Pimephales promelas (fathead minnow): 120465391
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Entry
120465391 CDS
T08155
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120465391 (irx1a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120465391 (irx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
MRP-S32
Motif
Other DBs
NCBI-GeneID:
120465391
NCBI-ProteinID:
XP_039511053
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGGDRPGVLTPSSRGGSAEIGGSASAAAAAVSSVLGMYPYAH
NYSAFLPYTSADLALFSQMGSQYDLKDSPGVHPASFAAHTSPAFYPYGQFQYGDPSRPKN
ATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTW
GARSKEDEDGNIIFGSDTEGDAEKNEDEEEIDLESIDIDKIDDNDGDQSNEEDEEKRGEL
ESLREKRRALALEAHEAFEKSKSNVISAGKEPSDGNNNNTRVLSPGRQGGFQVPVSNKPK
IWSLAETATSPDSSQKPTSPSVPATPAGTHPAFLPNHGLYTCQIGKFHNWTNGAFLGQNS
LLNVRSFLGVNQHHHNHNHPVHSQQQQQASTLAAANSDKAPEDLSPKHIDRENVIRNESP
TQPLKSSFRPLHDSPRNQQESTQRVLTALSSA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctgggttacccgcagtatttgagtgcctcccaggcggtgtacgga
ggcgatcgcccgggagtgttaactccgtcgtcccgcggagggagcgcagagatcggggga
agcgcgtccgcggcggccgctgccgtgtcctcggtgttgggcatgtacccgtacgcacac
aactacagcgcctttctgccttacaccagcgccgatttggctcttttctcccaaatggga
tctcagtatgatttaaaagacagccctggcgttcaccctgcgagctttgctgcccacacg
agccctgccttctatccctacggccagttccagtatggagacccttccaggcctaaaaac
gccacacgggagagtaccagcactctgaaggcctggctcaacgagcacaggaaaaacccc
tatcccaccaaaggcgagaagatcatgctggccatcatcaccaagatgaccctcacgcaa
gtgtccacctggttcgccaacgccagaaggagactcaagaaggagaacaaggtgacatgg
ggcgccagaagtaaagaagacgaagatggcaatattatatttgggagcgatactgagggg
gacgccgaaaagaacgaagatgaagaggaaatagatttggagagcatagatatcgataag
attgacgacaacgacggagatcaaagcaacgaggaggatgaggaaaagcgcggggagctc
gagagcttgcgggagaaacggcgcgcgctcgcgctggaggctcacgaggccttcgagaaa
tccaaatcaaacgtcatttctgccggcaaagagccgtctgacggaaacaacaacaacacc
agggttctgtcaccgggccgacagggaggttttcaagttccggttagcaataagcccaaa
atatggtcgttagcagaaaccgcaaccagtccagatagctcgcaaaaacctacgtcaccc
tctgttcccgccactcccgcgggcacacacccggccttcctgcccaaccacggactgtac
acgtgccagattgggaagttccacaactggacaaatggcgcgtttctgggccaaaactcc
ctgctgaacgtccgatctttcttgggcgtcaatcagcatcatcataatcataatcaccct
gttcactcacagcagcagcagcaggcctcgaccctggcagccgcgaacagtgacaaggcg
ccagaagacctcagtccaaaacacatagatcgtgaaaatgtcatcagaaatgaatcgcca
acgcaacctttaaagtcatcgtttcgtcctcttcacgacagcccaagaaaccagcaggaa
tcaacacagagggtcctaacagctctctcttccgcttga
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