Pimephales promelas (fathead minnow): 120467031
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Entry
120467031 CDS
T08155
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A isoform X1
KO
K10523
speckle-type POZ protein
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120467031 (spopla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120467031 (spopla)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120467031 (spopla)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
120467031
NCBI-ProteinID:
XP_039511709
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MARKGQVVKALGPSALLAVRSELAMSGVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMW
TINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKS
EVRAKFKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLT
LFCEVSVVQDSVNISGQSNMNTLKVPECQLSDDLGNLWECSRFTDCALYVGGQEFKAHKS
ILAARSPVFNAMFEHEMEESKKNRVDISDVEPEVFKEMMGFIYTGKAPNLERMADSLLAA
ADKYALERLKVMCEEALCNSLSVENVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGC
KDGKNWNSNHATDIMETAGWKSMIQSHPHLVAEAFRALASAQCPHFGLPRKRLKQS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaaaggtcaagtggtgaaagctttgggaccgtcagcgcttcttgcagtgagg
agtgagctggcgatgtcaggggtcccaacccctcctcctccaggggagatgtccagtggg
cctgtggcagagagctggtgctatacccaggtcaaggtagtgaaattttcctacatgtgg
accataaacaacttcagcttctgtcgagaagagatgggtgaagttttaaagagctctacc
ttctcatcagggcctaatgataagatgaaatggtgcttgcgggtcaatccgaagggactc
gatgatgaaagtaaagattatctttcgctatatttgctattagttagttgtccaaaaagt
gaggtcagagccaagttcaaattttctttattgaacgctaaacgggaggagacaaaagct
atggaaagccaaagagcctatcggtttgtccaaggcaaagactggggcttcaaaaaattt
attaggagagattttcttctcgatgaagcaaatgggctgctaccagatgataaactcaca
ttattttgtgaggtaagtgttgtccaggactccgtgaacatttccggacagtccaatatg
aacacgttgaaggttccggagtgccagctgtctgatgacctgggtaacttgtgggaatgc
tcacgcttcacggactgcgctctatatgtgggggggcaggagttcaaagcccacaaatcc
atcctggcagcgagatcaccggtctttaatgccatgtttgaacatgaaatggaggagagt
aaaaagaatcgagtggacatcagtgatgttgaaccagaggtttttaaagaaatgatgggc
ttcatatacacaggaaaagcaccaaatttagagagaatggctgatagtttattagccgca
gctgacaaatacgctctggagcgcttaaaggtcatgtgtgaggaagccctttgcaacagc
ctctcggttgaaaacgtggcagacaccctcatcctggccgacttgcacagcgccgagcag
ctcaaagcacaggccatagattttatcaacaggtgcagtgtcctccgacagctgggctgt
aaagatgggaaaaactggaatagcaatcatgccacggacataatggagaccgcaggctgg
aagtcaatgatccagtctcatcctcacttagtggcggaggctttccgtgcgcttgcgtca
gcacagtgcccccacttcggcttgcccaggaagcgcctaaaacagtcgtga
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