Pimephales promelas (fathead minnow): 120464853
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Entry
120464853 CDS
T08155
Name
(RefSeq) matrin-3-like isoform X1
KO
K13213
matrin 3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120464853
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120464853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
120464853
NCBI-ProteinID:
XP_039510335
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MSQKRTGSNAQKGFAVGRGLLAGSETLNFSMGETHSDPYSSSSRSRSRSGLVGGEGKDHD
SPLYRRAGSNINTVQLFASLGLSSTDLDVLAQVPEENLCMETLPHLLMLLKNRKMEASWG
DIPGGRLDLSSGQAQSRSQGDFGYSSMQETSGRGYDMLDYTSGSGRDGQYSELSCDSYRN
HGMSASSPSDDMFMQRRMGSPSQRKVQDFLGVMPLMFPHLCSLCDFEVLSVMEWTQHTTG
IRHSENQKLLLQMYPDWDPQMPSNRTSTSLSLDTKSRSDRLLGADSIGGGLQRTGMSSSW
GSESSLGMTSKMTSYSTAPKIKSRVVVLKYERKPKSTNSLFDLAKPFGTISKHLVLKNVN
KAFLELQTHEEALAMANYYKRKPAILHGKEMQVYLSKELIGIKKSERPVRETRTREKKDV
SQVVFFYHLPRESDKKMELLKIARRFGTVEKHLFVDKGAYVQMGNSKDAEMLVKYYTVNP
LTISGRSVRLNICTKYKTLTDPPGKDDQGGEEPARKRSGSSSATSRTADKHSSKNRRSST
SKAKERSDKKEEEPKPEEVEALGDGAGAEADVMEACDEDQDRCDEDPSVDDVDLSCDPEQ
TSEQAPDIDDANKEDETSDETTENQKDSGEKQEETPLEEPTTSEAEQENTDELPKDLEEQ
NGDQTEDEGAEEDNEEQEGQTETDFPENMDEFVTLDELVEEENTKRKDSKSKAEYTSGSS
KDSGGYRVINVIGFKRGHDYKDEILALAKPFGKVVRHLILDVRPEAFLQFSKEKEAKAMV
SFYSRNALPSVCGRPVRVYHSHTYTTIQSGKVIYVGNIPPFKGSDALLLKIAEPFGKIRR
YYMNRLRNECFIEMDRGEDAEKMAETYKEKRPKFEGKRLVVYVSRKFKTLKCGKRPPSPE
AEDKQTLKRERSEDDEAQRNSSGKSKDKKEEEPSVKKIKVDEPVADKAKEMESHEEKESQ
NVSEEITPEEKKESEEKQCKDTSELQNMETKPEAEDEETVASEKSVKTEEKNHYNSTI
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaaacggactggttctaatgctcagaaaggctttgctgttggccgtgggctt
ttggctggctctgagactttgaactttagtatgggtgagacacactcggacccctacagc
tcgtcgtcccggtcccgatcccggtctggtctggttggaggggagggaaaagaccatgac
tctccgctgtaccgccgagcgggcagcaacatcaataccgttcaactgttcgccagccta
ggtctgtcatcgactgatctggatgtactggcacaggttccagaggagaacttatgcatg
gagaccttgccccatcttctcatgctgcttaagaaccgcaagatggaagccagctggggt
gacattccgggcggacgattggacctttccagtgggcaggctcaaagccgctcacaaggt
gacttcggttattcttccatgcaagagacatctggtcgagggtacgacatgttagattac
acgagtggtagcggcagagacggccaatattctgagctttcctgtgactcctaccgcaac
catggcatgtcagcgtcatcgccatctgacgacatgttcatgcagagaagaatgggctcc
ccgtctcagagaaaagtgcaggatttcttgggagtcatgcccctcatgtttccccatttg
tgctctctttgtgattttgaagtgctctctgtcatggaatggactcaacacacgactggg
attcgtcactccgaaaaccaaaaactccttttgcaaatgtacccggactgggatcctcaa
atgccctctaatcgcacgtcgacatccctttccttggacacaaagagtcgttcggataga
ttgctgggagcagattcaattggtggtggtctacagagaacagggatgagctccagctgg
gggtctgagtccagtctgggaatgacaagtaaaatgacatcatattcaacggcacccaag
ataaaaagtagggtggtcgtgttgaaatacgaaaggaaaccgaagtcaacaaacagcctg
tttgacctggcaaaaccctttggcaccatcagtaagcatctagtactgaagaacgtgaac
aaggctttcctggagctgcagactcatgaggaggctttggctatggctaattattacaag
cgaaaaccagccattttgcatgggaaagagatgcaagtttatttgtcaaaggaactgatt
ggaattaagaaaagtgaaaggccggtcagagaaactagaaccagagagaagaaagatgtc
agccaggtggtgtttttctatcatttgccacgggaaagtgacaagaaaatggagctcctc
aaaatagctcgtcgatttggcactgttgagaaacatttgtttgtagataaaggggcatat
gttcaaatgggcaattctaaggatgcagagatgttggtgaagtactacactgtcaatcct
ttgactatcagtggaagatctgttcgactgaacatctgcacaaagtataagactctaacg
gacccaccaggaaaggatgaccaaggaggagaagaaccagcccgtaagagaagcggtagc
agcagtgccaccagcagaactgctgataaacattcatcaaagaatcgaaggtcctctact
tccaaagccaaagagcgctctgataaaaaagaagaggaaccaaagcctgaggaagtagag
gccctgggagatggggcaggagctgaagctgatgttatggaagcttgtgacgaagaccaa
gacaggtgtgatgaagatccctctgtagatgatgtcgacctatcatgtgatccagagcaa
accagtgaacaagcaccagatattgatgacgccaacaaagaggatgagaccagcgatgag
accacagaaaaccaaaaagactctggtgaaaaacaggaagagactccactggaggaacct
acaacatctgaggctgagcaggagaacacagatgagcttcctaaagaccttgaggaacag
aatggtgatcaaactgaagatgagggtgctgaagaggacaacgaagagcaggagggtcaa
actgaaactgactttcctgagaacatggatgagtttgttactcttgatgagctagtggag
gaggagaacactaagagaaaagactcaaagtccaaagctgaatacacatcaggaagctcc
aaggatagtgggggatatagagttataaatgtcattggatttaaacgtggccacgattat
aaagatgaaatccttgctcttgccaagccatttggtaaagtggtccggcacctgatctta
gacgtgaggcctgaggccttcctgcagttctccaaagaaaaagaggcaaaagcaatggtt
agcttctactccaggaatgccttaccatctgtgtgtggaagacctgtgagagtttatcat
tcacacacctatacaaccatccagagtggaaaagtcatctacgttggtaatattccaccc
ttcaaaggctcagatgcattacttctaaaaatcgctgaaccatttggaaaaatcagaaga
tattatatgaatcgattacgcaatgagtgcttcattgagatggatagaggggaagatgct
gagaaaatggcagagacctacaaggaaaagcgacctaaatttgaaggcaaacgactggtt
gtctacgtgagcaggaaatttaagacgctgaaatgtggaaaaagacctccaagcccagag
gccgaggataaacagacactcaagagagaacgctccgaagatgatgaggctcagaggaac
tcatctggaaaaagtaaagacaaaaaagaggaagaaccttctgtcaagaagatcaaagtg
gatgagcctgtcgctgataaagctaaggagatggagagtcatgaagagaaggaaagccaa
aatgtttcagaagaaatcactcctgaggagaagaaagagtcagaggagaaacaatgcaaa
gacacatcagagctccaaaatatggagactaaacctgaggctgaagatgaagaaactgtt
gcgtcagagaagagtgtgaagactgaggaaaaaaaccattacaacagcaccatctga
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