Pimephales promelas (fathead minnow): 120466847
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Entry
120466847 CDS
T08155
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120466847 (tbc1d4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120466847 (tbc1d4)
Membrane trafficking [BR:
pprm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120466847 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120466847 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120466847 (tbc1d4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TBC1D_hel
DUF3350
PID
PTB
IHD1_N
Motif
Other DBs
NCBI-GeneID:
120466847
NCBI-ProteinID:
XP_039511426
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MEGQDGKGNNNNNDGNQKADKRFALCYMGWSSLDSRTTLPMLPWLVAEIRRKSEKNEPGP
AQAREVQLTLSPSLIRCVPSNSSNPSVFIFEHKAQFISRFIHNSHDLSYFAYLIRSQPEN
PESEMACHVFKACDPNQVPEVISSIRQVSKAALKEESKPKQDSDESFYNSQKFEVLYCGK
VTVNYKKAPSTLIDDCIDKFRQHEIERKRLRLLSGQRSSTEAPVEFIMGDDPLSSSLCEV
DEPEAEHGSIEEDLSELANGKLALTNSSSTGSLRGAFPECILEDSGFGEQQEIRTRCNSL
AGGLQKKPRETGKGSTRRRHASAPNNVQPTDADKNRTMLFQVGRFEVNLISPETKTVVLE
KNFKDISSCSQGVKQTDHFGFICRDVEVSGPAQYVCYVFQCASESLVDEVMLTLKQAFTT
AAAMQSSKNQIKLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLSDNEQVNIFERV
QKMKPASDQEENELVILHLRQLCETKQKSHVHIGEVSQQNASGSTLTSDNSTAGRNKLDL
LKNKARSSLTSSLENILSRGASRMRMRLGSMGSFDRGDSPGDSPPGTPPSYLEDDPDAPQ
FRRRAHTFSHPPIKKKISFTEVSSQACKAPLRRQQSLAPELLQSSTVGISRVRSVSESDS
YFSLSSSFHTPTFLKSFYQGSLGSLASLSDSGSLKSGNGEGRKRSLSGCSTDSLTLVPPR
RVSWRQKIFLRVASPMNKPSASMQNVDHMDGRELLPLSPRALNQDQDSQASPLSPEQGFG
GEKCRRCPADYRALWKKAIHQQILLIRMEKENQRLEASRDELHIRKMKLDYPEVCPCSKD
LLALWDKKLSSPCRTKVQWDKEEINSAVCQGVPKSRRGEVWLLLFQQYRLRHRLPQRQQS
PETPYQDLLKQLTAQQHAILVDLGRTFPTHQYFSAQLGAGQLSLYNLLKAYSLLDTEVGY
CQGISFVAGLLLLHMSEEQAFDTLKFLMYDLGIRRQYRPDMISLQIQMYQLSRLLHDYHR
NLYTHLEEHEICPSLYAAPWFLTLFASQFPLGFVARIFDLLFVQGTEVIFKVALCLLSNH
EGEILECDCFESIVDYLKSTIPNLTHSQMEETINKATEMDISKQLHAYEVEYHVLQDELS
DAPPPSEESDRLDKLEKSNAQLKKQNMDLLEKLQAARLKIQTLESSVESFLSRESKMKHL
IRSLEQEKASYQKTIERMRSSLPSEAIAEVEMTQLKSSNNGKAKAACKKP
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggagggacaggatggcaaagggaataataataataatgacggtaatcaaaaggcagac
aagaggtttgcgctgtgttacatgggctggtcgtctctggacagccgaaccacgctgccc
atgctcccgtggctggtggcggagatccggaggaaaagtgagaagaacgagcccggaccc
gcacaggccagagaagtccagctgactctctcgccctctctgatccgctgcgtcccctca
aacagcagcaacccgtccgtgttcatattcgaacacaaagcacagtttatatccaggttt
atccacaatagccatgacttgtcttattttgcctaccttatcagaagtcaaccagagaac
ccagagtctgagatggcatgccatgtgttcaaagcatgcgatccaaatcaggtgcctgag
gttattagcagcattagacaggtgtccaaggctgcacttaaggaggaaagcaagcccaag
caagatagtgatgagtctttctacaactcccagaagtttgaagtactttactgtggaaaa
gtgactgtcaactacaagaaagcgccttcaactttaattgacgactgcattgataaattc
cgccaacacgagattgaacgcaagcgtctgcggctcctcagtggccagcgtagctccacc
gaagcccccgtagagttcatcatgggtgacgaccctcttagctcctccctctgcgaagtt
gacgaacccgaggcagaacatggctcgattgaggaagacctgtctgagttggcaaatggg
aaactggccttgaccaactcttccagtacaggcagcttgcgaggggcctttcctgagtgc
attttggaggactcgggatttggggagcagcaggagattcgtacgcgctgtaatagcctc
gcgggtggcctgcagaaaaagcccagagagactggcaaggggtcaacgcgtaggagacat
gctagcgcgcccaataacgtgcagcctactgatgctgacaagaatcgtacaatgctgttc
caggttggacggtttgaagtgaatctcatcagccctgaaaccaaaactgtggttctggag
aagaattttaaggacatctcatcctgttcccagggtgttaaacagacagatcactttggc
tttatttgtcgggatgtggaggtgtctggcccagcccagtatgtgtgttacgtgttccag
tgcgctagtgagtctctggtggatgaagtaatgctcaccctaaaacaagcctttaccaca
gcagcagctatgcagagctccaagaaccaaatcaaactgtgcgaggcttgtccaatgcac
gacttgcacaagctctgtgagagaattgaaggcttgtatcctcccagggcgaaactagcc
attcagaagtacctttcacaactgagcgacaacgagcaggtgaacatatttgaacgggtg
cagaaaatgaagccagcatctgatcaagaagaaaacgagcttgtgattcttcacctccga
cagttgtgtgagaccaagcagaaatctcatgttcatattggagaagtctcacagcagaat
gcttctggcagcactctgacctctgataactccactgcgggccgcaataaactagacttg
ttgaagaacaaagcccggagttctttgacgagctccctggagaacatcttatcacgggga
gccagccgtatgcgaatgcgtctgggcagtatgggaagctttgaccgcggcgactctcct
ggtgactccccacctgggactccacccagttaccttgaggacgacccagatgccccgcag
ttccgtcgccgggcacacaccttcagccacccgcccatcaagaagaagatctccttcact
gaggtttcatcccaggcctgtaaggctccactgcgccggcagcagtctttggccccagag
ctgctgcagagcagcactgttggtatctcaagagtgcgcagtgtctctgagagtgactcc
tacttcagtctctcgtcctccttccacacccccactttcctgaaaagcttttaccaaggc
tcccttggctcactggcctccctgtcggacagcgggagtcttaagagtggtaatggggag
ggcaggaagaggtctctgtcaggctgtagcaccgattctttgaccttggtgcctccacgc
agagtttcttggcgccagaagattttcctgagggtagcgtcacccatgaacaaaccctcc
gcctctatgcaaaacgtggaccacatggatggccgggagctgctgccactttctcctcgg
gctttgaaccaggatcaagactctcaggccagccctctgtccccagagcagggctttggt
ggagagaagtgccggcgttgcccagctgactacagggccctgtggaagaaagctatccac
caacagattttgctcatccgcatggagaaagagaaccagcgtctggaagccagccgtgat
gaattgcacattcgtaaaatgaagctggactacccggaagtgtgtccgtgctccaaagat
ttgctggccctgtgggacaaaaagttgagcagcccctgccgcactaaagtacagtgggac
aaagaagagatcaacagtgccgtctgccagggtgtccccaaaagtcggcgaggtgaggtg
tggctcctcctcttccagcagtatcgtctgcgtcaccgtctgccgcagcggcagcagtct
cctgaaacgccttatcaggatctcctcaagcagctcacagcacagcagcacgccatcctt
gtcgacctcggccggacattcccaacgcaccagtatttcagtgctcagctgggagctgga
cagctgtctctgtacaatctcctgaaggcctactccctgctggacacggaggtgggctac
tgccagggcatcagttttgtggccggtttgctactgttgcatatgagcgaggaacaggct
ttcgacaccctcaagttcctcatgtacgatctgggcattcgtcggcagtaccgtcccgac
atgatctccctgcagatccagatgtaccagttgtcccgtctgctgcatgactatcaccgt
aacctgtatactcacctggaggagcacgagatctgccccagcctgtacgccgcaccgtgg
ttcctcactctcttcgcctctcagttcccgctcggctttgttgcgcgcatatttgacctc
ctgtttgtccaaggcacagaggtgatctttaaggtggccttgtgtttgctgagcaaccac
gagggggagatactggagtgtgactgctttgaaagtattgtggactaccttaaatccacc
atccccaacctcactcacagccaaatggaagagacgatcaacaaggcgactgaaatggac
atctccaagcagctgcacgcatatgaagtggagtaccacgtcctgcaggatgagctgtca
gacgctcctcctccatcagaggagtctgataggctggataaactggagaaatccaatgcc
cagctcaagaaacagaacatggacttgctagagaaactgcaggcggctcgtttgaaaatt
cagacattggagagcagcgtggagagtttcctgtcacgagagagcaagatgaagcacctg
atccgctctctggaacaggagaaagcttcctaccagaagaccattgagcgcatgcgtagc
agtttgccatcagaagccatagccgaggtggagatgacacagctcaagtccagcaataat
gggaaagccaaagctgcctgtaaaaagccttga
DBGET
integrated database retrieval system
