KEGG   Pimephales promelas (fathead minnow): 120466150
Entry
120466150         CDS       T08155                                 
Symbol
xpo1b
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03008  Ribosome biogenesis in eukaryotes
pprm03013  Nucleocytoplasmic transport
pprm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120466150 (xpo1b)
   03008 Ribosome biogenesis in eukaryotes
    120466150 (xpo1b)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120466150 (xpo1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprm03019]
    120466150 (xpo1b)
   03009 Ribosome biogenesis [BR:pprm03009]
    120466150 (xpo1b)
   03016 Transfer RNA biogenesis [BR:pprm03016]
    120466150 (xpo1b)
   03036 Chromosome and associated proteins [BR:pprm03036]
    120466150 (xpo1b)
Messenger RNA biogenesis [BR:pprm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     120466150 (xpo1b)
Ribosome biogenesis [BR:pprm03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    120466150 (xpo1b)
  Pre-60S particles
    120466150 (xpo1b)
Transfer RNA biogenesis [BR:pprm03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    120466150 (xpo1b)
Chromosome and associated proteins [BR:pprm03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     120466150 (xpo1b)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom Hydrolase_3 BspA_v
Other DBs
NCBI-GeneID: 120466150
NCBI-ProteinID: XP_039511138
LinkDB
Position
Unknown
AA seq 1071 aa
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVSLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNIRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEDAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISA
TLNPTNPVNNQGFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagcagaccatgcagccagacagctgctggactttaac
cagaaactggatatcaacctgctggataatgtggtcaactgcctgtaccatggggtcggg
ccacagcaaagaatggcccaggaggtgctgactcatttgaaggagcacccagacgcgtgg
acacgagttgacaccattctagagttctctcagaatatgaacaccaaatactatgctctg
cagattctggaaacagttattaaaacaagatggaagattctgcccagaaaccaatgtgaa
ggcattaaaaagtatgttgtggggctgattatcaagacatcatcagatgcagccaatgtt
gagaaagaaaaggtgtacattggaaaactcaacatgatattagtacagatcctgaagcag
gaatggccaaaacattggcccacatttatcagtgacattgttggtgctagccgcaccagt
gagagcctttgccagaacaacatgatcattctgaaactcctcagtgaagaggtgtttgac
ttctccagtggccagatgacacaagtaaaagccaaacacctgaaggacagcatgtgcaat
gagttctctcagatattccagttgtgccagtttgtgatggaaaattcccagaatgcccct
cttgtgcatgctaccttggagactctgctaaggtttctcaactggattcccttgggctat
atctttgaaactaaactcatcagtaccctggtgtacaagtttttaaacgtcccgatgttt
cgcaatgtgacactgaaatgcttgactgaaatagcaggagtcagtgtcagccagtacgaa
gagcagtttgtcagtctcttcactctgaccatgatgcagctcaaacagatgcttccactg
aacaccaacatccggctggcgtatgcaaacggtaaagatgatgagcaaaactttattcag
aacctcagcctgttcctctgcaccttcctcaaagagcacggacagctgatagaaaagaga
ctgaacatcagagagacgcttatggaggctctacattacatgttgctggtgtcagaggtg
gaggagaccgagatctttaagatctgtttggagtactggaaccaccttgcagctgagctg
tacagagagagtcctttctcaacttcgacttctcccttactctcaggcagccaacacttt
gatgtaccgccccgcagacagctctacctacctgtgctgtctaaggtacgtttgttgatg
gtgagccgcatggccaagccagaggaagtgctggtggtggagaacgatcagggcgaggtg
gttcgagagttcatgaaggatacagactccatcaacctctacaagaacatgagggagacg
cttgtctatcttacccatctggattatgccgacacagagcgtattatgacagaaaagctt
cacaatcaggtgaacggtacagagtggtcctggaagaacctgaacacactatgctgggct
attggttccatcagtggagctatgcatgaagaagatgagaagcggttcctcgtcactgtc
ataaaggacctgctgggactatgtgagcagaagagaggcaaggataacaaggccatcatt
gcctccaacatcatgtacattgttggccagtacccacggttcctacgtgcgcactggaaa
ttcttgaagactgttgttaataaattgtttgagtttatgcatgaaacccatgatggagtt
caagacatggcgtgtgacacgtttataaagatagctcagaagtgtaggaggcattttgtg
caggtgcaggtgggagaggtgatgcccttcattgatgagatcctcaacaacatcaacacc
atcatctgtgacctgcagccccagcaggtgcatacattttacgaggctgttggctatatg
attggagcacagacggatcaggctgtacaggaacacctaatagagaagtacatgttgttg
cctaaccaggtgtgggacagcatcattcagcaggccaccaagaatgtggacattcttaag
gacccggagacagtgaagcagttgggaagcatcctgaagaccaacgtccgagcgtgtaaa
gccgtgggacacccttttgttattcagttgggtcgcatctacctggacatgctcaatgta
tacaagtgcctcagtgaaaacatctctgctgccatccagaccaacggtgagatggtgaca
aagcagcctctcatcaggagcatgcgcaccgtgaagagagagactctgaagctgatctca
ggctgggtcagccgctccaatgacccacagatggtgggggagaactttgtccctccgctg
ttggatgctgtgctcattgattaccagcgcaatgtcccagcagcaagagaaccggaagtg
cttagtaccatggcaacaatcgtaaacaaactgggtggacacattactggagagatccct
cagatatttgatgcagtgttcgagtgcacattaaacatgatcaacaaagattttgaagaa
tacccagaacaccggacacatttcttctatctgctgcaggcagtgaactctcactgtttc
ccagcattcctggctatcccaccagcccagtttaagcttgtgcttgactccattatatgg
gcttttaaacacactatgagaaacgtggcagacactggccttcagattctctacacgctg
ctgcagaacgtggcccaggaggatgcggcagctcagagcttctatcagacatacttctgt
gacatcctacaacacatcttctctgttgtcacggatacatcacatacagccggtttgacc
atgcatgcttctattttggcgtacatgtttaaccttgttgaggaaggaaaaatcagtgca
actctgaaccccacaaacccagtaaacaaccaaggatttatccaggagtatgttgccaac
ttgctcaaatcagctttcccccacttacaagatgcccaagtgaaagtatttgtgactggc
ctgttcagtttaaaccaagacatcccagcattcaaagaacacttgagggatttccttgta
cagatcaaggagtttgcaggcgaggacacctctgatctgtttctggaggagagggaggct
tcattgcgccaggcccaggaggaaaaacacaagctgcagatgtctgtgcctggcatcctc
aaccctcacgaaataccagaggagatgtgcgactga

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