Pimephales promelas (fathead minnow): 120465143
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Entry
120465143 CDS
T08155
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120465143
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120465143
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120465143
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120465143
Ubiquitin system [BR:
pprm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120465143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Motif
Other DBs
NCBI-GeneID:
120465143
NCBI-ProteinID:
XP_039510710
LinkDB
All DBs
Position
Unknown
AA seq
2536 aa
AA seq
DB search
MTATTRGSPVGGNESQSQAPDGQTQTQMLSPNSSDETSPISPPEDVVQAEAPLTQEEEEP
AFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVKCEACQRFFRDGLT
VSFTKILTDEAVSGWKFEIHRCIISNTHRLMELCVAKLAQDWFPLLELLSMATNPHCKFH
IYNGTRPSESVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDRFMSAQ
ALNVQIIAALIKPFGQCYEFLTLHTVKKFFWPVIEMVPQFLENLTDEELKKEAKNEAKND
ALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSV
SYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFVIKEKT
LTLQDLDSIWAAQAGKHEAIVKNMHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQRE
KLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSCSQDRD
TQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRHDLINQ
LQHNHALVTLVAENLSAYMETMRQFSKESPGFDPQTVRVGSRYSHVQEVQERLNFLRFLL
KDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVL
QLDPTLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQGSDDI
ATRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSINCARQ
EAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVDDLDIW
SHTNDTIGSVRRCVLARIKANSTHTKVELFIGGEIVDPADDRRLIGQLNLKDKTLITAKL
TQVSANMPSSPDSSSDSSTGSPGTHANHFSDGPNPEVESCLPGVIMSLHLRYISFLWQIA
DLGCTLNTPLLRDGARVLMKLMPPDTTTVENLRATCLDHAKLGENSLSPTLDSRFFGPSA
SQVLYLTEVVYALLMPASGTLGDDACDFQYNFLKSGGLPLVLGMLTRNNFLPNADMETRR
GSYLNALKISKLMLTAIGFGHVKAVAEACQPVVEGTNPASPINQATHDQALVLQNALQNI
PNPGSECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQKIVWASGCGMVHLVFSSN
DDISQIYQKTNAGNEPDAEDEQVCCEALEVMTLCFALLPTALDTLSKEKAWQTFIIDLLL
HCQSKAVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKERAKRAGDYFTLLRH
LLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKATGETGVEDTILEGHLGVTKELLAFQ
TPEKKFHIGCERDGANLIKELIDDFIFPASNVYLQYVKSGEFPAEQAIPVCTSPASISAG
FELLVALAVGCVRNLKQIADTLTDMYYLGCEALTEWEYLPPVGPRPNKGFVGLKNAGATC
YMNSVIQQLYMIPHIRNGLLAIEGTGSDIDDDTSGDEKQDNEAEDRKEYNIGVLRHLQVI
FGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPSML
SRILGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYH
CEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVA
GVAKLEGDEVSPESQVIPENPPANPDASSRYRLVGVLVHSGQASGGHYYSYIVQRHGSDG
DGLKDRWYKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYI
LFYERMDATGGDDELLKYITELTLTSRPNQPKMPSAIEASVRKQNVQFMHSRMQFSLEYF
QFMKKLLTCNSVYLNPPPGQDHLLPEAEEIAMISVQLAARFLFSTGFHSKKVVRGPASDW
YDALCLLLRHSKSVRSWLAHSVLFSFPTRFSEFLLECPSAEVRGAFAKLIVFIAHFSLQD
GPCPAPVTAPSTPTQACDPATLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGL
AEKTQLLKLSVPATFMLVALDEGPGPPIKYQYAELGKLYAVVSQLLRCCDVSSRMQSSIN
GNPPLPNPYGDPGLTAPIMPLQPPVAETLFVRTSYVKKIIEDCSNSEETVKLLRFCCWEN
PQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLF
DTIQRSKNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRP
YTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEVSAQSLKPPRTPL
EPDDQEAPDEHDSTPPEDTALYPHSPATPSQYQQVNTLPHGQPYTGPAAQHMNNPQRASQ
ESWDGSDEVPPTQSKE
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacccgcgggtctcctgtggggggcaacgagagccagagccaggcgccc
gacggccagacccagacccagatgctgtcgccgaactcctccgatgagacgtcccccatc
agtccacctgaggacgtggttcaggcagaagctccgctcacacaggaagaggaggagcct
gccttcccacacacagacctggccaagctggacgacatgatcaaccggccgcgctgggtg
gttccggttctgcccaaaggagagctggaggttctgctggaggctgcgatcgagctcagc
aaaaaagggctggatgtgaagtgtgaggcctgtcagaggttcttccgcgacggtctgacc
gtctccttcaccaagatcctgacggacgaggccgtgagcggctggaagtttgaaatccac
aggtgcatcatcagcaacacacaccggctgatggagctctgcgtggccaagctggcccag
gattggttccctctgctcgagctgctctccatggccaccaacccgcactgcaagttccac
atctacaacggcacacggccgtccgagagcgtccccgcaggagcgcagctggccgacgac
gagctgttcgcccggccgcccgacccgcgctctcccaagggctggctggtggacctcatc
aataagtttggcacattgaacgggttccagattcttcacgatcgcttcatgagcgctcag
gctctcaacgtgcagatcatcgccgctctcatcaaaccgttcggccaatgttacgagttc
ttgactctgcacacggtgaagaagttcttctggcccgtgatcgagatggtcccgcagttt
ctggagaacctcacagacgaggagctgaagaaagaggccaagaacgaggccaagaacgac
gctctgtccatgatcatcaagtccctgaagaacctggcgtccagagttcctggtcaggag
gaaaccgtcaagaacttggaaatcttccgcttgaagatgatccttcggttgctgcagatc
tcctcgtttaatgggaaaatgaacgcgctgaacgaagtgaacaaggtgatctcgagcgtg
tcgtattacacgcaccggcacgggaaccctgaggaagaggagtggctgacagcggagcgc
atggccgagtggattcagcagaaccacattctgtccatcgtgctgcgagacagcctccac
cagccgcagtacgtggagaagctggagaagatcctgcgcttcgtcattaaggagaaaact
ctgaccctgcaggacctggacagcatctgggcagctcaggctgggaaacatgaagcgatc
gtgaagaacatgcatgatctgctggccaagctggcgtgggacttctccccggagcagctg
gaccacctgttcgactgcttcaaggcgagctggacgaacgcgagtaagaagcagcgggag
aagctgctggagctgatccgccggctggccgaggacgataaggacggggtgatggctcat
aaagtgctgaacctgctgtggaacctggcgcacagcgacgacgtgcccgtggacatcatg
gaccaggccctgagcgcacacatcaagatcctggactacagctgctctcaggaccgggac
acgcagaagatgcagtggatcgaccgcttcatcgaggagcttcgcaccaacgacaagtgg
gtcattccggctctgaagcagatccgcgagatctgtagcctgtttggagaagctcctcag
aacctcagtcagacgcagaggagtccacatgtgttctaccgccacgatctgatcaaccag
cttcagcacaatcacgcgctcgtcacgctggtggccgagaacctgtcggcgtacatggag
accatgaggcagttctccaaagagtctccaggattcgatcctcagacggttcgggtgggc
agccgctacagccacgtacaggaagtgcaagagagactcaatttcctgcggttcctgctg
aaggacggccagctgtggctctgtgctcctcaggccaagcagatctggaagtgtctggcg
gagaacgccgtgttcctgtgcgatcgcgaggcctgctttaagtggtactccaaactcatg
ggtgacgagccggatctggaccccgatatcaacaaggacttcttcgagaacaacgtgctg
caactggaccccacgctgctgacggagaacggcatgaagtgcttcgagcgcttcttcaag
gccgtgaactgcagagaggggaagctggtggccaaacgccgggcctacatgatggacgac
ctcgagctgatcgggctcgactacctgtggagggtcgtgattcaaggcagtgatgacatc
gccacacgggccatagacctgctgaaagagatatacaccaacctcggacccaaactacaa
gtgaatcaggtggagatccatgaggacttcatccagtcgtgcttcgaccggctcaaggcg
tcgtacgacacgctgtgtgttctggacggagacaaggacagcatcaactgtgccagacag
gaagccatacgcatggtgcgggtcctcacggtgctcaaagagtacatcaacgagtgtgac
agcgactaccatgaggagaggaccatcctgcccatgtccagggccttccgtgggaagcac
atcacgctggtggtgcggtttcccaatcaggggcgtcaggtggacgacctggacatctgg
tctcacaccaacgacaccatcggctccgtgcgccgctgcgttctcgcccgcatcaaagcc
aacagcacacacaccaaagtggagctgttcattggaggagagatcgtggaccctgctgac
gaccgccggctgattggacagctgaacctcaaggataaaacgctcatcacggcgaagctc
acgcaggtcagcgccaacatgccctccagccccgacagctcgtccgactcgtccaccggc
tcgcccgggacccacgccaaccacttcagcgacggcccgaaccccgaggtggagagctgc
ttaccaggagtgatcatgtctctgcacctgcgctacatctccttcctgtggcagatcgcg
gatctgggctgcaccctaaacacgccgttactgcgagacggcgctcgagtgctcatgaag
ctcatgcctccagataccaccacagtggagaacctgcgggcgacgtgtttggatcacgcc
aagctgggggagaacagtctgagccccaccctggactcgcgcttcttcgggccgtccgcg
tcacaagtgctctacctcaccgaggtggtgtatgcgctgctgatgcccgccagtggcacg
ctgggagacgacgcctgtgacttccagtacaacttcctgaagagtggtggtcttcctctt
gtactgggaatgctgacgaggaacaacttccttcccaatgcggacatggagacgaggcgc
ggctcttacctgaacgccctcaagatcagcaaactcatgctcaccgccatcgggttcggg
cacgtgaaggcagtggcagaggcgtgccagcctgtggtggagggcaccaaccccgcatct
ccgatcaaccaggcgactcacgatcaggctctggttctgcagaacgctctccagaacatc
cccaaccccggctccgagtgcatgctgcgcaacgtggccatccgattggcccagcagatc
tccgacgagaacttcttccaggcctcgaagtacatcccggacatctgtgtgatccgcgcg
gtgcagaagatcgtctgggcctcgggctgtgggatggtgcatctggtcttcagctccaac
gacgacatcagccagatctaccaaaagacgaatgcggggaacgagcctgacgctgaagac
gagcaggtgtgctgtgaggcgctggaggtcatgaccttgtgtttcgctctgctcccgacg
gcgctggacacgctcagcaaagagaaggcgtggcagaccttcatcatcgacctgctgctc
cactgccagagcaaagcggtgcgccagatggcccaggagcagttcttcctcatggccacc
aggtgctgcatgggacaccgccccctgctgttcttcatcaccctcctcttcaccgtcctg
gggagtacagctaaagaaagagcgaagcgcgctggcgattacttcacgctcttgcgccac
ttgctcaactacgcctacaacagcaacatcaacctgcccaacgccgaggtgctgctcaac
aacgagatcgactggctgaagaggatccgcgatgaggtgaaggcgacgggcgagacgggc
gtggaggacaccatcctcgagggccatctgggcgtcactaaagaactgctggccttccag
acgcccgagaagaagttccacatcggctgcgagagagacggggctaacctcataaaggag
ctgattgatgacttcatcttcccggcgtctaacgtgtacctgcagtacgtgaagagcggc
gagttcccggcagagcaagctatcccagtgtgcaccagtcccgcctccatcagcgccggc
ttcgagctgctcgtggcgctcgccgtcggctgcgtgcgaaacctcaagcagatcgccgac
acgctcacggacatgtactatctaggttgcgaggctctgacggagtgggagtatcttcca
ccggtggggccgaggccgaacaaaggcttcgtgggcctgaagaacgcgggcgccacctgc
tacatgaactcggtgatccagcagctctacatgatcccgcacatccggaacgggctcctg
gccatcgagggcaccggcagcgacatcgacgacgacacgtccggggacgagaagcaggac
aacgaggcggaggaccgtaaggagtacaacatcggcgtgctccggcatctgcaggtgatc
ttcgggcacctggcggcgtcccggctgcagtactacgtgccccgcggcttctggaagcag
ttcaggttatggggggaaccggtgaacctgagagaacagcacgacgcgctcgagttcttc
aactcgctggtggacagcctggacgaggcgctgaaggccctcgggcatcccagcatgctc
agcaggatcttgggcggctcgtttgcagaccagaagatctgtcagggttgtcctcacagg
tacgagtgtgaggagtccttcacaacgctgaacgtggacatccggaaccaccagaacctc
ctggactcgttagagcagtacgtcaaaggggatcttctggaaggagccaacgcgtaccac
tgcgagaagtgcaacaagaaggtggacacggtgaagcgtctgctcataaagaagctcccg
ccggtgttagccatccagctgaagcgcttcgactacgattgggagcgcgagtgtgcgatc
aagttcaacgattacttcgagttcccccgcgagctggacatggagccgtacacggtggcc
ggcgtggcgaagctggagggggacgaggtttcgccggagagccaggtcatcccggagaac
cccccggcgaatcccgacgctagctcgcgctacaggctcgtgggcgtgctagtgcactcg
ggtcaggctagcggcggacactactactcgtacatcgtgcagcgccacggcagcgacggc
gacgggctgaaggaccgctggtacaagtttgacgacggcgacgtgacggagtgtaagatg
gacgacgacgaggagatgaagaaccagtgcttcggtggagagtacatgggcgaggtgttc
gatcacatgatgaagcgcatgtcgtaccgccggcagaagcgctggtggaacgcctatatt
ctgttctacgagcgcatggacgccacagggggcgacgacgagctgctgaagtacatcacc
gaactcacgctcacgtcccggcccaaccaacccaagatgccctcggccatcgaggccagc
gtccgcaagcagaacgtgcagttcatgcacagccgcatgcagttcagcctcgagtacttc
cagttcatgaagaagctgctgacctgcaacagcgtatacctgaacccgcctccaggtcag
gatcacctgttaccggaggctgaagagatagcgatgataagtgtgcagctcgcggccagg
tttctgttcagcaccggcttccacagcaagaaggtggtccgaggcccggcgagtgactgg
tatgacgccctgtgtctcctgttgcgtcacagcaagagcgtgcgtagctggttagcccac
agcgtgttgttctcctttcccacgcgcttctccgagttcctgctggagtgtcccagcgcc
gaggtccgcggagccttcgccaagctgatcgtcttcatcgcacacttttccctgcaggac
ggcccgtgtcccgctccagttaccgctcccagcactcccacacaggcctgtgaccccgcg
accctgagcgatcacctgttacgggcggtgctgaacctgctgaggagagaagtgtccgaa
cacggccggcacctccagcagtacttcaacctgttcgtcatgtacgccaacctgggtctg
gcggagaagacgcagctgctgaagttaagcgtgccggcgaccttcatgctggtggcgctg
gacgagggtcccggtcctcccatcaagtaccagtacgcggagctgggcaaactgtacgcg
gtggtgtcgcaactgctgcggtgctgcgacgtgtcctcgcgcatgcagtcctccatcaac
ggtaaccccccgctgcccaacccgtacggggaccccggcctcacggctcccatcatgccc
ctgcagccgcccgtggccgagaccctgttcgtgcgcaccagctacgtgaagaagatcatc
gaggactgcagcaactctgaggagacggtgaagctgctgcgcttctgctgctgggagaac
cctcagttctcctccaccgtgctcagcgagctgctctggcaggtggcgtactcctacacc
tatgagctgcggccgtacctggacctcctgctgcagatcctgctgatcgaggactcgtgg
cagacgcaccggatccacaatgtcctgaagggcattcccgacgaccgagacgggctcttc
gacaccatccagcgctccaagaaccattaccagaagcgggcctatcagtgcatcaagtgc
atggtggcgctgttcagcaactgctctgtggcctatcagatcctgcagagtaacggggac
ctgaagaggaagtggacgtgggcggtggagtggctgggcgatgagctggagcgcaggcct
tacactgggaacccgcagtacacgtacaacaactggtctcctcccgtacagagcaacgag
acgtccaacggctacttcctggagcgctcgcacagcgcgcgcatgacgctagccaaggcc
tgcgagctctgtcctgaagaggtgagcgctcagtccctcaaacctccccgaaccccgctg
gagccggacgatcaggaagcccctgacgagcacgactcgacgccgcctgaagacaccgcc
ctctatcctcactctccagcgacaccgtctcagtatcagcaggtgaacactctccctcac
gggcagccgtacaccgggccggccgctcagcacatgaataaccctcagcgggcgagtcag
gagagctgggacgggtccgacgaggttcccccgacccagagcaaagagtag
DBGET
integrated database retrieval system
