Pimephales promelas (fathead minnow): 120465407
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Entry
120465407 CDS
T08155
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120465407 (irx2a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120465407 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
120465407
NCBI-ProteinID:
XP_039511069
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPLAAPRSEELARSSSGSAFSPYPGSAAFTASASGFSSPLS
YSTDPATGFPSYMGSPYDAHTTGMAGAISYHPYGSPGYPYQLNDPAYRKNATRDATATLK
AWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDED
EDDGDGERKDERPDKTMDNSEASAEDEGISLHVDALTDHSCSVESDGEKVTCRTGDLVCD
SGPDTKDKCDASDLDTGREERHRGPSPKPVTSPPLTGVEAPLLTHHHREDTRNSTNKTCL
DGQNQTVKPKLWSLAEIATSDPKQHQHQHLGQNCPPGVGLLTSTAPSASPAGAVYPATSI
LGRPLYYTSPFYSNYTNYGNFSPLQGQGILRYNSAGEGLLHKQSCDPLLKTNPNQTEQHF
RASNAESKKDPTEVFTVRHQSYLSS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggcgctgtactcctgt
ccgctggccgccccgaggagtgaggagctggcccggtcatcgtccggttcagcgttcagc
ccgtaccccggatcagctgcgttcacagcctcggccagcggattctccagccctctgtcc
tactctacagatccagccacgggattcccgtcctacatggggtctccgtatgacgcgcac
acaacggggatggcaggagccataagttatcacccgtacgggagtcccggttacccgtac
cagctgaatgatcccgcttaccggaaaaatgccacgcgggacgcgacagcgacgttaaaa
gcttggctgcaggaacacaggaaaaacccttatcccacgaaaggagaaaagatcatgctg
gctatcatcacgaaaatgaccctcacgcaagtgtccacctggttcgctaatgccagacgg
agactcaagaaggaaaacaagatgacatgggcaccgcggaataaaagtgaagatgaagat
gaagacgacggcgatggagagagaaaagatgagcgaccggataaaaccatggacaacagc
gaagcgtctgcggaggacgaagggatcagtttgcacgtcgatgccctgacagatcactcc
tgctcagtggaatcggacggagagaaggtcacgtgtaggaccggggacctggtttgtgat
tctggacctgataccaaggacaaatgcgacgcgagcgatctcgacacgggccgcgaggag
aggcatagaggcccgtcacccaagccggtgacctctccccctctgactggggtggaggcc
cctctcttgacccatcatcacagagaggacacccgaaacagcaccaacaaaacatgcctt
gacggtcaaaaccaaaccgtcaaacctaaactatggtcattagctgagatcgccacttcg
gacccaaagcagcatcagcatcagcacttgggacagaactgtcccccgggcgttggcctt
ttgacctccacggcgcccagcgcgtccccggcgggcgcagtctaccccgccacttccata
ttgggaagacctctttattacacctctccgttttatagtaattacacaaactatggcaac
ttcagcccgctacagggccaagggatactgcgctataattcagctggggagggacttctg
cacaaacagagttgcgatccccttctaaagactaatccaaaccagactgaacaacatttc
agggcctccaatgcagaatccaaaaaagaccccaccgaggttttcacagtaagacaccag
tcttacctgtcgagttaa
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