KEGG   Pimephales promelas (fathead minnow): 120466807
Entry
120466807         CDS       T08155                                 
Name
(RefSeq) mRNA export factor-like
  KO
K14298  mRNA export factor
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120466807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprm03019]
    120466807
   03036 Chromosome and associated proteins [BR:pprm03036]
    120466807
Messenger RNA biogenesis [BR:pprm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120466807
Chromosome and associated proteins [BR:pprm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120466807
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Exonuc_X-T_C Beta-prop_EML Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 120466807
NCBI-ProteinID: XP_039511362
LinkDB
Position
Unknown
AA seq 244 aa
MTPQKASLLLNPHLFPLVCTLSGIQAKANSFLDTRSPNPMMSLQMPERCYCADVVYPMAV
VATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQSKPTGFALGSIEGRVAIHY
INPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDA
RTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAEELKP
RNKK
NT seq 735 nt   +upstreamnt  +downstreamnt
atgactcctcagaaagcttccttgctcctcaatcctcatctcttccccctcgtgtgcaca
ctttcaggcattcaggcgaaagcgaattcttttttggatacacgttccccaaaccccatg
atgtccctgcagatgcctgagaggtgttactgtgcagatgtggtatatccaatggctgtc
gttgctactgcagaacgtggtcttattgtttaccagttggaaaatcagccttcagagttt
cgacgtatagattcgcctctgaagcatcagcatcgctgtgtggcaatctttaaggacaag
cagagtaaacctaccggttttgcactgggcagcattgagggccgagttgccattcactac
ataaacccacctaacccagccaaggacaatttcacctttaagtgccacaggtcaaatgga
accaatactgcaacaccccaagatatttatgctgtaaatgctatctcctttcaccctgtc
catggcactctggcaacggtaggctctgatgggcgcttcagtttctgggataaagatgcc
cgcactaagctgaagacatctgaacaattagatcaaccaataacagcctgttgcttcaat
aacaatggcaacatatttgcctacgcctccagctatgactggtctaagggacacgaatat
tacaatccccagaaaaagaattacatcttcttgaggaatgcggctgaggaactgaagcct
cggaacaagaaatga

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