Pimephales promelas (fathead minnow): 120465163
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Entry
120465163 CDS
T08155
Symbol
tnn
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04510
Focal adhesion
pprm04512
ECM-receptor interaction
pprm04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120465163 (tnn)
04518 Integrin signaling
120465163 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120465163 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pprm00536
]
120465163 (tnn)
Glycosaminoglycan binding proteins [BR:
pprm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120465163 (tnn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_TEN
EGF_Teneurin
Fn3_PBP1
Fn3_Dep-1_3rd
EGF_2
FN3_DSCAM-DSCAML_C
EGF_Tenascin
Fn3_VIN3
Interfer-bind
DUF4998
SdrD_B
DUF7949
EGF
hEGF
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
120465163
NCBI-ProteinID:
XP_039510736
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MIVRFNRLKRGYFLLGTLFTVTQLVLSEEVLPAEKEVTFSHVYRIDSGCKQSSQVAQLSQ
DQASEGQLVTVDGENDIVFKHNIRLQSAGCGCADSEDFKALLYRVNGLEEEVTYLKGQCA
QGCCKGGSGVDTSCSGHGTYQHDSCSCKCNPGWEGPDCSISSCPDECNDNGRCVDGRCVC
YEGYTGHDCSQLTCPNDCKDKGHCVDGKCVCFSGFSGEDCSVATCPNDCIGNGRCVDGLC
ICDEGFFGIDCSTVLGPKGLRLIKVTDVSLLVEWESVRGAEYYILSYYPKGDEGAIKEVQ
VENTKNSYLITGLRPGVTYIVQVYAVIRGINSDSDEIVATTEVSGIEGIKVVGQTEDSIQ
VDWKNPAIAVDHFKLTHSSPDGQGGEENVAMSQEAKTMHTIVGLNPGTEYQIGVQVIKGE
IEGKPSYATGVTDIDAPTNLATREVTENSATVTWNGVRAEIDGYTLTYSSAEGTSREIKV
AADATSYQLTSLKPGVLYTVFLWAYKGSRSSRKSMTEAETDIDAPTNLMSKEVTEDSVSV
TWDRVQADVDGYMLSYSSIDGFGQEVRVGADSTSYSFTGLKPGVLYTVYVWAIKGLRTSK
KSSTEASTEIDAPKNLKATDVKTETSTITWKAPQANIDGYILTYRAEDGSMQTLEKTLTA
QDNRFALSGLAMGKRYIVTLIAYRGSKRSRVVETIFSTESVAYPFPMDCTQIMRNGNMES
GIYTIYINSNQSRTMQVYCDMTTDGGGWIVFQRRNTGKLDFMKRWRDYMKGFGELKDEFW
LGLEKIHELTNTPTQYEVRFDLGFGSERKYAVYDNFKVAPSKQKFKLTIGNYKGNAGDAM
TYHQGGHFSTVDSDNDIALGNCALTHQGAWWYKNCHLANLNGKFGDNRHSMGVNWEPWKG
HLHSLDFAEIKIRPVGASGRQKRSLKRRVAVY
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgattgttagattcaaccggctgaagagaggttactttcttctggggacgctctttacg
gtgacccagcttgtgttgtccgaggaggtgcttccagcagagaaagaagtcacattcagc
catgtctacaggattgactctggttgtaagcagagttctcaagtggcacaactttcccag
gaccaggcctcagaaggacagttagtcacagtagatggagagaatgacattgtcttcaag
cacaacatacggctacagtcggctggttgtggatgtgctgactctgaggatttcaaagcc
ctgttgtaccgtgtaaatggcctggaggaggaggtcacgtacctaaaaggccaatgcgct
cagggctgctgcaaaggagggtcaggtgtggacaccagctgtagtgggcatggcacgtac
cagcatgactcctgcagttgtaagtgtaacccaggctgggagggtccagactgctccatc
tcatcctgccctgatgaatgcaacgataatggccgctgtgttgacggacgctgcgtttgc
tatgaaggctacaccggccatgactgcagccagctcacgtgccccaatgactgcaaagat
aaaggccactgtgtggatggcaaatgtgtgtgctttagtggattctcaggagaagactgc
agtgtcgcgacctgtccgaatgactgcataggtaatggacgctgcgtggatggactgtgc
atctgcgatgagggattctttggaatcgactgctccacggttctaggaccaaaaggcctc
cgtctgatcaaagtcacagatgtatctctgctggtggagtgggagtctgtaagaggagcc
gagtactacatcctgtcctactatccaaagggagacgagggagccattaaagaggtccag
gtcgaaaacacaaaaaactcctacctaatcacaggcctcagacccggagtcacgtacata
gtgcaggtgtacgctgtcatcaggggcattaacagtgattctgatgagatagtggctaca
accgaggtttctggtattgaaggaataaaggtggtgggccagacagaggactccatccag
gtggactggaagaaccctgcgatcgctgtggaccacttcaaattgacccattctagccct
gatggtcagggaggagaggagaatgtggccatgagccaggaggctaaaaccatgcacacc
attgttggcctcaacccaggaacagaatatcagataggtgtacaagtgatcaaaggtgaa
attgaaggcaagccatcgtatgccacaggggtcacagacattgatgccccaactaatctg
gcaaccagggaggtgacagagaactccgcaactgtgacgtggaatggtgttcgtgctgag
attgatggctacacgctgacttacagctctgcagagggcaccagccgagaaattaaagtg
gcagcggacgctacgtcttaccagctgacctctctgaagccaggagtcctgtacacagtg
ttcctctgggcctataagggctctcgttccagtaggaagagcatgactgaggctgagacg
gacatagatgctcctactaacctcatgagcaaggaggtgacagaggactcggtgtcagtg
acgtgggacagggtgcaggctgacgttgatggctacatgctaagctacagctcaatagat
ggcttcggtcaggaggttcgagtaggagctgacagcacctcctacagtttcactggtctg
aagcctggagttctctacacagtctatgtgtgggccatcaagggcctccgcactagcaaa
aagagctcaacagaagcatcaacagagattgatgcacccaagaatctcaaagccactgat
gttaagactgaaacctccactattacatggaaagctcctcaggctaatattgatggctac
atcctgacctacagggctgaggatggcagcatgcagactttggaaaaaactttgactgcc
caggacaatagatttgctctttctggccttgcaatggggaaaaggtacattgtcaccctt
attgcctaccggggctcaaagaggagtagggtagtggagacgatatttagtacagagagt
gtggcctacccgttcccaatggactgcactcagattatgaggaatggaaacatggagagt
ggcatctacacaatctacatcaatagcaaccaaagtagaaccatgcaggtgtactgtgac
atgacgactgatggtggtggctggattgtgttccagagacgaaacaccggcaaattagat
ttcatgaagcgttggagagactatatgaaaggctttggagaactgaaagatgaattttgg
ctcggcttggagaagatccatgagctgactaatactcctacacagtatgaggtgcgtttc
gatttgggctttggatcagagcggaaatatgccgtctacgataacttcaaagtagcacca
tccaaacagaagtttaaacttaccattggcaactacaaaggaaacgctggtgatgccatg
acctaccaccagggagggcatttctccacagttgattcagacaatgacattgcacttggt
aactgtgctctgactcaccaaggcgcctggtggtacaagaactgccacctggccaatctg
aacggcaaatttggggataacagacacagtatgggagtaaactgggagccatggaagggg
cacctgcactctcttgactttgccgaaattaaaatccgcccagtgggcgcatcgggcaga
cagaagaggtcactgaagaggagggtagcagtgtattaa
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