Pimephales promelas (fathead minnow): 120464835
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Entry
120464835 CDS
T08155
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120464835 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120464835 (lrrc4cb)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
NGL family
120464835 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
Ig_3
LRR_14
ig
V-set
LRR_9
Ig_2
LRRNT
LRR_RPS2
LRRCT
DUF7617
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
120464835
NCBI-ProteinID:
XP_039510313
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MLYKMTSYHQRQMLRGPRWKGAWFDPLFLLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLKDVPDGISTNTRYLNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGA
FNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDL
GELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPNIQPLIRLDELEMSGNQLTVIQPSSF
KGLVHLQKLWMMHAQVQFIERNSLDDLHSLRELNLAHNNLSFLPHDLFTPLHHLQRVHLH
HNPWNCNCDILWLSWWLRETVPTNTSCCARCNSPPSLKGRYIGELDQSYFQCYAPVIVEP
PADLNLTEGMAAELKCRTNSVTSVSWLTPDGSVITHGVLKMRISVQNDGTLNFTNVTVQD
TGTYTCIVSNMQGNISASAVLNVTSVDNSGFSYFTTVTVETIETPIDGESRTPVQPSFGW
ASSSTTRGTPIATERAYTIPVTDIDIDGALNGLEEVMKTTKIIIGCFVAITLMAAVMLII
FYKMRKQHHQQDHDGPTRTIEIINVHEELTRVPGMESHLTLPPLEHEHYNHYNSYKTAYN
HVSALSSLHSSVHEPLLIQASSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacaagatgacctcttaccatcagcgccagatgttgagaggtcctagatggaaa
ggggcttggtttgaccccttgtttctcctgcttttagccctacagttgcttgttgtcgcc
ggattggtgcgagcccagacctgtccatctgtatgttcctgcagtaatcaatttagtaag
gtcatctgcacacgcagagggctaaaggatgtccctgatggcatctccacaaatacacgg
tatctaaaccttcaggacaatcaaatccaagtcatcaaagtggacagtttcaagcatcta
cgacaccttgagattcttcagcttagcagaaaccacatccgcaacatcgagattggcgcc
ttcaatggcctaaccagccttaacactctggagctttttgacaatcgcctcacgaccatc
ccaaatggcgcctttgagtatctatcaaaactgaaagagctgtggcttaggaataaccct
attgagagcataccgtctgatgccttcagtcgcctgccctccctgcggcggttggacttg
ggagagctgaagcgtctctcctacatctcgagtggagcatttcagggcttgagcaacctt
cgctacctgaatctgggcatgtgtaacctcaaagaggtccccaacattcagcccttgatt
cgcctggatgagctggagatgtccgggaaccagctcaccgtcatccaacccagttctttt
aagggtcttgtccatcttcaaaagctgtggatgatgcacgcccaagtccagtttatagag
cggaactccttggatgacctgcactctttgcgagagctcaacctggctcacaacaacctt
tcttttttgccccatgatctcttcacgcctttgcaccacttgcaacgagtgcatttgcat
cataatccctggaactgtaactgtgatattctttggctgagctggtggctaagagagacc
gtaccaacgaacaccagctgctgcgcacgctgcaattcccctcccagcctcaaaggacgc
tacatcggtgagctggaccagagctactttcagtgctacgcccccgttatcgtcgaacca
cctgctgacctcaatttgactgagggaatggcggcagagctcaaatgtcggacaaattca
gtgacctcggtcagctggctaacgccagatggctccgtcataacacatggggtgctcaaa
atgcgcatttctgtccaaaacgacggaacgctaaacttcaccaacgtcaccgtccaggac
acaggaacatacacttgcatcgtaagcaacatgcaaggcaacatttcagcctctgctgtc
ctcaacgtgacatccgttgacaacagtggctttagttacttcactacagtcaccgtagag
acaatcgaaacccctatcgatggggagagtaggacgccggttcagccttcatttggctgg
gcatcctcctcgaccacaaggggaacacccattgccaccgagagagcgtatactattcct
gtgactgacatagacattgatggcgctctcaatggtttggaggaggtaatgaaaaccacc
aagattattattggctgctttgtggccatcacgctcatggctgccgtcatgcttataata
ttctacaagatgcgcaagcagcaccaccagcaggatcatgatgggccgacccgcaccatt
gagatcatcaacgtccacgaggagctgacgagggttccgggcatggagagtcacctgact
cttccgcccttagagcatgagcattacaaccactataactcctacaaaactgcttataac
catgtgtctgctcttagctcgctgcatagttcagtgcatgaacctttactgatccaagcc
agctcaaaggataatgtacaggagacacaaatttga
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