Pimephales promelas (fathead minnow): 120465296
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Entry
120465296 CDS
T08155
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120465296
04121 Ubiquitin system [BR:
pprm04121
]
120465296
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120465296
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120465296
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
120465296
NCBI-ProteinID:
XP_039510910
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MLNVLEPRYSIPSRKRMSEEIIPKLYNEVKQKITLSLTTADRVALTCDGWTSRHQDTYVT
ITCHYLDDWVLISNVLQTRAMQDSHTGANICALLSDALEEWGLTKKDPIIVTNNNATNMI
RAVEMMELLHIGCFAHTINLASQAALKLPAISRLLGRVRRIVTFFHRSANANKVFKEKQR
LLNLPCRKLTIDVVTRWNSALDMLDRFLEQQPAISAALLSPELLDEMRSTAGDSTVIKEL
KSAIHDNLRFRYANLKEKLYVASALDPRFKTLPFISDEEREDTFTTLISEIVTLEQVKQQ
GSDSAGNGGSAPVQEQKSLSEGDSDPSPAPPKRSKESCALLDLLGAAYVCAPVADRAREE
VGKYREVTPIPLSDDPLKWWCKHEGVYPLLSLQAKRYLCVPGTSVPAERIFSTAGDIITA
QRSCLLPEHVDQLLFLQKNYSFQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatgtcctggagccacgttattccattcctagtcgcaaacggatgagcgaagag
attatcccaaaactgtacaatgaagtgaagcaaaagattactctgtccctaacgacagcg
gacagagtagctctcacatgcgatggttggacgtcaagacatcaagacacatatgtcaca
attacctgccactatttagatgactgggttctcatttcaaacgtgttgcagaccagagct
atgcaggatagtcacacaggagcaaatatatgtgcattgctttcagatgcgttggaagag
tgggggcttactaagaaagacccgatcattgtgaccaacaacaatgctaccaatatgata
cgtgccgtggagatgatggagctgctccatattggctgctttgctcatacaataaatcta
gcatcgcaagctgcgctgaaacttccggccatctctcgcttgctaggccgagttaggcgc
atagtgacattctttcacaggagcgcaaacgccaacaaagttttcaaagaaaaacagagg
ctgctgaacttgccctgtcgcaaactgacaattgacgtggtgaccaggtggaacagcgcg
ctggacatgctcgacagatttttggagcagcaaccggcaatctcagccgcacttctttct
cctgaactccttgatgagatgcgctcgactgccggtgattcgactgtcattaaggaactc
aaatctgccatacatgacaacttgaggtttagatatgcaaatcttaaagagaagctgtat
gttgcatctgccctggaccctcgtttcaagactcttcctttcatctctgatgaggaacgt
gaggacacattcacaacattgatcagtgagattgtcactcttgagcaagttaagcagcaa
ggatctgatagtgctggtaatggaggcagtgcacctgtccaggagcaaaaatcccttagt
gaaggtgatagtgacccctccccagccccaccaaagaggtcaaaagaatcctgtgctctg
ttggatctgcttggggcagcatatgtctgtgctccagttgctgacagagcacgagaagaa
gttggcaaatacagagaagttacacctatacctctctcagatgatccacttaagtggtgg
tgtaagcatgaaggagtgtacccacttttgtccctccaggcaaaacgctacctttgtgtt
cccgggaccagtgtccctgctgaaagaattttctccacagctggagacattattacagct
caaagaagttgccttctgccagagcacgttgaccaactccttttcttgcaaaaaaattac
agtttccaatga
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