Pimephales promelas (fathead minnow): 120467857
Help
Entry
120467857 CDS
T08155
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120467857 (sox19b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120467857 (sox19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120467857
NCBI-ProteinID:
XP_039512351
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MMYSMMEHELKTAGQPHPHTNSPGMPPPVSGVGTAHHGSKTSCPPGGDPMDKVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKEYPDY
KYKPRRKTKALMKKDNHVGKYPLAPGNLLASAVAQGQSGSPRMDGYGWGHAGGYMGMQGE
ALGYPQQLHRYDLSALQYPPAQTYMNGASPYSQMSYSGSPQQPSPVMSMVKPEPLSHSPT
GVPNHHRGAFQGDLRDMISMYIPGGDTSDSSNQRAYPGVQQHYLGGTVPLTHI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatagcatgatggagcatgaactgaagaccgcgggtcaacctcatccccacacg
aacagtccaggaatgcctcctccggtcagcggggttggaactgcgcaccacgggtcaaaa
acttcttgtccaccgggcggggatcctatggacaaagtgaagcgccctatgaatgcgttt
atggtgtggtctcgtggtcagcggaggaagatggcacaggagaaccccaaaatgcacaac
tctgagataagcaaacgcctcggagcggaatggaaacttttaacggacgcggagaagcga
ccgttcatcgacgaggccaaacgtttgcgggctgtacacatgaaggaataccccgattac
aaatacaaacctcggcgtaagaccaaagctctcatgaagaaggacaatcacgtcggcaaa
tatcctctcgcacccggcaacctgttggcttcagccgtggcacagggacaaagtggcagc
ccgagaatggacggttatggctggggtcacgccggtggttatatgggcatgcagggcgag
gcactcggatacccacagcaactgcaccgctacgacctgtcagctctccaatacccgccg
gcacagacgtacatgaatggcgccagtccttacagccaaatgtcctatagtggcagccct
cagcagcccagtccagtgatgtctatggttaaaccagaacccctatcccattcacctact
ggagtaccaaaccaccaccgtggcgctttccaaggggacctgagggacatgattagcatg
tacattccaggtggggataccagcgatagctcaaaccagagggcctaccctggtgtccaa
cagcactatctaggtggaactgttcccctcactcatatctga
DBGET
integrated database retrieval system