KEGG   Pimephales promelas (fathead minnow): 120466888
Entry
120466888         CDS       T08155                                 
Symbol
rif1
Name
(RefSeq) LOW QUALITY PROTEIN: telomere-associated protein RIF1
  KO
K11138  telomere-associated protein RIF1
Organism
pprm  Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pprm03032]
    120466888 (rif1)
DNA replication proteins [BR:pprm03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    120466888 (rif1)
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 120466888
NCBI-ProteinID: XP_039511504
LinkDB
Position
Unknown
AA seq 2256 aa
MMAAVPLSSASLLPLLDCLEDEAAGLSEQTDAYITIANRLNGEEGRQFLPVVVKHFARLS
KILLVHISSENEELCQAALQALGFCVFHSHIVSVIPANISEDILSTLCNVVVKSKEKFTC
TRALWVISKQNFPPEVASKKAPEILKSLEALQTREVQSILIDHESLNVVIRLLEQAPTQM
AAGAVCWAKLVVPLVVHSANKVRLRAAAALELGMPLLLEKQQEVAAIVEPMMSSMLIPEM
QKLFASKNETNMLKLWPLFVKLLGKLLHKGGAFINSLLYLEELGFRNSSPNIKKIAFIAW
KSLIDNFALNPDILCSSKRLKLLMQPLSSIQVRTEALLLTKLEVWWYLVVKLGPNFSANF
EQVGVPLLHSTLPPDSPLQSPTTPARTPNPSNGTPNTPKTGIPSCSTTSTTPRMNLNSSM
QASQSYRSIQLLGLEMTLHWLLGPEVMATAAKESLQISLEPLTHPFLTSPSFFSRHASTL
ISAISDGFIAVGKHAPEALLNLIWSNLISSVRTAIEAGNKKERQGSEVLTLLLQALQSIL
SSDALPAERALLLLEATIKGIPQKVLGSAAYQVANMDLLNGTPALFLILLFYKSNQLSSF
LEDERFFSSLETLVSCGFCGPTSPLAFGEAVLGAVSGSAEVVKNKKQLWRMWSVVVNPLT
DTITQTNEVNQGDALEHNFSAIYSALMFPVFHLLPGSALPQITQKAMISTWSRLYKAFAR
CSALVATAEENICCEELCAKISASLESDALKSLPMLDAIANILLVIIESMDFSPYTPQFQ
QKMKSPHTPLSWVRKKSRALGNLSTFHTLLIQTLDAFLSVNPSEESVEPACGALNGIGLV
MVSILSTLLTNITLPTFLQEVLSTLTKPLSHLYEQFSSYDEPSKPSATLGHKLEKLATDL
LGCLQTQLTQHNDEMLGLLSPLLCVLFPHKSKQIRTVVTQFWNATFGNALTLTYPEPLKS
VLSQAKQKTLLILPGFGAIDAPDDCSGQYTGESSQLDTQISGVKMTSVGKRDSLLARADE
LKGRGSVHVAKPVSIKLDFGSPKPLRREAIEEAASVDFVFIPPETKQRVLTEHQKEVKRT
KRVDIPALYNNLDASQDTTDFSQCTQSQEESMDKLTKDDGDQPKEGDKVKRQFSNSGTAD
LIMCGICVHAFSYVLIGFNFVSSPKEIATSDEPSPDVKITQEGTRSDVETPEKSVQNKDQ
TLEKDQSPSNGITIEASGHEKSDLEGTSPNVSGSSDMISGTPPKPNSRRQSFITLEKYVE
GKSSPATVAFTGPLTRKSGRLDSSKESKYTPNDSQPQTTKEDSQESQKISSTDPSAQNEK
VGEEAKDEIKSMGDHPCEGTDEEGDVVPDTQTQVSSDASGVKSSPVSKASIEEDSPEKDS
QSLANSQSSQEPRRSSRRRSKPVRPGEDPGEMKSKEQVSQVADSMTNTHKSILTPASSTL
TGRRIKVREDRKVVGDLLKSKGMKGELSPSGLQIFSAESSQALPRVSQGETSHESSPVAQ
SDSQSGERLPTLSESKSLALGRSPKKTRTHDESTYKEADENSQNDSQNATSPSKKKHLQT
PLSDSEADGQQSPRTRRTRRSESQLLQTKEESSPTDSQTMTKMKGRAMRRKTAEEETDSS
RDVTSTVNAEELSASQDSSQGLGRYRTRRSKGLLAADNMESETPDSQEDGPRPKKRLRKP
PSNEVLPVATEPKVSEIVAEKEDANIQSEVSMEMSQDEVDPEASLEISVSETNELKKNKE
FPSSYSVSHEQFSSQKGAVDDKVETKLKTETDAELNTGTDTEEKEIISGKGEDEEANSSS
QAVSEDLKFGSLRKCPHTRGRGRGRRRSRSCNCFLNNQEVFSQGSDIQESKDLKNEQVPL
VVDTLYSKPEQSSPTSVLEESKSSPIVDLPVADVQPYSTLPAQLPCEVVSSESPITKLGV
IVSQLSEAEEEAQLELSNLRDESNNVFVKVQEVESNQLESSGCTDSPKHNKELDNPSVSQ
EPPQSSTPQDTSPSQGRPVEDAPICQEQLESSHVHQEDAVKESEDLAVPEPSGEKVVLLE
ESNGKELLDKNVGLIEKDEDTQIDNRALSADMQESSVPPQSSTSEACLDSPPKPKPLDAL
SGELEPGQSPSRNRSRAWSPSASPSTSILKKGQKRTCEEDTPSPLQKSRRVSFATPIYHQ
ELADDIDRRSPVIRTSSPRSKVLSGQSKYITTPTKGYSGLSPRNLRSPGSKSSKKCLISE
MSQEPRPIAKDCVYPALVGCSTPVEAVLPQISSNMW
NT seq 6771 nt   +upstreamnt  +downstreamnt
atgatggctgcagtacctctatctagtgctagcctcctacctcttctagattgtcttgag
gatgaagcagctggactgtcagagcagacagatgcctatatcaccatcgcaaaccgtctc
aatggagaggaagggcgtcagtttctgcctgtggttgtaaagcattttgcacgtcttagt
aaaatccttttggtacatatctccagtgagaatgaggagctgtgtcaagctgcactgcag
gctttgggattctgtgtcttccactcacacatcgtttcagtcataccagcaaatatttcc
gaagatattctgtctacactctgtaatgtcgtggtaaagtccaaggagaagtttacatgc
acacgagcattatgggtgatttcaaaacagaattttccgccagaggtggcatccaaaaag
gccccagagattctcaagagtctggaggccttgcagactcgagaggttcagtcaatcctc
attgaccatgagtccctcaatgttgttataaggttgctggagcaggctcccactcagatg
gctgctggagccgtgtgctgggccaagctggttgttcctctcgtggttcattcggccaat
aaagtgcgcttgcgtgcggcagcagcactggaattgggcatgcctcttcttctggagaaa
cagcaggaggtggcagccattgtagagccaatgatgtcctctatgctcatccctgaaatg
cagaagctgtttgcctctaagaatgaaacgaatatgctaaagctctggcccttgtttgtg
aaacttctggggaaattgctccacaaaggcggtgcttttattaattccttgctgtattta
gaggagctgggtttccgcaactcttcccctaatattaagaagattgccttcatagcttgg
aagagcctcattgacaattttgcccttaatccagatatcctgtgcagcagtaagcgtctg
aagctcctcatgcagccccttagttccatccaagtcaggactgaagctcttctgctcacc
aagctggaggtgtggtggtatctcgtagtcaagcttgggcccaacttctccgctaacttt
gagcaggttggtgtgcctctactacacagcacacttcctcctgattctccactgcagtcc
cccactacacctgctcgtacccctaacccaagcaatggcacccctaatacacctaaaaca
ggcattccctcctgcagcacgacgagcactactcctcgcatgaatctgaatagcagcatg
caggcgtctcagtcctaccgctccattcagctcctgggactagagatgactcttcactgg
ctcctgggtccagaggttatggccacagctgctaaagaaagtcttcaaatcagcttggag
cccttgacacacccgttcctcaccagcccgtccttcttcagcagacatgcctctaccctc
atatcagccatcagcgatggcttcattgctgtgggaaaacatgctccagaagcacttctt
aatctaatttggagcaacctgatcagttctgtcagaacagctatagaagccggtaacaag
aaggaacggcagggttcagaggtccttacgcttctcctacaggctcttcagtccatcttg
tcttcagatgctctgcctgctgaacgtgcactgcttttgttggaagccaccattaaagga
atccctcagaaggtgcttggttctgcagcttatcaagtggcaaacatggatttgttgaac
ggtacacctgcacttttcctaatactgctattttacaaaagtaaccagctttcatcgttt
cttgaagatgagaggtttttctctagcctggaaacccttgtgagctgtggattttgtgga
cctacatcgcccctggcatttggagaggctgttttaggagcggttagtgggagtgcagag
gttgtaaagaacaagaaacagctctggaggatgtggagtgtggtggtaaaccctctgacg
gacacaatcactcagaccaatgaagtgaatcaaggagatgctctggagcataacttcagc
gccatttacagtgcattgatgtttccagtctttcatctgcttcctggttcagccctaccc
caaatcactcagaaagccatgatcagtacttggtccaggctttacaaggcatttgctcgc
tgctccgctttggtagccacagctgaggagaatatatgctgtgaagagctgtgtgctaag
atatctgcctctcttgaaagcgatgctctgaaaagtctgcctatgctagatgcaatagca
aacatcttgctggtcatcattgagagtatggacttttctccttacacgccacaatttcaa
cagaagatgaaatctcctcatacacctttgagttgggtacgcaagaaaagcagagccctg
gggaatctctcgaccttccacactctcctgatccagactctagatgcatttctttctgtg
aacccctcagaagaatctgtggagcccgcctgtggagctttaaatggaattggcttggtg
atggtctccatcttgtctactcttttgactaatataacactgcccacgttcctacaagag
gtgctgtccaccctcaccaaaccactctcacacctttatgaacaattctccagttatgat
gaaccatcaaagcccagtgcaacacttggacacaagttagagaaactggccacagacctg
cttggctgccttcagacacaattgactcagcacaacgatgagatgcttggtctgttgtcg
cccttgctctgtgtgctttttccacacaagagcaagcaaattcgcactgtggtcactcag
ttctggaatgccacctttggaaatgcactcaccttgacttaccccgagcctctgaagtct
gtgttaagtcaggctaagcagaaaactctcttgattttacctggttttggagctatcgat
gcaccagatgattgcagtggacagtatactggtgagagttctcagctggacacacaaatt
agtggggtgaagatgacctctgtgggaaagagggactctctcctggcgagggcagacgag
cttaaaggaagaggctctgtacatgtagcaaagccagtgtctatcaagctggactttgga
tcgcccaagcctttgcgacgagaagctattgaggaggcggcatcagtagattttgttttc
attccacctgagacaaagcaaagagtgctgactgagcaccagaaagaggtcaaaaggact
aaacgggttgacattcctgctctctataataatctggatgcctcccaggacaccacagac
ttttcacagtgtactcagagtcaggaggagtcaatggacaaattgacaaaagatgatggg
gatcaacctaaagaaggggataaggtaaaacggcagttttcaaactctggcactgctgat
ttgattatgtgtgggatatgcgtgcatgctttctcttatgtgttaattggttttaatttt
gtttcctcccctaaggagattgccacaagtgatgaaccatccccagatgttaaaataacc
caagaaggaaccagatcagatgtagaaacaccagaaaaatctgtgcaaaataaagatcaa
actttagagaaggatcagtcgccatccaatggcatcacaattgaagcgagtgggcatgag
aaaagtgatctagaggggaccagccctaatgtttcgggttcatctgatatgatatcaggt
acacctcctaaacccaatagcagacgtcaatcattcataacattagagaaatatgttgaa
gggaaatcaagtccggcaactgttgcatttactggtccactcacccggaaatcaggtaga
ctggattcttcaaaggaatcgaagtacacgccaaatgactcacaacctcagactactaaa
gaggattctcaggaatctcaaaagatcagcagcactgacccatctgctcaaaatgagaaa
gttggggaagaggcaaaagatgagattaagtcaatgggagatcatccttgtgaaggtact
gatgaggaaggggatgtggtccctgacacccagacccaagtatctagtgatgcatctggt
gttaagagcagtcctgtgtccaaagccagcattgaggaagactctcctgaaaaagattca
caaagtcttgctaattctcaatctagtcaagaaccaagaaggtcgagtagacggcgaagt
aaacctgttcgcccaggggaagatcctggggagatgaaaagcaaagaacaagtcagtcag
gttgcagactcaatgacaaatacacataagtcaatacttacgccagcaagtagcacttta
actggaagacgaattaaggttcgggaagaccgtaaagttgtaggtgacctgctgaaaagt
aaagggatgaaaggagagcttagcccaagtggtttacagattttctctgcagagtcttca
caggcacttccacgagtaagtcaaggtgagacttctcacgaaagttcacctgtagcccag
tcagatagccaaagcggagagagactgccaactctcagtgagtctaaaagtctggcattg
ggtagatctccaaagaaaactagaacacatgacgaatccacatacaaggaggcagatgaa
aactctcaaaatgattctcaaaatgccacatccccttcgaaaaagaaacatttacagaca
cctctttctgattctgaggctgatggccagcaatctccacgaacgcgaagaacaagaaga
tctgaatctcaattactgcagaccaaagaagaatcgagtccgacagattcccaaacaatg
acaaagatgaagggaagagctatgaggaggaaaactgcagaagaagagacggactctagt
agagatgttacatcaactgtaaatgctgaggagttaagtgcaagccaagattcatctcaa
gggcttggtagatacagaactcgacgatctaaaggtttgttggctgccgacaatatggag
tctgaaacccctgatagccaagaagatgggccaaggcctaaaaagagactgcggaaaccc
ccgtcaaatgaggtgctaccagttgccacagaacctaaagtttctgagatagtggcagaa
aaggaggatgctaatattcaatcagaagtatcaatggagatgtcacaagatgaggtagat
cctgaagctagtttggaaatttcagttagtgagaccaatgaacttaagaaaaacaaagag
tttccttcctcttatagtgtatcacatgaacagttcagctctcaaaaaggagcagtagat
gacaaagttgagacaaaattgaaaactgaaactgatgcagaattaaatactggaactgat
accgaagaaaaggagattatcagcggtaagggagaggatgaagaagcaaattcatcttca
caggcggtatcagaagacttaaagtttggcagtttgcgtaagtgcccacataccagggga
cggggccgtggacgtaggcgatctagaagctgcaactgctttttaaacaaccaggaagtg
ttctcacagggcagtgacatccaagaatcaaaggatctgaaaaatgagcaggttccactt
gttgttgacaccctgtactctaaacctgagcagtcaagcccaacatccgtattggaggaa
agcaagagctcaccaattgtagatttaccagttgctgatgttcagccgtattcaaccttg
cctgctcaactcccatgtgaggttgtgtcttctgaaagccccattacaaagcttggtgta
attgtttctcagctgtctgaagcagaggaagaagcacagcttgaattatccaacctgagg
gatgaatcaaacaatgtgtttgtaaaagtccaggaggtagagtcaaatcagttggagagt
tctgggtgcacagacagtccaaagcacaacaaagaattagacaacccttcagtaagtcaa
gaaccaccccagagttcaacacctcaagacacctctccaagtcagggtcgcccagtggaa
gatgcacctatatgccaagagcaactagagtcttcccatgtccatcaggaggatgcagtg
aaggaaagtgaagaccttgctgttccagagccgagtggagaaaaggttgtgttgctagaa
gagtcaaatggcaaagaattgcttgacaagaatgttggtctcatcgagaaggatgaagac
actcagattgacaaccgggctctttctgctgatatgcaggagtcgtctgtaccacctcaa
agtagtacctctgaagcctgcttagattccccacccaagcctaaacctttagacgctctc
agtggtgagctagagcctggccagagcccgagcagaaaccgatctcgtgcctggtctcca
tcagcttctccatctaccagtattctgaagaagggacagaagagaacatgtgaagaagat
accccatcccccctccaaaagtctcgtcgagtgtcttttgcaactccaatttaccatcaa
gaactggctgatgatattgatcgacgtagtccggttattcgcacaagctcacctaggtca
aaagtcttgagtggacagtcgaagtatatcactacacccacaaaaggctattcaggtcta
agtccacgtaacctccgtagccctggatccaaaagctctaaaaaatgcctgatttcggaa
atgagccaggagccacgtcctattgctaaagattgtgtttatccagcacttgttggctgc
tctacccctgtagaggcagttttaccacagatatcctccaacatgtggtaa

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