Pimephales promelas (fathead minnow): 120467213
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Entry
120467213 CDS
T08155
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120467213 (sorcs2)
Membrane trafficking [BR:
pprm04131
]
Protein recycling
Others
Others
120467213 (sorcs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
DUF6786
Motif
Other DBs
NCBI-GeneID:
120467213
NCBI-ProteinID:
XP_039511960
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MKTLIMAVLAHLYPAVFFACAWMSLFGFGPISCHSGVIQQINERDRELDSRGGHVIGRDE
TLISAHSRGDYSGDPGGPAMGVPRVRRASTPEKVSLLSSSFVLKGDATHNQAMVHWTGEN
SSVILILTKYFHADSNKVLESSVWRSSDYGSTYTKLNLMPGTTIIVTNFYICPTNKKKVI
LVSSSINERDQMLFISTDEGSSFQRQPVSFTVETLLFHPSEEDKLLAYSKEAKLYISTDL
GHKWTLLQERVTKDRVFWAVTGVDVDPDLVHMEIQDIGGGYLYVTCLIQNCSDKMVTAQF
LGKIDHTSLSVQDEYIFVKVTTGNRTKYYVSYRRNEFVQMRFPKYSLPKDVQIVSTDENQ
VFLALQEWYQTDTYNLYQSDHQGVYYSIVLENVRSTKQPEENVLIDILEVRGIKGVFLAN
QKVDGKVTTLITYNKGRDWEPLAPPTTDMNGKPVSCKQPDCHLHLHLRWADNPYVSGTVH
TKDSAPGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKD
TSIPLKILKFSIDEGQTWSVHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVK
VDFRQSFPRQCTEADYDCWKLTDLQGEKCIMGQERLYRRRKETSFCIKGKSYTSALTANP
CQCSEKDFACDYGFERAPSLRLEGDRCYPDFWHDPDAPPENCHLGHSYKSSTGYRKVIAN
VCEGGLNKEQSAKQHSCPLLPPKGLQLGIKGQMLAVAPGDDITFIVHQEQGDTISTRYQV
DLMDGVRAIYENLTVIDEPIQHRYEKPGVYRVNVKAENSAGHDQASLYIQVTDPLQDVHL
QVVPIAGRNQEVNLTAIVQPPEANLTVFYWWIGDNLQPKLTLENSLITRFSEEGEVPVTV
QASNGRSMVQDSKTVIVYDHFQVIPLSFSRNLDRFNPNIPEWRQDVGQVVTTILAKLAGV
PQDTLVTMVKPGLPTTADLYVLPPVSTPVKRSVFVDKRVPTIKQVLSENNVSFIVRGGLR
VLVTLASSDSATQMPSSTQGSRLAAAGPGVWALAVFLLISLISAAAFILFKFKRKNYKNH
GSLLRPEESSLTRPWLRFRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQNIIQDEEFIDD
DLDSQTLGNTGGNHSGVVLSINSRELHSYLTS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctcatcatggcagttttggcgcacctgtacccagctgtgtttttcgcctgc
gcgtggatgtcactgttcggattcggaccgatttcatgtcacagtggcgttatacagcag
ataaacgagcgggaccgagagcttgacagccgcggtgggcatgtcattggcagagatgaa
acgcttatctcggcgcacagccgcggagattacagcggggacccgggcggaccggccatg
ggagttccccgagtccggagggcatcgactccggagaaagtctctctactcagcagctct
ttcgtccttaaaggggatgccacccacaaccaggcaatggtccactggacgggtgaaaat
agcagtgtcatcctcattctcactaaatatttccatgcagactccaacaaagttcttgag
agttccgtctggagatccagtgattatgggtcaacctacaccaagctcaacctgatgcca
ggcacaaccatcatagtcacaaacttctacatttgtcccaccaacaagaaaaaggtgatc
ttggtgagctccagcatcaatgaacgtgatcagatgctcttcatcagcacagatgagggt
tcatcctttcaacggcagcctgtctccttcaccgtggaaacactcctcttccatccatct
gaggaagacaaacttttggcttacagcaaggaggcaaagctgtacatctccaccgatctg
ggtcacaaatggactctgctacaggagcgtgttactaaagacagagttttctgggctgtg
acgggggtggatgtggatcctgatttggttcatatggagattcaagacatcggcggtgga
tacctttatgtgacgtgtctcatccaaaactgctctgataaaatggtgacagcacagttc
ttggggaagattgatcacacttccctctcagtgcaagatgaatacatatttgttaaggta
actacaggaaatcgcaccaagtattatgtctcataccggaggaatgaatttgttcaaatg
agattccctaaatactctcttccaaaggatgtgcaaatcgtgagtacagatgagaatcag
gtattcctggctcttcaggagtggtatcagacagacacgtacaacctctaccagtcagat
catcagggtgtctattactccatcgtgttggagaacgtccgcagcactaagcagcctgaa
gagaatgtcctcatcgacatcctggaggttcgtggcatcaagggtgtattcttagccaat
caaaaagtagatggaaaagtgacaactcttatcacctacaacaaaggcagagactgggaa
ccactggctcctcctacaactgatatgaacggcaaacctgtcagttgcaagcagcctgac
tgtcatctccatctccacttgcgctgggctgacaacccgtacgtatctggaaccgtccac
actaaagattctgccccaggcctcataatgggtgcaggtaaccttgggtctcaactagtt
gaatataaagaagagatgtatatcacctcagactgtggcaagacctggagacaggttttc
gaagaagagcatcacattctctatctggatcatggcggtgtcattgtggccattaaggac
acttcaatccctttaaaaatactcaaattcagcatagatgagggacaaacatggagcgtc
cacaacttcaccagcacatcagtgtttgtggatggacttttgagtgaacctggagatgag
acactggttatgacggtatttggccacataagttaccgttcggattgggagctggtgaag
gtggatttccgtcaatcgtttcccagacagtgcacagaagctgattatgactgctggaaa
ctcactgacctacagggagagaaatgcatcatgggccaggaacgattgtacaggaggagg
aaagagacatcgttctgcattaaagggaagagctatacatcagctctaaccgctaaccct
tgccagtgctcagagaaagactttgcctgcgactacggctttgagcgagctcccagcctc
aggttagagggggatcgctgctatcctgacttttggcatgatcctgacgctccacctgaa
aactgccatttaggacacagctataagtccagcacaggttaccggaaggtcatcgctaat
gtttgtgagggtggcttgaataaagaacagagcgcaaagcagcattcctgccctctgctg
ccccctaaaggcctgcagctgggcatcaaaggacagatgttggccgtggcacctggtgat
gacatcacctttatagtgcatcaggaacagggtgacaccatcagcaccagatatcaggta
gatttaatggatggggtcagggctatatatgaaaacctgactgtcatcgacgaacccatt
cagcaccgctatgagaagccaggtgtttaccgtgtgaatgtgaaggctgaaaactctgct
ggacacgaccaagcctcactttacattcaggtcacagatcctctacaggatgtccatctg
caggtggtcccgatcgctggcagaaatcaagaagtaaatctcacagctatagtgcagccc
cccgaggcaaaccttaccgtgttttactggtggattggagataaccttcagccaaagctg
accctggagaacagcctgattacaaggttctctgaggagggagaagttcctgtgacagtt
caggcttctaatggtcgctccatggtgcaggacagcaagactgtcattgtttacgatcat
ttccaggtcataccattgagtttcagtcgcaatttggaccgctttaacccaaacatccct
gaatggagacaagatgtgggacaagtcgtaaccacaattcttgctaagctcgcgggggtt
cctcaggacactttggttaccatggtaaagcctggtcttcccaccactgcagacctgtat
gttctgcctccagtcagcacaccagtgaagaggagtgtgtttgtggataagcgtgttccc
accataaagcaggttctgagtgagaacaatgtgagcttcattgtgagaggagggttacgt
gtgttggtgactctggcatcctctgattcagccacacaaatgccttcatccacacaaggt
tctcgtctggccgcagcaggtccaggtgtttgggctctcgctgtttttctcctcataagc
ttgatctctgctgcagcattcatactcttcaagtttaaaaggaaaaactacaaaaaccat
ggttccttgctgaggccagaggagagcagcctaacgcgtccctggctgcgtttcagaaaa
ctgccagggcgaaacgtctacgcccagatgcacaatgagaaggagcaggaaatgaccagc
cctgtcaatcacagtgaggacacgcagaatatcattcaagacgaggagttcattgatgac
gaccttgactcgcagacactaggtaacactggaggcaaccactcaggagtggtgttgagc
ataaactcaagggagctgcacagttacctgaccagctga
DBGET
integrated database retrieval system
