatcgtcggcttgagcgt
aaagtgaaggagatgatgatgcaagtagatgaagagcatcattcactgcaggatcagaaa
gatcagttgaacttgcgtctgaaggctctgaagaggcagatggatgaggcggaggaggag
atcgaccgcctggaacacaacaagaagaaactgcagagagacctggaggagcagcaggaa
gccaacgaacaactccagagtcagctcaaaacactgcgcagtgagatgagacgcaagaac
aactctgcaccagtcctgaaccccgatgatgatgatgacgacgatgatatcagcactgat
ggcgagacctacttcagctcttcatctggctacaagcgctccagcagccaggatgccttc
atctccaatttctctcggtga
DBGET
integrated database retrieval system