Pimephales promelas (fathead minnow): 120467923
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Entry
120467923 CDS
T08155
Name
(RefSeq) homeobox protein TGIF2 isoform X1
KO
K19553
homeobox protein TGIF2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120467923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120467923
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120467923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120467923
NCBI-ProteinID:
XP_039512454
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MKPNKRAFDEDQNGDTEFSAMSDSDPCEDDGYPLNLSTNGRRSGSSAKRRRRGNLPKEAV
QVLRDWLYEHRFNAYPSEQEKLSLSGQTHLSVSQICNWFINARRRLLPDLLRKDGKDPTQ
FTMSRRAGKTERSASPESPASSTRPSVICPAPTLDLRLLGNTATAILAGAGCLSSSGGHD
GGVQALMQLDTRGLLRREGLTGFRSEDHYVTTIPFASTLGAPSPSGVLFNTPPPTPPELC
AQDFSDLKLLVDAALQRAAEQENCRPKEQPDEAREESVLTSTDESNPGPALMESATLPVS
VPVVSRSFQGLPVDLSSAGKSVTEPAGFTSAGMWGVRQPGPLASTWVSQYVRNTVTEAVN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaacaaaagagcttttgatgaggatcagaacggagacacagagttttcagcc
atgtcggacagtgacccgtgtgaagacgacggttaccctctcaacctgtccaccaatggc
aggagaagcggctcttcggccaaacgccgccggcgtggaaacctccccaaagaggcggtt
caggttctgagagactggctttatgagcatcgcttcaacgcgtatccgtcagagcaggag
aagctgagcctgtctggacagacgcatctgtccgtatcgcagatctgtaactggttcata
aacgcccgccggaggctcctgccggacctgctcaggaaagacggcaaagaccccactcag
tttacaatgtcacgtcgcgccggcaaaaccgagaggtccgcctccccggaaagccccgcc
tcttcgacccgcccctcagtcatttgccccgccccaacattggacttgaggcttttgggc
aacaccgcgactgcaattttggccggagccggttgcttgtcgtcgtccggcggtcacgac
ggcggcgttcaggctctgatgcagctggacacacgaggtctcctgaggcgagaaggtcta
accggtttccggagtgaagatcattacgtgacgaccatcccgttcgcttctaccctggga
gcgccgagcccgagtggggtcctgttcaacacgccacctccgaccccgccagagctgtgc
gcgcaagacttcagcgatctgaagctgctagtggacgcggccctgcaacgcgcagccgag
caggagaactgcagaccgaaagagcaacccgacgaagctcgtgaggagtccgttttgact
tccacggacgaatccaatcctggaccggccttgatggagagcgcaacattaccagtatcg
gttcctgtcgtgagccgctcgtttcaaggccttcccgtggatctgagctcagccggcaag
agcgttacagaacccgccggcttcacgtctgctgggatgtggggcgtccggcaacccggt
ccactcgcgagcacgtgggtttctcagtacgtgcgtaatacggtcacggaagcggtcaac
tga
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