Pimephales promelas (fathead minnow): 120467910
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Entry
120467910 CDS
T08155
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120467910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120467910
03036 Chromosome and associated proteins [BR:
pprm03036
]
120467910
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120467910
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120467910
Chromatin remodeling factors
BAF complex
120467910
PBAF complex
120467910
GBAF(ncBAF) complex
120467910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
120467910
NCBI-ProteinID:
XP_039512432
LinkDB
All DBs
Position
Unknown
AA seq
1622 aa
AA seq
DB search
MSTPEPPLGGTPCAGPSPGPGPSPGAVLGSGLSPGSSHNMMGPSPGPAPSTGHSFPQQTS
AGYSQETLHQMHKPVEESLSEDARFSQMKVVPMRMTRPGSPMDQHSQGYPSPLGASEHVS
SPMSTSGPPSGPLLSTGSSSASLEAVDGQNRPGTQSAASVSGTGVSSSSAPPTPFNQSQL
HQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPMPGMPPGPSLTSLTPGGGGGSAGFSRGH
VCAGCSAGMVGPNMPPPGPSGIQAGVQGQNHNGPPKPWAEGPMVNAATPSNAPQKLMAPQ
PTGRPSPAPPSVPPAASPVMPPQTQSPGHLTHPSQPNTMVPLHQKQNRITPVQKPCGLDP
VEILQEREYRLEARITHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVC
MRRDTALETSLDSKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHA
KDFKEYHRSITAKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLID
QKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKKKKKKKKKLENAEGAAGALGP
DGEPLDETSQMSDLPVKVIHVDSGKILTGVDAPKAGQLDTWLEMNPGYEVAPRSDSEDSG
SEEDEEEEEEPPQLLSSQTPGEEKKKIPDPDSEDVSEVDVRHIIEHAKQDVDDEYGSAAF
ARGLQSYYAVAHAVTERVDKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLG
KTIQTIALITYLMENKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAF
VPQLRSGKFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAP
RRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILI
IRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEK
DKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGADLYRASGKFEV
LDRILPKLRASNHKVLLFCQMTSLMTIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFND
PASQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL
CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVRSITP
SAYSRRQTEEDEVPDDETVNQMIARSEDEFDQFMRMDLDRRREEARNPKRKPRLMEEDEL
PTWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEDGTLDEIEEE
VRHKKTTRKRRRDRDPDVIPSTSGARGARERDDDSKRQKKRGRPPSEKLSPNPPSLTKKM
KKIVDAVIKYKENNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLS
DLERDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSLCQKIEREEESDGEDSEEDEEDEG
SDSETRSVKVKIKLSRKDRSAERGRGRRRTARTRAKPVVSDDDTDEEQEEDRSNSVSEEE
QG
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccagagcccccgttgggtgggactccctgtgcggggccttcgccgggcccg
ggcccgtctcccggagccgttctgggttcaggactgtcccctggatcctcacacaacatg
atgggccccagtcccggaccggccccttccacgggacactcctttcctcagcaaacatct
gcgggatacagccaggagactttgcatcagatgcacaagccggtggaggagagcctttca
gaagacgctcgcttcagtcagatgaaggtggtaccgatgaggatgacccgtcctgggagc
ccgatggaccagcactcgcaaggatacccgtctccgctgggcgcttcagaacacgtgtcc
agtcccatgtccaccagcgggcctccatcaggtcctctcctgtccaccggctcgagctcg
gcttcgctggaggctgtggacggccaaaaccgcccgggaacccaaagcgccgcgtcagtg
tccggcaccggcgtctccagctcctcggcccccccgacacccttcaaccagagccagctc
caccagctgcgcgcgcagatcatggcctataagatgctggcgcgcgggcagcctctccca
gaacacctgcagatggcagtgcagggcaagcggcccatgccaggcatgccaccgggaccg
tccctgaccagcttaacaccggggggaggaggagggagcgccggcttcagcagaggacat
gtttgtgccggttgctctgcagggatggtgggacccaacatgcctcctcctggaccttca
ggaatccaagctggtgttcagggccagaaccacaacggaccccccaaaccctgggctgaa
ggtccgatggtgaacgcagccactccttcgaatgctcctcagaagctgatggctcctcag
cccacgggacgcccttcaccggctccaccgtcggtgccaccggccgcctcgccagtcatg
ccaccgcaaacccaatcgccaggtcacctgacacacccgtcccagcccaacaccatggtg
ccgctgcaccagaagcagaaccgcatcacacccgtccagaagccttgcggcctggacccg
gttgagatactgcaggagagagagtacaggcttgaagctcgtatcactcaccgtattcag
gagctggagaatctcccggggtctttagctggagatctgcggaccaaagctactattgag
ctcaaagctctcagactgctcaacttccagagacagttgcgtcaggaggtggtggtttgc
atgagacgtgacacggctttagaaacatcactggactccaaggcctataaacgcagcaag
agacagtcgttacgcgaggcgcggatcacagagaaactcgagaaacagcagaagatcgaa
caggaacgcaaacgcagacagaaacaccaggagtatctcaacagtatcctgcaacacgcc
aaagacttcaaggaatatcatcgttccatcacagcgaagatccagaaactgaccaaagcc
gtggccacgtatcacgctaacactgagcgcgagcagaagaaggagaacgagcgcatcgag
aaagagcgaatgagacgcttgatggctgaggatgaggagggttacaggaagctcatcgac
cagaagaaggacaagcgtctggcgtacctcctccagcagacggacgagtacgtggccaat
ctgacggagctggtgcgcgcccataaagcggtgcaggccctgaaggagaagaagaagaag
aaaaagaagaagaagaagaagctggagaacgccgagggagccgccggggctctgggacca
gatggagagcccctggatgagacgagtcagatgagtgatcttccagtgaaggtgatccac
gtggacagtgggaagattctgacgggagtggacgctcctaaagctggacagctggacacg
tggctggagatgaaccctggatacgaggtcgcgccgcgctcggacagcgaggattctggg
tcggaggaggacgaggaagaggaagaggaacctcctcagcttctgtcctctcagactcct
ggagaggagaagaagaagatccccgaccccgacagcgaggacgtgtccgaggtcgacgtg
cgtcacatcatagaacatgctaaacaggacgtggatgatgagtacggtagcgcagcgttc
gcgcgcgggttgcagtcgtattacgccgtggctcacgctgttaccgagcgagtggacaaa
cagtcgtctctgctgatcaacggtcaactcaagcaataccagatcaagggtttggagtgg
ctggtgtctctgtataacaataatctgaacgggatcctggcggatgagatgggtttgggc
aaaaccatccaaaccatcgcgctcatcacatacctgatggagaacaagcgcctgaacgga
ccctacctcatcatcgtgccgctctcaactctgtccaactgggtctacgagtttgataaa
tgggcgccgtctgtcgtcaaagtctcgtacaagggatctcccgctgctagaagagccttc
gtgccacagctacgcagcggcaagttcaacgtcctgctcactacttacgaatacatcatc
aaagacaagcaggtgctggccaagattcgctggaagtacatgatcgtggacgaaggtcat
cgcatgaagaaccaccactgtaagctgacgcaggtgttgaacacacactatctggcgccg
cggcgtgtgttgctgacggggacgccgcttcagaacaagctccccgagctctgggcgctg
ctcaacttcctgctgcccaccatcttcaagagctgcagcacgtttgagcagtggttcaac
gctcccttcgccatgaccggagagaaggtggacctgaacgaggaggagacgatcctgatc
atccggcgcctgcataaagtgctccggccgttcctgttgcgaagactgaagaaagaagtc
gaggcgcagctgccggagaaggtggagtacgtgatcaagtgtgacatgtcggctcttcag
agggttttgtaccgacacatgcaggccaaaggagttctgctcaccgacggctccgagaag
gacaagaagggtaaaggcggcactaagactctgatgaacaccatcatgcagctgaggaag
atctgtaatcatccctacatgttccagcaaattgaggagtcgttttcggagcatctgggc
ttctctggcgggatagttcaaggggctgacctgtaccgggcctcagggaagtttgaggtg
ctggatcgtattttgcccaagttacgggcgtccaatcacaaagtgcttctcttctgccag
atgacgtcactgatgaccataatggaggattattttgcgtaccgtagctttaaatatctt
cgtctggatggcacgaccaaagcagaggatcgtgggatgctgctgaagaccttcaacgat
ccggcctctcagtacttcatattcctgttgagcaccagagccggaggactgggactcaat
ctacagagcgccgacaccgtcatcatattcgacagcgactggaacccgcatcaggacctc
caggcgcaggaccgagcccatcgcatcggacagcagaacgaggtgcgcgtcctgcgtctc
tgtaccgtcaacagcgtggaagaaaagatcctagcggccgctaagtacaagctgaatgtc
gaccagaaggtgatccaggccggcatgttcgaccagaagtcgtcgagtcatgagcgccga
gcgttcctgcaggccattctggagcacgaggagcaggacgaggtcaggagtatcactcct
tctgcgtatagtaggcgacaaacagaagaagatgaagtgccggacgacgagaccgtaaat
cagatgatcgctcgcagcgaagacgagttcgaccagttcatgcgcatggatctggaccgc
cggcgcgaggaggctcgtaaccccaagcggaagccccgtctcatggaggaggacgagctg
cccacgtggatcatgaaagatgacgccgaggtggaaaggctgacctgtgaggaagaggag
gagaagatgttcggccgcggctcccgccagaggaaagaggtcgactacagcgactcgctc
accgagaaacagtggctgaaggctattgaggacgggactctggacgagatcgaggaggag
gtgcggcacaagaagacgacccggaagaggaggcgggaccgggatccggacgtgattccc
tccacctcaggcgcgagaggagcgagggaacgagacgacgacagcaaacgacagaagaaa
cgagggcgtccgccatcagagaagctctcgcccaaccctccctctctcaccaagaagatg
aagaagatcgtggacgcggtgatcaaatacaaggagaataacgggcgtcagttgagcgag
gtgttcatccagctgccgtcacggaaggagcttcccgagtattacgagctgatccgcaaa
cctgtggacttcaggaagatcaaggagcgcatccggagtcaccggtaccgaagcctcagt
gatctggagagagacgtgatgctgctgtgtcagaacgctcaaaccttcaacctcgaggga
tcactgatctacgaggactctatcgtgctgcagtcggtcttcaccagcctgtgtcagaag
atcgagagagaggaagagagtgatggagaggacagtgaggaagatgaagaggatgaaggc
tcggattcagagactcggtcggtgaaggtgaagattaaactgagccgtaaggacagaagt
gcagagcgaggaagaggacgcaggagaaccgccagaacccgcgctaaacctgtcgttagt
gatgatgacactgatgaggagcaggaggaggatcgctccaacagcgtcagtgaggaagag
cagggatga
DBGET
integrated database retrieval system
