Pimephales promelas (fathead minnow): 120467877
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Entry
120467877 CDS
T08155
Symbol
atl1
Name
(RefSeq) atlastin-1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120467877 (atl1)
Membrane trafficking [BR:
pprm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120467877 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
120467877 (atl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GBP
GBP_C
DUF2207_C
DUF3040
Motif
Other DBs
NCBI-GeneID:
120467877
NCBI-ProteinID:
XP_039512370
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MARDKKDRDSWGSLGDKNVYDWSSEEEETDGRARPVQVLVVKDDHSFELDEAALSKILLA
EELRDREVVAISVAGAFRKGKSFLMDFMLRYMYSQASEQWLGDPEEPLTGFSWRGGSERE
TTGIQIWSEVFLVDKPDGSKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNIS
QNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFPYGQEGGMKFLEKR
LKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPHFDGRLREIDQEFTNNLKV
LVPWLLRPKNLDVKEINGSKITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNLAA
VAAAKDLYNRKMEVVSGGDRPFLAPSELQARHLDIREESLALFRSVKKMGGEEFSRRYLL
QLETEIDESFVQYIKHNDSKNIFHAARTPATLFVVIFVMYVAAGITGFVGVDVIASVCNM
VLGFALITLCTWAYIRYSGEYRELGAVIDQVAGALWDQGSTNEALYKLYSVAANHRQLYN
HAFPGHQTGQPPEQDKKQN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagacaaaaaggacagagacagctgggggtctttaggggacaagaacgtgtat
gactggagctcagaggaggaggagacagacggacgggcccgtccagtgcaggtgttggtg
gtgaaggatgaccactcgtttgagctggacgaggcggcgctcagtaagatcctgctggct
gaagagctcagagaccgagaggtggtggccatctccgtggcaggagcctttcgcaagggc
aaatccttcctcatggacttcatgctgcgttacatgtacagccaggccagtgagcagtgg
ctgggtgaccctgaggaaccgctgacgggattctcatggagaggagggtcagagcgggag
accactgggattcagatctggagtgaggtctttctggtggacaagccagatggcagcaag
gtggcagtgctgctaatggacacacaggggaccttcgacagccagtccactctccgtgac
tcagctactgtatttgccctcagtactatgatcagctctatgcaggtatataacatatct
cagaacgttcaggaagatgatcttcagcatctgcagcttttcactgaatatggcagactg
gcaatggaagaaacattcctcaaaccatttcagtcaatgatctttctggtgcgggactgg
agctttccatacgagtttccctacggacaggaaggggggatgaaattcctggagaaaaga
ttaaagatctcagagaatcaacacgaggagctgcagaacgtaaggaaacacattcattcc
tgcttcaccaacatctcctgcttcctcatgccacacccgggactcaaggtggccacaaac
ccacactttgatggcagattgagggagatcgatcaagagtttaccaataatctcaaagtg
cttgttccatggttactacgccccaaaaacctggacgtgaaagaaataaatggaagcaaa
atcacctgtcgtggactcctggaatacttcaaggcatacatcaagatttaccagggagag
gagctgccacatccaaaatctatgttacaggccacagcagaagccaataatctggccgca
gtggctgcagctaaagatctttacaacaggaagatggaggtggtgagcgggggagatcgg
cctttcctcgccccaagcgagctccaggcacgtcacttagacatccgcgaggagtcactg
gcgttgtttcgcagtgtgaagaaaatgggcggggaggagttcagccggcggtacctgctg
cagctggagacggagatcgacgagtcgttcgtgcagtacatcaaacacaacgactccaag
aacatcttccacgcggcacgcacccccgcgacgctgttcgtggtgatctttgtgatgtac
gtggccgcagggatcacggggttcgtgggcgtggacgtcatcgcaagcgtctgcaacatg
gtgctgggcttcgcgctcatcactctgtgcacatgggcgtacatccgctactcaggagaa
tacagagaactgggcgcagtcattgaccaggtggccggagcgctgtgggatcagggaagc
acaaatgaggctctgtataagctgtacagtgtagcagcaaaccacaggcagttgtataac
cacgccttccccggacaccagaccggtcagccgcctgagcaggacaagaaacaaaactga
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