Pimephales promelas (fathead minnow): 120464882
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Entry
120464882 CDS
T08155
Name
(RefSeq) matrin-3-like isoform X1
KO
K13213
matrin 3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120464882
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120464882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
120464882
NCBI-ProteinID:
XP_039510379
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MSQKRTGSNAQKGFAVGRGLLAGSETLNFSMGETHSDPYSSSSRARSRSGLVGGEGKDHD
SPLYRRAGSNINTVQLFASLGLSSTDLDVLAQVPEENLCMETLPHLLMLLKNRKMEASWG
DIPGGRLDLSSGQAQSRSQGDFGYSSMQETSGRGYDMLDYTSGSGRDGQYSELSCDSYRN
LGMSASSPSDDMFMQRRMGSPSQRKVQDFLGVMPLMFPHLCSLCDFEVLSVMEWTQHTTG
IRHSENQKLLLQMYPDWDPQMPSNRTSTSLSLDTKSRSDRLLGADSIGGGLQRTGMSSSW
GSESSLGMTSKMTSYSTAPKIKSRVVVLKYERKPKSTNSLFDLAKPFGTISKHLVLKNVN
KAFLELQTHEEALAMANYYKRKPAILHGKEMQVYLSKELIGIKKSERPVRETRTREKKDV
SQVVFFYHLPRESDKKMELLKIARRFGTVEKHLFVDKGAYVQMGNSKDAEMLVKYYTVNP
LTISGRSIRLNICTKYKTLTDPPGKDDHGREEPARKRSGSSSATSRTADKHSSKNRRSST
SKAKERSDKKEEEPKPKEVEALGDGEGAEDEVMEACDEDQDRCDEDPSADDVDLSCDPEQ
TSEQAPDIDDANKEDETSDETTENQKDSGEKQEETPLEEPTISEAEQENTDELPKDLEEQ
NGDQTEDEGAEEDNEEQEGQTETDFPENMDEFVTLDELVEEENTKRKDSKSKAEYTSGSS
KDSGGYRVINVIGFKRGHDYKDEILALAKPFGKVVRHLILDVRPEAFLQFSKEKEAKAMV
SFYSRNALPSVCGRPVRVYHSHTYTTIQSGKVIYVGNIPPFKGSDALLLKIAEPFGKIRR
YYMNRLRNECFIEMDRGEDAEKMAETYKEKRPKFEGKRLVVYVSRKFKTLKCGKRPPSPE
AEDKQTLKRERSEDDEAQRNSSGKSKDKKEEEPSVKKIKVDEPVADKAKEMESHEEKESQ
NVSEEITPEEKKESEEKQCEDASELQNMETEPEAEDEETVASEKSVKTEEKTITTAPSEI
KPETSHSTLEPYDPNVPVGVEFVKMGYYCRICFLFYSNEDTAKKIHCSSQAHYDKLKKYL
EKEKAKAQSNGTKK
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaaacggactggttctaatgctcagaaaggctttgctgttggccgtgggctt
ttggctggctctgagactttgaactttagtatgggtgagacacactcggacccctacagc
tcgtcgtcccgggcccgatcccggtctggtctggttggaggggagggaaaagaccatgac
tctccgctgtaccgccgagcgggcagcaacatcaataccgttcaactgttcgccagccta
ggtctgtcatcgactgatctggatgtactggcacaggttccagaggagaacttatgcatg
gagaccttgccccatcttctcatgctgcttaagaaccgcaagatggaagccagctggggt
gacattccgggcggacgattggacctttccagtgggcaggctcaaagccgctcacaaggt
gacttcggttattcttccatgcaagagacatctggtcgagggtacgacatgttagattac
acgagcggtagcggcagagacggccaatattctgagctttcctgtgactcctaccgcaac
cttggcatgtcagcgtcatcgccatctgacgacatgttcatgcagagaagaatgggttcc
ccgtctcagagaaaagtgcaggatttcttgggagtcatgcccctcatgtttccccatttg
tgctctctttgtgattttgaagtgctctctgtcatggaatggactcaacacacgactggg
attcgtcactccgaaaaccaaaaactccttctgcaaatgtacccggactgggatcctcaa
atgccctctaatcgcacgtcgacatccctttccttggacacaaagagtcgttcggataga
ttgctgggagcagattcaattggtggtggtctacagagaacagggatgagctccagctgg
gggtctgagtccagtctgggaatgacaagtaaaatgacatcatattcaacggcacccaag
ataaaaagtagggtggtcgtgttgaaatacgaaaggaaaccgaagtcaacaaacagcctg
tttgacctggcaaaaccctttggcaccatcagtaagcatctagtactgaagaacgtgaac
aaggctttcctggagctgcaaactcatgaagaggctttggctatggctaattattacaag
cgaaaaccagccattttgcatgggaaagagatgcaagtttatttgtcaaaggaactgatt
ggaattaagaaaagtgaaaggccggtcagagaaactagaaccagagagaagaaagatgtc
agccaggtggtgtttttctatcatttgccacgggaaagtgacaagaaaatggagctcctc
aaaatagctcgtcgatttggcactgttgagaaacatttgtttgtagataaaggggcatat
gttcaaatgggcaattctaaggatgcagagatgttggtgaagtactacactgtcaatcct
ttgactatcagtggaagatccattcgactgaacatctgcacaaagtataagactctaacg
gacccaccaggaaaggatgaccatggaagggaagaaccagcccgtaagagaagcggtagc
agcagtgccaccagcagaactgctgataaacattcatcaaagaatcgaaggtcctctact
tccaaagccaaagagcgctctgataaaaaagaagaggaaccaaagcctaaggaagtagag
gccctaggagatggggaaggagctgaagatgaagttatggaagcttgtgacgaagaccaa
gacaggtgtgatgaagatccctctgcagatgatgtcgacctatcatgtgatccagagcaa
accagtgaacaagcaccagatattgatgacgccaacaaagaggatgagaccagcgatgag
accacagaaaaccaaaaagactctggtgaaaaacaggaagagactccactggaggaacct
acgatatctgaggctgagcaggagaacacagatgagcttcctaaagaccttgaggaacag
aatggtgatcaaactgaagatgagggtgctgaagaggacaacgaagagcaggagggtcaa
actgaaactgactttcctgagaacatggatgagtttgttactcttgatgagctagtggag
gaggagaacactaagagaaaagactcaaagtccaaagctgaatacacatcaggaagctcc
aaggatagtgggggatatagagttataaatgtcattggatttaaacgtggccacgattat
aaagatgaaatccttgctcttgccaagccatttggtaaagtggtccggcacctgatctta
gacgtgaggcctgaggcctttcttcagttctccaaagaaaaagaggcaaaagcaatggtt
agcttctactccaggaatgccttaccatctgtgtgtggaagacctgtgagagtttatcat
tcacacacctatacaaccatccagagtggaaaagtcatctacgttggtaatattccaccc
ttcaaaggctcagatgcattacttctaaaaatcgctgaaccatttggaaaaatcagaaga
tattatatgaatcgattacgcaatgagtgcttcattgagatggatagaggggaagatgct
gagaaaatggcagagacctacaaggaaaagcgacctaaatttgaaggcaaacgactggtt
gtctacgtgagcaggaaatttaagacgctgaaatgtggaaaaagacctccaagcccagag
gccgaggataaacagacactcaagagagaacgctccgaagatgatgaggctcagaggaac
tcatctggaaaaagtaaagacaaaaaagaggaagaaccttctgtcaagaagatcaaagtg
gatgagcctgtcgctgataaagctaaagagatggagagtcatgaagaaaaggaaagccaa
aatgtttcagaagaaatcactcctgaggagaagaaagagtcagaggagaaacaatgcgaa
gacgcatcagagctccaaaatatggagactgaacctgaggctgaagatgaagaaactgtt
gcgtcagagaagagtgtgaagactgaggaaaaaaccattacaacagcaccatctgaaata
aagcctgaaactagccattctaccctagagccatatgatcctaatgtcccagtgggtgtg
gagtttgtgaagatggggtactactgcagaatctgcttcctgttttactctaatgaggac
actgctaagaaaattcactgcagtagccaagcacactacgataaacttaagaaatatttg
gaaaaggagaaagccaaagcacagagtaacgggacgaagaaatga
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integrated database retrieval system
