Pimephales promelas (fathead minnow): 120465171
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Entry
120465171 CDS
T08155
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04510
Focal adhesion
pprm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120465171 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120465171 (lamc2)
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GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
Baculo_PEP_C
Polysacc_lyase_14
Motif
Other DBs
NCBI-GeneID:
120465171
NCBI-ProteinID:
XP_039510748
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MWKMKSSWFFLCAACIWYPIHGTVQSSTTCSCHGNAQYCRQDHLGELYCINCQRNTEGRH
CENCKEGYHHQRAGDNCVPCNCNTAGSLGPFCNNEGRCACKQGFYGGKCDRCDDGSQVTP
NGCKPLRLSCRSRNNGRLTYNPEECLPCFCNGHSSVCSSADGYSVHNITSTFENGPEGWR
AATGQGVSSSQVQFRWSPTHKDLEVISKEILPVYLFAPASYLGNKALSYSQTLTFSLRLD
RGVRRPSISDVMLEGAGLKVSASLGDLRTVVPCGKKIAYTFKLDEQPGSKWKPQLSSTEF
QTLLSNLTAIKIRGTFGENGRGYLDDVSLVSAKLGPGTPADWVEKCRCPVGYDGLFCERC
ATGYRRRFPGQGPRSPCDPCSCQGGACDPETGGCYSADEIPNLQMCPKGYYVNRQQSNSC
QKCPCPEGEACYVIPVTQDVMCARCPRGTTGSRCEICDDGFYGDPLGEYGPPKQCQPCQC
NGHVDQNAIGNCDRRTGECRKCLNHSNGPKCENCEDGYHHIYPTDPCQACNCNRLGSVSN
SCSDKGQCECKEGYDGLKCEKSTCPSCFNPVKSKIEVYARQLQEMEDLFKGIGGDDAPVN
DALMEQAIRAAEVMVQTLKLRANELTSTEKQLQDKLASISRSQLREDRNMEALLTTLDGV
RNKDQRYRMEVSEISDLISVIRLKLQQAKRDIQQAEFPSGDGVPGADSLFDLVQRAADLA
EQHQGEAVTVETIAANSLTQSEKALDLIRGVINRENKVKDQVKDLKRLYEADVNKVLDME
NKATKLTDTAGKESEVAQNTLKQLSDLEKKLPKPLTKDIAGVVSMFDNLKGMVEGNLSQY
QDFQQYMLSEQKETADLFNKAKTFQQVQDKLLARANAAEAVKNKSLEIFANNKDSLEKTL
ATLKDFDDQIGGNKDLADAAIAKLPAINYTIQKAIADNTKTQDILDAMAPHYRDAQDTID
SLTSTATKLEGMSDSLPPSSDILEAATKLKEDVDGLNIQAALTRDRLNEEKNKAKEQINQ
AKNAIMESTGALGNAKNARDAVSDTLKTITDIMGSLGTPGTVDDKRVADLETAIAKSRNR
VETELRPRLRELEEKEAQQRASISGMINDIDTILADIANLEEIRKSIPNGCYNIPPIERP
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaatgaagagcagttggttctttctgtgcgcagcttgcatctggtatccaatt
cacgggactgttcaatcctccactacttgttcgtgtcatggtaatgctcagtactgcaga
caagatcatctaggagaactgtactgtataaactgccagagaaacacagaagggcggcac
tgtgaaaactgtaaagaaggataccaccaccagagggcaggagacaactgtgtgccttgc
aactgcaacactgcaggttctctaggaccgttctgcaacaatgagggacggtgtgcgtgt
aaacagggattttatggaggcaagtgtgatcgctgtgatgatggctctcaagtgactccc
aatggatgtaagcctttgaggctaagctgtcggtcacgtaacaatggccgtcttacatat
aatccagaggagtgcctgccctgcttttgcaatggccattcaagtgtgtgctcttcagct
gacggatattccgttcacaacatcacttcaacttttgaaaatggacctgagggttggcgg
gctgccactggtcaaggtgtgagctcctcacaagtgcaattcaggtggtctcccactcac
aaagaccttgaggtgatctctaaagagatccttcctgtttatctgtttgctcctgcatct
tacctggggaataaggcattgagctacagtcagacgctcaccttctctctgcgtctggac
agaggcgtccgtcgtccttccatctctgatgtcatgctagaaggagcaggtcttaaggtg
tctgcttcacttggagacttgagaactgtggtgccctgtggaaagaaaatcgcctacacg
ttcaaactggacgaacaacctggaagcaaatggaaaccgcaactctcatccacagaattt
caaacacttctgagcaatcttacagccattaaaatcagaggaacatttggtgaaaatgga
cgtggttatctggatgatgtctctctggtgtcagctaaactgggacccggcacccctgca
gactgggttgaaaagtgcagatgccctgttggttatgatggactgttttgtgagcgctgt
gccactggatacaggaggcgtttccctggtcaaggcccccgaagcccctgtgatccctgc
tcctgtcagggtggagcatgtgatccagaaacaggaggctgttactcggctgatgagata
ccgaatctgcagatgtgccctaaaggttattatgtcaaccgtcaacagtccaactcctgc
cagaaatgtccttgtcccgagggcgaggcttgctatgttattccagtaacccaggatgtg
atgtgtgcccgctgtccccgggggactacaggatctcgttgcgaaatatgtgatgacggt
ttttatggagaccccctgggagagtatggccctcccaaacagtgccagccctgccagtgt
aatggccatgtggaccagaacgccatcggcaactgtgaccgccgaacaggggagtgtcgg
aagtgcctgaaccacagcaacggccccaagtgtgagaactgtgaagatggataccaccac
atttaccccacagacccatgtcaggcctgcaactgcaatcgcctggggtctgtgtcgaac
tcatgtagcgataaaggccagtgcgagtgcaaggaaggttacgatggactcaagtgtgag
aaatcaacatgtccatcctgctttaacccagtcaagagcaagatagaggtttatgcacgt
cagctgcaggaaatggaggatttatttaaaggaattggaggtgatgatgctccagtcaac
gatgctctgatggaacaggctattagggctgcggaagtcatggtgcaaaccctgaaatta
agagcaaatgaactcacaagtacagagaaacagcttcaggataaactggcgagcattagc
cgatcccagctgagagaggacagaaacatggaggctttgttgacaacattggatggggtc
agaaacaaggatcaacggtacagaatggaagtttccgaaatcagtgacctcatcagtgtc
atcaggctaaaactgcaacaggccaaacgggacatccagcaggctgagtttccctcaggt
gatggggtgccaggtgctgactccttgtttgatttggttcagagagctgctgatcttgct
gagcaacatcaaggtgaggcagtgacggtggagaccattgcagcaaattctctaacccaa
tctgagaaagcactagatctcatccgaggtgtcatcaaccgagaaaataaggtcaaagac
caggtcaaggacctcaagagactgtatgaagcagatgttaacaaagtgcttgacatggag
aataaggccactaaactaactgatacagccggaaaggagagcgaagtagctcagaacact
ctgaaacagttatctgacctggagaagaaacttccaaagcctctgacgaaggacattgct
ggcgtggtttccatgtttgacaatctgaagggtatggtggaggggaatctatcacaatac
caggactttcagcagtatatgctcagtgaacagaaagagacagctgatctgttcaataag
gccaagactttccaacaggttcaagacaaacttcttgccagggcaaacgcagctgaagca
gtcaaaaataaatctctggaaatctttgccaacaacaaagatagtctggaaaagacacta
gcgacgctcaaagattttgatgaccagattggtggtaataaggatcttgccgatgctgcc
attgcaaaactgcctgctatcaattacaccatccagaaggccatagctgacaacaccaag
actcaggacattttggatgcaatggctcctcactacagagatgctcaggatactattgac
tctcttacaagcactgcaaccaaactggagggaatgtccgattctcttccgccttcttcc
gatattttggaagctgcaaccaaactgaaagaggatgtggatggactgaatatacaagca
gctttaactagggacagattgaatgaagagaaaaacaaggcaaaagaacagattaatcaa
gcgaagaatgctatcatggagtctactggagctcttggaaatgcaaagaatgctagggat
gctgttagtgatactttgaagacaatcactgatattatgggctcactgggaactcctggg
acagtcgacgacaagcgagtggccgacctagagaccgccattgctaaaagccgcaaccgt
gtggagacggagctgaggcccagactcagggagctggaggagaaggaagcccagcagaga
gccagcatttcaggcatgatcaatgacattgacaccatcctggctgacattgccaactta
gaggagatccgtaaaagcattccaaatggctgttacaacataccacctattgaaaggccg
taa
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