KEGG   Pimephales promelas (fathead minnow): 120465348
Entry
120465348         CDS       T08155                                 
Symbol
wdr1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
pprm  Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pprm04990]
    120465348 (wdr1)
Domain-containing proteins not elsewhere classified [BR:pprm04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   120465348 (wdr1)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_HPS5 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th RMC1_N NBCH_WD40 Beta-prop_EIPR1 Beta-prop_RIG_1st PROPPIN PEP5_VPS11_N Beta-prop_WDR11_1st Beta-prop_SCAP WD40_like DUF7165 KNTC1_N Beta-prop_IFT122_2nd Beta-prop_DCAF4 WD40_RFWD3 DUF5711 HPS3_N Beta-prop_DCAF12 Beta-prop_ELP1_2nd Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 120465348
NCBI-ProteinID: XP_039510986
LinkDB
Position
Unknown
AA seq 606 aa
MSYELKRVFASLPHMERGVAKVLGGDPKGNNFLYTNGKSVIIRDIENPAIADVYTEHPHP
VIVAKYSPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRVAVV
GEGREKFGAVFLWDSGSSVGEIVGHSKIINSVDIKQTRPYRLVTGSDDNCTTFLEGPPFK
FKCTMSDHSRFVNCVRFSPDGNRYASAGADGQIFLYDGKSGEKLGTLGGEKAHDGGIYAV
SWSPDSTQLISASGDKTVKLWDVATGTGVTTFNLGSDVLDQQLGCLWQKNHLLSVSLSGF
INYLDKNSPDRPLRTIKGHTKSIQCLTVHKADGRLNIYSGSHDGHINYWDSETGENEQFL
GKGHSNLVSKMAVDDAGRLVSSSMDDTVRYTDLSKREYSGSDMIKMDMQPKCVSVGPGGL
AVTVCIGQLVLLKDKKKLFTLDSLDYEPEAVAVHPGGGAVAVGGADGKVHLYSVQGNTLK
HDGKVLEVQGPVTDMSYSKDGAFLAVTDEKKVVTVFTVADGYTEKSEFYGHHAKVVCVSW
SPDNEHLATGGMDMMVYVWTVSDPDKRIKLPDTHRLHHVSGLAWLNANTLVTTSHDACIK
QWTLKI
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgtcttacgagctgaagcgcgtgtttgccagcctgccccacatggaaaggggcgtggcc
aaagtcctgggcggagaccccaaggggaacaacttcctgtacaccaacggcaagagtgtg
atcatcagggacatcgagaaccctgcgatcgcagacgtctacaccgaacacccgcatccg
gtgatcgtggcgaaatactctcccagcggattctacatcgcgtccggcgacgtgtcgggg
aaaatccgcatctgggacacgacgcagaaggagcatctgctgaagtacgagtaccagccg
ttcggagggaagatcaaggacatcgcctggaccgaagacagcaagagagtggccgtggtg
ggggaggggcgagagaagttcggcgcggtgttcctgtgggattcgggctcgtctgtcgga
gagatcgtgggtcacagtaagatcatcaacagcgttgacattaaacagacgaggccgtat
cgtttggtcacgggcagcgacgacaactgcaccaccttcctcgagggcccgcccttcaag
ttcaagtgcaccatgagcgatcacagtcgcttcgtgaactgtgtgcgcttctctcctgac
gggaaccgctacgcctcggctggtgccgacggacagattttcctgtacgatgggaagagc
ggagagaagctgggaactctgggaggagagaaggctcacgacgggggcatttacgctgtg
agctggagtcccgacagcacgcagctgatctccgcatcgggggacaagacggtgaagctg
tgggacgtggccaccgggacaggggtcacgacctttaacctgggctcagatgtgctggac
cagcagctgggctgcttgtggcagaagaaccacctgctcagtgtctctctgtcaggattc
atcaactacctggacaagaacagcccggaccggcccctgcgcaccatcaagggtcacacc
aaatccatccagtgtctgacggttcataaagcggacggccggctgaacatctactccggc
agtcatgatggacacattaattactgggactctgagaccggagagaacgagcagttcctg
gggaagggccactctaacctggtgtcgaagatggcggtggacgacgcgggtcgcctggtg
tccagcagtatggacgacaccgtccgctacaccgacctgagcaagagagagtacagtggg
tctgatatgatcaaaatggacatgcagccgaagtgtgtgagtgtcggtccaggaggcctc
gccgtcactgtgtgtattggacagctggtcctgctgaaggataagaagaagctcttcacg
ctggactctctggactacgagcctgaagctgttgccgttcacccagggggcggagccgtg
gctgtgggcggagccgacgggaaggtgcacctgtactctgtccagggaaacaccctgaag
catgatgggaaggtgctggaggtccaggggcccgtgacggacatgagctactcgaaggac
ggggcgttcctggccgtgacggacgagaagaaggtcgtcactgtcttcaccgtcgcggac
ggatacacggagaagagcgagttctacggccaccatgcgaaggtggtgtgtgtgtcctgg
tcccctgataacgagcacttggccacgggcgggatggacatgatggtgtacgtgtggacc
gtcagcgaccccgacaagaggatcaagctgccagacacccatcggctgcatcacgtcagt
ggtctggcctggctgaacgccaacacactcgtcacgacgtctcacgacgcctgcatcaaa
cagtggactctgaaaatctga

DBGET integrated database retrieval system