Pimephales promelas (fathead minnow): 120466896
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Entry
120466896 CDS
T08155
Symbol
obsl1a
Name
(RefSeq) obscurin-like protein 1a
KO
K19574
obscurin-like protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120466896 (obsl1a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
120466896 (obsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_4
Ig_5
C2-set_2
Izumo-Ig
Receptor_2B4
VEGFR-1-like_Ig-like
fn3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
120466896
NCBI-ProteinID:
XP_039511514
LinkDB
All DBs
Position
Unknown
AA seq
2180 aa
AA seq
DB search
MDIFGGAPRVLGYPRPVLVKLGTDAVLKCQISGEPQPDVIWERKNEPILPEGRYRITQDG
KVYALYISGVTMEDSGQYICRATNNIGETYAAATLKVEEEPQELQQTQPPLQQNEVKVIP
PEKEIKTMIQQQDGVVQNADPFQDHKPRFLIKPLSLRVDRGEDAAFTCKLTGEPLPQVVW
EKDGKQLNEIYESAHYHVGQLDGGWFQLKIFRTRAPDGGVYMCKAVNKHGEVITGAVLLV
EAVPEQREGNMTNGYTNGHYSPQHSRAKHSKEPHLNVSKAKKFTVTEGKHAKFRCYVTGK
PKPEIIWKKNGENIFPSRRHLIFEDREGYYTLKVMYCKQQDAGLYICAASNALGNTLSAV
QLSVKEPAVRFKRTLQDAEVKERDVAVLECEVPEESISTAWYLEDQRLQPGYKYNMEQKG
TRRRLTIQNVGADDDGVYLCEMPDGGKTIAELAVKGTIVKKLPRRLEVMEGENAAFFVEV
EQDEMEICWFKDGLQLRETHQTIIKSFGKTHILVFVNTSYQDSGTVTFMAGRSTTSSKLR
VKTARHCPPICPVSVQMNTDSLNGAVLSWSPSPNLQNSTKSVYVLERQEVGSQEWQRCLT
TETGTSAEVLGDSVPCEGDYRFRISCVNKYGRSGHVEFPKVVHLVPGPKIKTPMTNAVVT
EGEDAVFSIELSANLIGTWFLNSQQLRDSERFSMTQSKNQHILRIHHVPNVYDGAEITFI
ATGVRDSAVLQIKVPEVKFLPLSEMDTKKSTEVGNPIVLYCEVSYPTATVQWFKDGQALH
VEEGLNIQSDGNMRRIVIQSAEYSHSGVYTCQSNNDMLTFNVNVEAPPVSFKEITQDERQ
KSAMELDPVVLTCELSRPDAPACWFKNGVAILQSENITIQSEGTMKRLIIRSAELEDAGM
YTCQAGDQSTSFSVNIKEPLVTIVDPKDDIHLERYVSEEIVLNCELSRSNGEAHWFKDGL
KLQECEDIRISAEGPYRRVTILCASKWDSGEYVCDTGGDSIFFQLIIKEAPVRIVSPSES
EVEVCILSSERLVLSCEISNAKAEVCWFCDGIEVDENDNLKLEDDGIYHRLVIPSATIND
SAEYVCETADDSVTFWVKIEEPPVKLSCSKDIGSITESIAGDPVVLELEVSRDNAKVCWM
KDGVKVEESSNITITENGLIRKLTINFPALEDSGIYTCNAIDDKIDFKVRITEAPIKILN
KDQIKNEHKVVLYDDAVLECELSAANGVVNWYKNGSPIEENERFCFEEEGAFRSLVILCA
ELQDSGEYILDAKDDTISFHVTVQEPLVKIIGNSGDHDYQEMVTGDNLILACEVSRANAP
VKWLFNDEPLVPDERTVIESHGTLRKLTLSSILLSDSGKYMCDAVDDKMITVVKVQEPPV
EFLNKEEVNLVTGYEAEAVTLTAMVSRPNAQVRWLKDWTPFSGERFHTASLGLTRTFTID
PLKKLDSGEYTCDANTDEMHFSLLVRDMRIKFVKPLVDTVAHKDGMITLCCELCKAKADV
QWKKDGVEIIPSRRFSIRANEAERSLTIHRITKEDAGEYACESKDDCTSARVRVELPRVV
EFLTELHNTTVMEGEDATFKCVVSPDDVQLVWLMDGQPIKPSDRFHIEQNSLCHTLIIRK
VQLLDSSRITAEAEGIISKASLKVQEAQVLFTRRMEAVMAEEFGEATLETEVSLESGEVQ
WMRQGVVIQPGPRHKLIQNGCKRILAISNLNLSDRGTYRCETLHDRAQVKLNVEPRKIVI
RKGLMDIETFERETASFEVELSHADVDGVWQKDGLRVKPNNNWRVSSNGLVHGLTLSNLT
LEDTGSIAFSAEGLRTIARLVVKETPVMIIKKLSDVRLEEESSVILECELSRPNVDVKWQ
KNGLELKSSKTLRIYSMGRKRCLQILESSISDSGLYTCEIGDLSTSCKLEVYEHELEIIT
GLEDLYIKEDQNAVFMCELSMEDMPGEWYKNGSRIRPTTTIKTRTEGTKHFLLICNVKAE
DSGEVKFVSKQVESVAYLEVEELPVSIVRPLRDRTALEKHRVILECTVSSPNCDVTWYKG
DEELESTEHMEMIQEGCYHKLVIHQVALEDEGTYSIEVGEHTCTAKLMVEAQSILVVKDI
EDVEVRAPETACFQCEVSVTLIKPPIWTLNGENLQSGPNIRIENQGTVHKLTLKNTSSDM
SGTVKFTTGKAKTSAKLTVL
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atggatatttttggaggtgctccacgtgttcttggttacccgcggccagttctggtgaaa
cttggaacagatgctgttcttaaatgtcagattagtggagaaccccaaccagatgtgatc
tgggagcggaaaaatgagcctattcttcctgagggtcgttaccgtattacccaagatgga
aaggtgtatgccctttacatttctggggtgacaatggaagattctgggcagtatatttgc
cgagccacgaacaatattggggaaacgtatgcagctgctacccttaaagtggaagaagag
ccccaagagctccagcaaacacagccacctctacaacaaaatgaagtaaaagtgattcca
ccagaaaaagaaatcaaaacgatgatacaacaacaggatggggtagtacagaatgcagac
ccatttcaagaccacaagcctcgttttcttatcaaacccctttctctaagagtagaccga
ggagaagatgctgctttcacctgcaagctgacaggtgagcctttgcctcaggtggtttgg
gagaaagatggtaaacagttgaatgaaatctatgagagtgcccactaccatgtgggccag
ctagatggtggctggttccagctgaagattttcagaacaagagccccagatggaggtgtc
tacatgtgcaaagcagtcaacaagcatggagaagtgataactggggcagtgctcctagta
gaggctgttccagaacaaagagagggaaacatgacaaatggctacaccaatggtcattac
tcaccacagcattcaagggccaaacactcaaaagagcctcacctaaatgtatcgaaagct
aagaagttcactgtcacagaaggcaaacatgccaaattccgttgctatgtcacaggaaag
cctaaaccagagattatatggaagaaaaatggagagaatattttcccgagtcgaagacat
ctcatttttgaggacagggagggatattacaccctaaaagtaatgtactgtaagcagcag
gatgccggactctacatatgtgctgcttcaaacgcactgggaaacacactgagtgccgtg
caactgtcagttaaagagcctgcagttcgatttaagcgaactctgcaagatgcagaggtc
aaggagagggatgttgctgttctggaatgtgaggttccagaagagtccatttctactgca
tggtacctggaggatcagaggctgcagccaggatataagtataacatggaacagaagggc
acacggagaagactaaccatacaaaatgttggggcagatgatgatggagtttatctgtgt
gagatgcctgatggtggaaagactattgcagaattggcagttaaaggtacaattgtaaag
aaacttccacggagattagaagtgatggaaggagagaatgcagcattctttgtggaggtg
gaacaagatgagatggaaatctgctggtttaaagatggactgcagttgcgagaaacacat
caaaccattatcaagtcttttggcaaaacccacatcctggtctttgtcaatacgtcatat
caagactctggcacagtcacctttatggcaggcagatcaacaacaagctccaaactcagg
gtcaaaactgctcgacactgccctcccatctgcccagtgagtgtccaaatgaacactgac
agtttaaatggtgctgtcctttcctggtcaccatcacccaacttgcaaaactccactaag
tcagtgtatgtgctagaacgacaagaagtaggctctcaggaatggcagcgatgcctgaca
acagaaacagggacatctgctgaagtcctgggtgacagtgtgccatgtgagggtgattac
cgtttccgtatctcctgtgttaataaatacggcagaagtggacatgtggagttcccaaaa
gtagtacatctggtcccaggtccaaagatcaaaacccccatgacgaacgctgtggtgact
gagggggaggatgctgtgttctccattgagctctctgctaacttgattggcacatggttt
ctgaatagccagcagctgcgggatagtgaacggttctccatgactcagtcaaagaaccaa
cacatcctacgaatccaccatgtgccaaatgtctatgatggagctgaaatcacctttatt
gcaactggcgtacgagattcagctgtgctacaaattaaagtacctgaggtgaaattctta
ccattgtcagagatggacaccaagaagagcactgaggtgggaaatcccattgttctatac
tgtgaggtgtcctaccccacagccactgttcaatggttcaaagacggacaagctctacat
gtagaggagggtctgaatatccaatcagatggcaacatgaggaggattgtcattcaatca
gcagagtactctcattctggcgtgtacacctgccaatcaaacaatgacatgctcacattt
aatgtgaatgttgaagctccccctgtgtcatttaaagagattacgcaggatgagaggcag
aaaagcgctatggaactggaccctgtggtcctgacatgtgaactttcccggccagatgca
ccagcctgctggtttaaaaatggagttgcgattcttcagtcagaaaacatcaccatccag
tcggaaggcaccatgaaaagacttataattcgttcagcagagctggaagacgctgggatg
tatacttgccaagcaggcgatcaatccacgtcattttctgtcaacataaaagaacctctg
gttacaattgtggacccaaaagatgacatacatttggagcgttatgtctccgaggagata
gtcctgaactgtgagctctctcgatctaatggagaagctcactggtttaaagatggccta
aaactccaagaatgtgaggatatccgaatcagtgctgaaggcccgtacaggagggtaacc
attctctgtgcttccaaatgggattcaggagagtatgtatgtgacacaggaggtgactcg
attttctttcagctcattattaaggaggctccagtccgcatcgtgtctcccagtgagtca
gaggtagaggtgtgtatactgagctctgagagactggtcctgagctgtgagatctcaaat
gcaaaagcagaggtctgctggttctgtgatggcattgaggtggatgagaatgataacctg
aaactggaggatgatgggatttaccacaggctggtaattccctctgctacaataaacgat
tcggcggaatacgtgtgcgagactgcagatgactctgtcacattttgggtgaaaatagaa
gagccccctgttaaactgtcttgctccaaggacataggtagcattacagagagtattgct
ggggatcctgtagtcctagagcttgaggtttctcgtgataatgcaaaggtgtgctggatg
aaagatggagtaaaggtggaagagagcagcaacatcacaattactgagaatggcctcata
cgcaagctaactatcaattttccagctctggaggattctgggatatacacctgcaatgcc
attgatgacaaaattgattttaaagtcagaattactgaggcaccaataaaaatcctgaat
aaagatcagatcaagaatgagcacaaggttgttttatatgatgacgctgtactggagtgt
gagctgtctgcagccaatggtgtagtcaattggtataaaaatggcagccctattgaggag
aatgagcgcttttgttttgaggaggaaggggcattcagatccctggtcattctctgtgca
gagttgcaggactctggagaatatatccttgatgctaaagatgatacaatttcatttcat
gtcactgtacaagagccattagtgaagatcatcggcaattctggtgatcatgattatcag
gagatggtgacaggagataacctcatcttggcttgtgaagtttctcgagctaacgcacca
gtaaagtggctattcaatgatgaaccactggtccctgatgagcgcacggttatcgaaagc
cacggaacactccggaaactgacattatccagcatcctcctttctgactctggaaaatac
atgtgtgatgctgttgatgacaaaatgataactgttgttaaagttcaagagcctcccgtt
gagttccttaacaaagaagaggtgaacttggtcactggttatgaagcagaggctgtcact
cttactgccatggtttccagacctaatgcacaagtgcggtggcttaaagactggactcca
ttcagtggagaacgtttccacacagccagcctgggcctgacccgcactttcaccattgac
ccattaaagaagctcgacagtggagagtacacatgtgatgcaaacacggatgagatgcac
ttcagtctcctggtcagagatatgcgtattaaatttgtgaagccgctggttgacacagtg
gcccataaagatggtatgatcacactttgctgtgagctatgcaaagctaaagcagatgtc
cagtggaagaaggatggagtggagatcatacccagccgtcgcttctctatccgtgccaac
gaggcggaaaggagtctcacaatccatcgtatcaccaaagaagatgccggagagtatgct
tgtgagtccaaagatgactgcaccagcgccagagtaagggtggaattgcctcgtgtggtg
gaattcctcacagagcttcacaataccacagtcatggagggtgaggatgctacctttaag
tgtgtggtctcccctgatgatgttcagcttgtctggctcatggatggacagcccatcaaa
cccagtgatcgcttccatattgaacaaaacagcctctgccatactctgattatccggaag
gtccagctgctggattcatcccggatcactgcagaggctgagggcatcatttctaaagcc
agtctcaaggtccaggaggcgcaggtcttgtttacaaggagaatggaggcagtgatggct
gaggagtttggcgaggctacattagagacagaagtgagtctggagtctggagaggtgcag
tggatgagacagggggtggtgatccagccaggacccagacataaactcatccagaatggc
tgtaaacgtatcttggccatcagtaacctcaatctgtctgatcgagggacataccgctgt
gagaccctccatgaccgtgcgcaggtcaagctcaatgtggagccgaggaagattgtcata
cgcaaggggctgatggacattgaaacatttgagagagagacagcgtctttcgaggtggaa
ctttctcatgctgatgtggacggtgtgtggcaaaaagatggtctgcgtgtcaaacccaat
aacaactggcgtgttagttccaatggactagtacatggcctcactctctccaacctcaca
ttagaggacacgggtagcattgccttctctgcagaaggtctgagaactattgccagactg
gtagtcaaagaaacaccagtaatgatcattaagaagctgtctgatgtcagacttgaagag
gaatcttcagtcattttggagtgtgagctgtctagaccaaatgtggatgttaaatggcag
aagaatgggttggagctgaaatccagtaagactttaaggatttattccatgggccgcaag
cgctgtttacagattttggaatccagcatcagtgactcgggcctttatacttgtgaaata
ggtgatctcagcacttcctgtaaacttgaggtctatgaacatgaattagagatcataact
ggcttggaggatctttatattaaggaggaccagaatgctgtttttatgtgtgagctgtct
atggaagatatgcctggggaatggtacaaaaatggcagcaggatacgtcccactaccacc
atcaagactcgtacagagggcacaaaacacttcctgcttatatgcaacgtcaaggctgaa
gattctggagaagtcaagtttgtttccaaacaagtggagtcagttgcttatcttgaagtt
gaagagcttcctgttagcattgtccgtcccctcagagatcgaacagctcttgaaaagcat
cgagtcattctagaatgcactgtatcatcaccaaattgtgacgtcacctggtacaaaggg
gatgaagagttagaatccactgaacacatggagatgatacaagaaggctgttaccataaa
cttgttatccaccaggtggcattggaggatgaaggaacttacagtattgaggttggggag
cacacatgcacagccaagctaatggttgaagcccagtctatcctagtggtgaaggatata
gaggatgtggaagtgagagctcctgaaacagcttgcttccagtgtgaagtgtccgtgacc
ctcatcaagcctcctatctggacattaaatggggagaacctgcagtctgggcccaatatt
cgaatcgagaaccaagggactgtccacaaactgacactcaaaaacaccagctctgacatg
agtgggacagtcaagtttacaacagggaaagccaagactagtgccaaactgacagtgctt
tag
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integrated database retrieval system
