Pimephales promelas (fathead minnow): 120465416
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Entry
120465416 CDS
T08155
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120465416 (irx4a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120465416 (irx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120465416
NCBI-ProteinID:
XP_039511083
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTSCCESNTRSISDSSAQTPVYCPVYESRLLATARHEL
SSAAALGVYGNPYTSSQGYGNYVTYGADASAFYSLGTFDAKDGSASAHAGITQAAAYYPY
DPSLGQYQYDRYGSMEGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMT
LTQVSTWFANARRRLKKENKMTWPPRNKGSDDKKYDDDDEDGSQEDQIKSETNDDESKSR
EDKELQLSDLDDFDTIESESSECELKHRFHMNAHMATTDDRIKEPSPKLSIPGLLEAERD
LAKSCLKSTSEDCEHDLRHVKTCFQQQGHPLLDSKPRIWSLAQTATSLNSTEYSSCMLRC
QPSPSASSPVNGLERQQDSPVTTLRNWVDGVFHDPLFRHSSLNQAQTNTTVSWTTTTKGS
ILETGALGRSVGNSNVIKTQQQEASKDSMTFSKGVNKIFCS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcaattcggatatccttactcttctgcacctcagttcctcatgaccacc
aactctttgacatcttgctgcgagtcgaacaccaggtccatctcggattcgtccgcgcag
acgcccgtgtactgtcccgtgtatgagagcagactgttggccaccgccaggcacgagctg
agctccgccgctgcgctgggagtctacgggaacccatacacgagcagtcagggttatggg
aattatgttacctatggagctgacgcctccgctttctactctttgggaacatttgatgcc
aaagatggaagtgcgtctgcgcatgcgggaattacccaggctgccgcatattacccatat
gatccctccctgggacagtaccagtatgacagatatggatctatggaaggaggaactcga
agaaagaacgccacacgggagacgacgagcactttgaaagcatggctccaggagcacagg
aaaaacccctatcccaccaaaggagagaagatcatgctggccatcatcaccaagatgacc
ctcacgcaagtgtccacctggttcgccaacgccagaagaagactcaagaaagagaacaag
atgacatggccaccaagaaacaagggctcagacgataagaaatatgacgatgatgatgag
gatgggtcacaagaagatcaaatcaaaagtgaaaccaatgatgacgagagcaaaagtcga
gaagacaaagaacttcagttgagtgacttggacgactttgacaccatcgagtctgagagc
tcagagtgtgaactcaaacaccgctttcacatgaacgcgcacatggcgaccaccgatgat
cgcatcaaagaaccatcgccaaaactctccattcccggtctgctcgaagctgagcgtgat
ctcgccaaaagctgcttgaaatccacttccgaagactgcgaacacgaccttcggcacgtc
aaaacgtgtttccagcagcagggccatccattactggacagcaaaccccgcatctggtct
ctggcccagacagcgacctcgttgaactcgacagagtactcctcgtgtatgcttagatgt
caaccatcaccctccgcctcctcacctgtaaacggcctggaaagacagcaggattcacct
gttacgactctcagaaactgggtagatggagtttttcacgaccccttgttcagacacagc
tccttaaaccaagcacagacgaacactacagtttcgtggaccaccacgaccaaaggctca
atcttagagactggagcccttggacgctccgtagggaacagcaacgtgataaaaacacag
cagcaagaggccagtaaggacagtatgacattttcaaagggggtgaataaaatattctgt
tcctag
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