KEGG   Pimephales promelas (fathead minnow): 120467809
Entry
120467809         CDS       T08155                                 
Symbol
wdr48a
Name
(RefSeq) WD repeat-containing protein 48a isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    120467809 (wdr48a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pprm03400]
    120467809 (wdr48a)
DNA repair and recombination proteins [BR:pprm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     120467809 (wdr48a)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Vps41 WD40_RFWD3 WD_LRWD1 WDR54 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 120467809
NCBI-ProteinID: XP_039512249
LinkDB
Position
Unknown
AA seq 691 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTRSLKRTNADVSSSTTSSLSG
NKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHSDNVKSLLLNRDGTQCL
SGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDI
RVLICEEKAPVLKMELDRSADPHSAIWVSTTKSTVNKWSLKGIHNFRASGDYDNDCSTPL
TPLYTQPEQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKMEFDEE
IKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLL
LQALLEYWPRTHVNPMDEESELNHGSVNGEHESRIQKGNGYFQVPPHTPVIFGEAGGRTL
FRLLCRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRL
SASDMLQVRKVMEHVYEKIINLDSESQTGGSTGEKPSEQKEEEDMAVLAEEKIELLCQDQ
VLDPNMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacaggcagaatgcagcggggcgcaggaaagtgcaggtgtcctatgtg
atcagagacgaggtggagaaatataatcgtaatggagtcaacgcactacagctggatcca
gctcttaaccggctcttcaccgccggacgagactccatcatcaggatatggagcgtcaac
cagcacaagcaggatccgtacattgcatcgatggagcaccacacggactgggtcaatgac
atcgtcctgtgctgcaacgggaaaacactgatctcggcgtcctcggacaccacagtgaag
gtctggaacgcacacaagggcttctgcatgtcaacgctgcgaacgcacaaggattatgtg
aaggcgttggcgtatgctaaagacaaagagctggtggcttcggccgggctggaccgacag
atcttcctctgggacgtgaacacactcacagcactgaccgcatccaataacactgtcact
aggtcgctgaaaaggacaaatgcagatgtttcttcatctacaacgtcttctctcagcggg
aacaaggactccatctacagcttggccatgaatcagatggggacggtcatagtgtcgggg
tccactgaaaaggttctgagagtgtgggacccgcggacctgtgccaaactaatgaaactg
aagggacattcagacaacgtcaaatcactgctgctaaacagagatggaactcagtgtctt
tcaggaagctctgacgggacgatccggctgtggtctctgggtcagcagaggtgtatcgcc
acataccgcgttcatgatgagggcgtctgggcgctgcaggtcaacgaggccttcacacac
gtttattccgggggtcgcgaccgcaagatctactgcacagacctgcgcaatcctgacatc
cgggtgctgatctgtgaggagaaagcgcctgtgctgaagatggagctggacaggtcagct
gatccgcattcggccatctgggtttccaccacgaagtccacggttaataaatggtctctg
aagggaatccataatttccgagcgtctggagattatgataacgactgcagcacgccgctg
acgccactgtacacgcagcccgaacaggttatcaaaggtggcgccagtataattcagtgc
cacattctgaatgacaaaagacacattctgaccaaagacaccaacaataatgtggcgtac
tgggatgtgcttaaggcttgtaaagttgaagacttggggaagatggagtttgatgaagag
atcaagaaaaggttcaagatggtttatgtgccgaactggttttcagtggatctgaagacg
gggatgttgacgataacgctggacgagagcgactgttttgcggcctgggtttctgctaaa
gacgctggattctccagtcctgacggatccgaccctaaactgaatctgggcggccttctg
cttcaggctctgctggagtactggcctcgcacacacgtcaaccccatggacgaggagagc
gagctgaatcatgggagcgtgaacggtgaacacgagagccggatacagaaaggaaacgga
tactttcaggtgccgccacacactccggtgatcttcggggaagcaggaggaaggacatta
ttcaggctgttgtgtcgagactccggtggagaaactgagtccatgttactcaacgagacg
gtcccacagtgggtcatcgacatcacagtggacaaaaacatgcccaaattcaacaaaatc
ccattctacctccaaccacattcatcgtccggagcaaagacgttaaagaaggatcggttg
tcggccagtgacatgttacaggtgaggaaggtgatggaacatgtgtatgagaagatcatt
aacctggacagcgagtctcagacgggcggttcgaccggagagaagcctagcgaacagaag
gaggaggaggacatggcggtgctagcggaggagaagatcgagctgctctgtcaggaccag
gttctggaccccaacatggacctgcggacggtgaagcacttcatctggaagagcggcggc
gacctgacgcttcattaccggcagaaatccacgtga

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