Pimephales promelas (fathead minnow): 120467220
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Entry
120467220 CDS
T08155
Symbol
si:dkey-237i9.8
Name
(RefSeq) LOW QUALITY PROTEIN: platelet endothelial cell adhesion molecule
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04148
Efferocytosis
pprm04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120467220 (si:dkey-237i9.8)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120467220 (si:dkey-237i9.8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pprm04090
]
120467220 (si:dkey-237i9.8)
00536 Glycosaminoglycan binding proteins [BR:
pprm00536
]
120467220 (si:dkey-237i9.8)
04091 Lectins [BR:
pprm04091
]
120467220 (si:dkey-237i9.8)
CD molecules [BR:
pprm04090
]
Proteins
120467220 (si:dkey-237i9.8)
Glycosaminoglycan binding proteins [BR:
pprm00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
120467220 (si:dkey-237i9.8)
Lectins [BR:
pprm04091
]
I-type lectins (Siglecs)
120467220 (si:dkey-237i9.8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
Ig_C17orf99
ig
I-set
Zwei_Ig_N
F59B103_C
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
120467220
NCBI-ProteinID:
XP_039511968
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MQVKIQPSLRMGTILLLFLFISEEACAEIIMKSVELFIQPRNEVQRSTNVSLKCQAKASH
TSGSHLNYKYIFYKDDRIITDQTNAMDSLYIPDARVIHSGRYKCAVVIEEIKKESGAKHL
TVKGLLEPVLTVDKLRLTEGDNVTAVCTADGETGYLMFFFRDGPEELGRKDSNSTHKVEL
NLTVYKGTVNMFCYYSINLGSRVERSNNSNVISVDIEELEIKPDITVMPYTDVTEGDNIT
FSCSVNMTHQRNSELRIIFSHGHNLLSLNMTHEDYAMLAKVNDSGEYECISILGGVQKSS
SLNITVKEIFSIPSLSIHPGEVFEGEHFDIRCQISSLASRIQREDIKYSIFRDDTFVIKD
NRYSGTASKATNGKYVCKAEANGIIKESSMLRFGAKVLVSKPEITVDGPVIVGKAFWIRC
HSENGSLPITYSLKSNNFIRNWTKVSRFQEEARFSALISTPSEITSYMCEAKNNDVSVKM
SERLQVTVIVPVGKPLLTVLPVPENIEEGNDVTLICGIAKGSPPISFRFYGSDHTEIHTT
TVQSNSSSFVLSTVKRKNSGNYYCEAFNTADMSSRSDIVKVKVSLAMWKKALIAVFCMLL
VALLVLFIVMRYKAKRGKREMAAKLSVKPASPKSDDSLTLSLTHDPHYNTHTVEMNYKES
VWSERPPDLADQDSLQSPNEGDVEYTVVVHPQPVDPTKIPLRKGTETVYSELQTSQGAPQ
NINHVTCXNMLNSTMIFLNQWTSRSQSPQASLTSLWNTVVCVSSISSILQHYSPKKH
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgaagatccagccctctctaaggatgggcaccattctcctcctctttctcttc
atctcagaggaagcctgtgcagagatcataatgaaaagtgtggaactttttattcagccc
aggaatgaagttcaaagaagtacaaatgtgtcactgaaatgccaggcaaaagctagccac
acctcagggtctcacctcaactataaatacatattctacaaagatgatcgcataattact
gaccagaccaacgctatggactctctctatataccagatgccagagtgattcactctggc
agatacaaatgtgcagttgtcatcgaggagataaagaaggagagcggtgccaaacacctg
acagtgaaaggtcttctggaaccagtcctaacagtggataaactgagattgacagaagga
gataatgttactgctgtctgtacagcagatggagaaacaggttatttgatgtttttcttt
agagatggacctgaggaactcggccggaaggactccaatagcactcacaaagttgagctg
aacctgaccgtttataagggaactgtgaatatgttttgctactattccattaatcttggt
agcagagtagaaagatcaaacaacagtaatgtgattagtgttgacattgaagagctggag
atcaaacccgatattacagtcatgccatacacagatgtcactgaaggagataacataacc
ttcagttgcagtgtgaatatgactcaccagagaaactcagaactcagaatcattttcagc
catggacacaatttgcttagtttgaacatgacacatgaagattatgctatgttggctaag
gttaatgactctggagaatatgagtgcatttcaatcctcggtggtgttcaaaaatcctcc
tctttgaacatcactgtaaaagagattttctctataccttccctgagcattcatcctggt
gaggtatttgaaggagaacactttgacattagatgccaaatcagcagccttgcctcaaga
attcaaagggaggatataaagtattcaatatttagagacgacacatttgtaataaaggat
aacagatacagtggcactgcaagcaaagcgactaatgggaaatatgtgtgtaaggctgaa
gccaatgggattatcaaagagagctcaatgctgcggtttggagcaaaagtgcttgtttca
aagcctgagatcacagttgatggtcctgttatcgtgggaaaggcattttggatccgttgc
cactctgagaatggaagtctgccaattacctactctctgaagagtaacaactttattcgg
aactggaccaaggtgtctcgctttcaagaggaggctcgtttctcagccttgatatcaact
ccttcagagattactagttacatgtgtgaagcaaagaataatgatgtctcagtcaagatg
agtgaaaggctacaggtgactgtaatagttccagtaggaaagcccttacttacagtcctt
ccagttcctgaaaacattgaagagggcaatgatgttaccctgatatgtggcattgcaaaa
ggctctccaccaatcagttttaggttttatggcagcgatcacacagaaattcacaccaca
acagttcagagtaattcatcctcatttgtcctgagtacagtgaaaaggaaaaacagtgga
aattactactgtgaggcatttaacacggcagacatgtcaagcaggagtgacattgtcaag
gtcaaagtgagcctggcaatgtggaaaaaggctttgattgctgtgttctgcatgctgtta
gtggctctactggtccttttcattgtgatgcgctacaaggccaagcgaggtaaaagagag
atggctgccaaactatcggtaaaacctgcaagtcctaaatcagatgactctctaacactg
agtctcacccatgacccccattataatacccacacagtggagatgaattacaaagagagt
gtttggagtgaaagacctccagatttagctgatcaggacagcctgcagtcaccaaatgaa
ggtgacgtggagtacacagttgtggttcatcctcaacctgtagatcctacaaaaattcct
ctgagaaaaggcacagagactgtatatagtgagcttcagacctctcaaggggcacctcag
aatattaaccatgtaacctgttagaatatgctgaactcaaccatgatcttcctgaaccag
tggactagcagaagtcagtcacctcaagcatccctcacatcactctggaatactgttgtc
tgtgtttcatcaatctcttctatccttcaacattattctcctaaaaaacactaa
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