Pimephales promelas (fathead minnow): 120465751
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Entry
120465751 CDS
T08155
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120465751 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120465751 (cstf2)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120465751 (cstf2)
U7-dependent histone pre-mRNA processing factors
120465751 (cstf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
120465751
NCBI-ProteinID:
XP_039511108
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MANLALAAAAAAAARDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRE
TGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIE
SPYGDGCTTEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYAL
LQAQVVMRIVDPEIALKMLHRPAVVQPINPSPQPGPVPVPNQPLPQPNVPVSQPQPMPGM
HVNGAPQMMQPPQMGGGVPGPMPGQGPMGPAGGMQPQIGIPSGGPVPMDRGPAQDIFRAA
PEGLSAEDWVSGTKTRTLQDSSVGAAGQAAIERPQVPIVDPRAPMRGAPQGPPGIPPRGL
LGDGPNDPRGGSLVNVTGDVVEPGRGYIGGPPQHQGPPMHMAPPDMRGPLDMRGGPMMGE
PRGPMMDQRGPPMEARGRDPRAVDARGPISGQRVPVAGGMQGPPPHGMGQSAPPAVRPGP
TPDVSSQDHEKAALIMQVLQLTPEQIAMLPPEQRQSILILKEQIQKTAGAP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttagctcttgccgccgcagcagccgcagctgccagggatcctgccgtggac
cgctcgttgcgttcggttttcgtgggaaacattccatatgaggccacagaggagcaactg
aaagacatcttctccgaggttggacttgtcgtcagttttaggttggtgtatgacagagaa
acaggtaagccaaagggatatggcttttgtgagtaccaggatcaggagacggcgctcagt
gccatgcgtaacctgaacggcagagagtttagtggcagagccctccgcgtcgacaacgct
gctagtgagaagaataaagaggagctcaaaagtttgggtactggtgcccccattattgag
tccccttatggagacggctgcacaacagaagaagccccagagtccatcagcagggcagta
gccagcctgccccctgagcagatgtttgagcttatgaaacagatgaagctctgtgtgcag
aacagtccccaggaggccaggaacatgctcttgcagaaccctcagctggcctatgccttg
ctgcaagctcaggtggtcatgaggattgtagatcctgaaatcgctctgaaaatgcttcac
cgtccggctgtagttcagcccattaacccgagccctcagcccgggccggtgccggtaccc
aaccaacccctccctcagcccaatgtccctgtctctcagccacaaccaatgcctggtatg
catgtgaacggagccccccaaatgatgcagcctccacagatgggtggtggagtacctgga
ccaatgccaggacagggacccatgggaccagctggtgggatgcagcctcagatagggatc
ccatcaggaggccctgtgcccatggataggggaccagcacaggacatatttagagcagct
ccagaagggctcagtgctgaggactgggtcagtggtacaaagacaagaacccttcaggac
tcttctgtgggagcagccgggcaggctgctatcgagcggcctcaagtgccaatagtagac
ccacgtgccccaatgcgaggggccccgcaaggccctccagggatcccacccagaggcctt
cttggtgatggtccgaatgacccacgaggtggatctttggtcaatgttactggagacgtc
gtggagccggggcgtggttacatcggaggccccccgcaacatcagggaccgcccatgcat
atggctcccccagacatgcgtggtcctcttgacatgagaggaggacccatgatgggagaa
cctagaggtcctatgatggaccagcgtggtccacccatggaggcaagaggtcgtgatcca
agagctgttgatgctcggggtcccatatctggccagagggttcctgttgctggtggaatg
cagggtcctccgccccacggcatggggcaaagtgcacctccagcagtgagaccaggtcct
acgcctgatgtgtcatcacaagaccacgaaaaggctgccttgattatgcaggttttgcag
ctgaccccagaacagatcgccatgttgccaccagagcagagacagagtatcctgatacta
aaggaacagattcagaagacagcaggcgccccctga
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